|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2701374..2702350+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007522-T1 ID=KJC3_007522-T1|Name=KJC3_007522-T1|organism=Aspergillus niger KJC3|type=mRNA|length=977bp|location=Sequence derived from alignment at ch5:2701374..2702350+ (Aspergillus niger KJC3)
CATTCTTTTGCTGCATTACCAATCAACTACTTTCCAATTCCCCAGGATTT
GGCTCTTAAGCTCTGTCACAGACATTGCTTCCTCGTATCTTTGCTCGGCT
CGGAGTTCAGACTATTCCGTGTACATACTACTCTTCCGAATTGACTTGAT
ACTACTCTGCCCTACTTCCTACTTCTTCTCCGCAACGGGTCTGAATATCC
TCATCCTCCACCAGCATCAATCACCACCTACATAGACCACAATGGCAGAC
ACAACGACACCACCAGAAATGCCAAAACATCTCTTCATTCACCAACAACA
GCAACAACCCGCTACACTTTCCTCCTCTACCCAACAACAAGCCTCAGCAA
CAGCGACAGCGGCAAAAGATGACTCCGTCCCCGCAGGCATGACCAAACTC
CCCAACGGAGTCATCCTCGACAAAGACGGGAAGCCGTACGAACTCCTCTC
CTCTCCCCATACTCCATATCCCCCTTACTAACGGAATTACCAACAACAGA
TGTCGCCTCTGCACCTCCGCCGCTTCGTGGCGCGCCCTCACCAAACAAGC
CAAATCCACCCCCTCCACCACCACAAGCACCGCCAGCACCATCCCGAAGA
CCCTCGCCACCACTCCAGGCTACACTGACTGCCCACCAGACTCGGAAGCC
CTCGGCCGTTCCACCTGGACCTTCCTGCACTCGTTGACAGCCTCGTACCC
CGCGCAAGCGTCAAGCGAACAACAATCCGAGATGCGCCAGTTCCTGGGGA
TATTCTCGAAGCTGTATCCATGCTGGGTGTGTGCGGAGGACTTCCGGGCT
TGGATGGCGGAGCCGAGTGGGGAGAATCAGCCGAGGTTGGGTGGACGGAA
GGAGTTCGGGGATTGGATGTGTAGGGCGCATAATGAGGTGAATCGCAAGT
TGGGGAAGAGTGAGTTTGATTGTCGGTTTTGGGAGGAGAGGTGGAGGAAG
GGGTGGGGGGATGGAAGGTGTGAGTAA back to topCoding sequence (CDS) from alignment at ch5:2701374..2702350+ >KJC3_007522-T1 ID=KJC3_007522-T1|Name=KJC3_007522-T1|organism=Aspergillus niger KJC3|type=CDS|length=1344bp|location=Sequence derived from alignment at ch5:2701374..2702350+ (Aspergillus niger KJC3)
ATGGCAGACACAACGACACCACCAGAAATGCCAAAACATCTCTTCATTCA
CCAACAACAGCAACAACCCGCTACACTTTCCTCCTCTACCCAACAACAAG
CCTCAGCAACAGCGACAGCGGCAAAAGATGACTCCGTCCCCGCAGGCATG
ACCAAACTCCCCAACGGAGTCATCCTCGACAAAGACGGGAAGCCATGTCG
CCTCTGCACCTCCGCCGCTTCGTGGCGCGCCCTCACCAAACAAGCCAAAT
CCACCCCCTCCACCACCACAAGCACCGCCAGCACCATCCCGAAGACCCTC
GCCACCACTCCAGGCTACACTGACTGCCCACCAGACTCGGAAGCCCTCGG
CCGTTCCACCTGGACCTTCCTGCACTCGTTGACAGCCTCGTACCCCGCGC
AAGCGTCAAGCGAACAACAATCCGAGATGCGCCAGTTCCTGGGGATATTC
TCGAAGCTGTATCCATGCTGGGTGTGTGCGGAGGACTTCCGGGCTTGGAT
GGCGGAGCCGAGTGGGGAGAATCAGCCGAGGTTGGGTGGACGGAAGGAGT
TCGGGGATTGGATGTGTAGGGCGCATAATGAGGTGAATCGCAAGTTGGGG
AAGAGTGAGTTTGATTGTCGGTTTTGGGAGGAGAGGTGGAGGAAGGGGTG
GGGGGATGGAAGGTGTGAGTAAATGGCAGACACAACGACACCACCAGAAA
TGCCAAAACATCTCTTCATTCACCAACAACAGCAACAACCCGCTACACTT
TCCTCCTCTACCCAACAACAAGCCTCAGCAACAGCGACAGCGGCAAAAGA
TGACTCCGTCCCCGCAGGCATGACCAAACTCCCCAACGGAGTCATCCTCG
ACAAAGACGGGAAGCCATGTCGCCTCTGCACCTCCGCCGCTTCGTGGCGC
GCCCTCACCAAACAAGCCAAATCCACCCCCTCCACCACCACAAGCACCGC
CAGCACCATCCCGAAGACCCTCGCCACCACTCCAGGCTACACTGACTGCC
CACCAGACTCGGAAGCCCTCGGCCGTTCCACCTGGACCTTCCTGCACTCG
TTGACAGCCTCGTACCCCGCGCAAGCGTCAAGCGAACAACAATCCGAGAT
GCGCCAGTTCCTGGGGATATTCTCGAAGCTGTATCCATGCTGGGTGTGTG
CGGAGGACTTCCGGGCTTGGATGGCGGAGCCGAGTGGGGAGAATCAGCCG
AGGTTGGGTGGACGGAAGGAGTTCGGGGATTGGATGTGTAGGGCGCATAA
TGAGGTGAATCGCAAGTTGGGGAAGAGTGAGTTTGATTGTCGGTTTTGGG
AGGAGAGGTGGAGGAAGGGGTGGGGGGATGGAAGGTGTGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016972 | thiol oxidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007522-T1.utr5p1 | KJC3_007522-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036774 |
| DBxref | InterPro:IPR017905 |
| DBxref | PFAM:PF04777 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2701374..2702350 + |
|
