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KJC3_007527-T1, KJC3_007527-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007527-T1
Unique NameKJC3_007527-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2712538..2714748-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007527-T1 ID=KJC3_007527-T1|Name=KJC3_007527-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2211bp|location=Sequence derived from alignment at ch5:2712538..2714748- (Aspergillus niger KJC3)
CAGTCAGTGAATTCAGGTCTCGTGCCACCACGAGCTGGACACGCTGCTTG
TGCATGTCGTCCTAACCTACTGGGGTGGGTAAATGCTGGATTCCCTTTGC
TTGAATTCCGGGGAGTCCGGAGGTGGACCGGCGGGTGATCGACTCGGCAT
TGGCCATCGAGACGCCGCTTGCCCCTCTCGGTCTCTTCCCCCCCTATCGC
TGATGTGGACTGATGCCCTGTCGTGCATTGGACGTGAATAGCTAATCCTT
CGTGTGTCTGGGACTTGCTAGCATCCTGCTCTCTTTCGCAAGGCAATATT
CACAATATTCACCACCTGCCTCTCCTGTCCCGAAATTCAAGCTCCAAACT
TCTGGTGCTTCGACTGCCAAAAAAAGTGAAGCGAGCTCGGGTCGACGTCA
TCAATACATCTCATCCGCTCTGTTCTTCCAACTCCAGGACGCCGTCGACT
TGCATCTTCTCGTCCTTTCCCTTCCCTCTTATACTTTCTACCATCATCTA
AACCATCGCCATTATGTCGATGCCTGAGTTTGACCCGGCCCGTCGGCCCT
CTCAGTCCGAGAACCAAACCATTCTCAAGTCCGAAATCCCGTTGAAGGAA
CGGTTCTTCCGCTATTTTCAGCATGAGATCACTGGTATGATTGAGCTGGT
CCAGCTGATTACCTATGCTCTTTCCTCTTTTCAGAAGAGAGGAGTCTGAC
GCCTGTTCTTCCTGTAGCGCTCCAGGAACAGATGGATCGGCTGGCAGACA
CCTCGTTAGTGGGAGGAGAACGGACGGACGCAACCGATCACTGTCTGGCC
GGCATTGCGCGCTTGTCCAACGAGGTCAAGGACGCGGCCAGCTATATCCC
AACCTATGACCAGCGGATATATGCTGAGGTACACACTCTCGCGCCTGAGT
ACCGCTTGACATATTGACTTTTGCAGGCCATCAAAGCTCTGCAGGACAAA
CTCGTCGAAACCCGGGCTGCAGTCGTGCCACGACCCAAGTTTAGCTTCAA
GACCAAGAAGAATGCCTCCGCCATATCTTTGTCCGATGCAGCGCATCTTG
CCGCTCAAGGTCGACGCAGTATACCTGGGTTCCCCTCCCCTGACACATCT
TCAGTCAGCTCGTCCGCGACACAAACCCCCATGTATCCGTCAACGCCTCT
GAACGAACCCGACAACCGCCTTCATCTACAAAGACCGGAGCTTGCCCCAA
CCTCTATCCCTGCCTTTACAATGGACGAAGACGAGGACAAGCCCAAGTCA
GACGTAGGGGCTGGATTCGCCGCGACGGCGGTATCCTCAGTGTCCGTGAA
CAACCACCATAACCTGCACATCATGCTGCCGTCCTCAGGCTCGACCGCAA
CTGTGCCCGCGTCCATCACCCATCTCCGTCACTGTGTAGTCGACATGTCC
ATTCCCACTGCCAACGGAAAGCCATACACCAGTCTTACTATCAAGAGCGT
CAAAGAGAGTCTGCTCGTGTGTGGCCAGATCAACGGCCCAGCCCATATCA
CTGGGGTAGAGAACAGCATTCTTGTGATTGACTGTCGGCAGTTCCGGATG
CACGACTGCTCTAATGTGGACGTCTACCTCAGCTGCTCCAGCAACCCGAT
CATCGAGGACTGCAGCAATGTCCGATTCGGTCGGAAACCCCGTGTTTACG
TAGGTGGACACCCTGCAAATATATTCCGCTTTTACTAACTGAAAACAAAA
CTAGACGCTCGATCACGATTGCCCCGATGACGAAGACCACTGGAGCCAGG
TCGAAGACTTCAAATGGATCAAGCCGGAACCCAGTCCCAACTGGAGCCTG
CTGGATGCCGAAGACGCCGTGCCGGAAGAAGTCTGGGCGGAGATCGTACC
GGGCGGACCAGGCTGGTCGCTGGATGATATTCTGCGAGCGATCAATATTT
CATCTCATTAAACGATCGCTTTATCGGTCACGAGCTGGTGGGGTTGGCGT
CCGGTTTTACGATTGTCAGTTGTGATTACTGTGCATTTTTAAATGCGAGG
GGGACAGGCTAGGTAAACATATCCTATGTACCGGACTGGGTTCCGCGACG
CTAGTGTTGCTTCTGAAGTACTTCTCTCTTCTCTTGAGTGGTGGTCGATT
TATGGCAACTGGGTGCTATACCTGGTGAAGTCGCACACCACGGGTTTATC
TATTAGGATTTCTTAGTATCCACCTCTCATATCTCAATTTAACTATTCCA
GTTTATTCGGT
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Coding sequence (CDS) from alignment at ch5:2712538..2714748-

>KJC3_007527-T1 ID=KJC3_007527-T1|Name=KJC3_007527-T1|organism=Aspergillus niger KJC3|type=CDS|length=4848bp|location=Sequence derived from alignment at ch5:2712538..2714748- (Aspergillus niger KJC3)
ACGCTCGATCACGATTGCCCCGATGACGAAGACCACTGGAGCCAGGTCGA
AGACTTCAAATGGATCAAGCCGGAACCCAGTCCCAACTGGAGCCTGCTGG
ATGCCGAAGACGCCGTGCCGGAAGAAGTCTGGGCGGAGATCGTACCGGGC
GGACCAGGCTGGTCGCTGGATGATATTCTGCGAGCGATCAATATTTCATC
TCATTAAGCCATCAAAGCTCTGCAGGACAAACTCGTCGAAACCCGGGCTG
CAGTCGTGCCACGACCCAAGTTTAGCTTCAAGACCAAGAAGAATGCCTCC
GCCATATCTTTGTCCGATGCAGCGCATCTTGCCGCTCAAGGTCGACGCAG
TATACCTGGGTTCCCCTCCCCTGACACATCTTCAGTCAGCTCGTCCGCGA
CACAAACCCCCATGTATCCGTCAACGCCTCTGAACGAACCCGACAACCGC
CTTCATCTACAAAGACCGGAGCTTGCCCCAACCTCTATCCCTGCCTTTAC
AATGGACGAAGACGAGGACAAGCCCAAGTCAGACGTAGGGGCTGGATTCG
CCGCGACGGCGGTATCCTCAGTGTCCGTGAACAACCACCATAACCTGCAC
ATCATGCTGCCGTCCTCAGGCTCGACCGCAACTGTGCCCGCGTCCATCAC
CCATCTCCGTCACTGTGTAGTCGACATGTCCATTCCCACTGCCAACGGAA
AGCCATACACCAGTCTTACTATCAAGAGCGTCAAAGAGAGTCTGCTCGTG
TGTGGCCAGATCAACGGCCCAGCCCATATCACTGGGGTAGAGAACAGCAT
TCTTGTGATTGACTGTCGGCAGTTCCGGATGCACGACTGCTCTAATGTGG
ACGTCTACCTCAGCTGCTCCAGCAACCCGATCATCGAGGACTGCAGCAAT
GTCCGATTCGGTCGGAAACCCCGTGTTTACCGCTCCAGGAACAGATGGAT
CGGCTGGCAGACACCTCGTTAGTGGGAGGAGAACGGACGGACGCAACCGA
TCACTGTCTGGCCGGCATTGCGCGCTTGTCCAACGAGGTCAAGGACGCGG
CCAGCTATATCCCAACCTATGACCAGCGGATATATGCTGAGATGTCGATG
CCTGAGTTTGACCCGGCCCGTCGGCCCTCTCAGTCCGAGAACCAAACCAT
TCTCAAGTCCGAAATCCCGTTGAAGGAACGGTTCTTCCGCTATTTTCAGC
ATGAGATCACTGACGCTCGATCACGATTGCCCCGATGACGAAGACCACTG
GAGCCAGGTCGAAGACTTCAAATGGATCAAGCCGGAACCCAGTCCCAACT
GGAGCCTGCTGGATGCCGAAGACGCCGTGCCGGAAGAAGTCTGGGCGGAG
ATCGTACCGGGCGGACCAGGCTGGTCGCTGGATGATATTCTGCGAGCGAT
CAATATTTCATCTCATTAAGCCATCAAAGCTCTGCAGGACAAACTCGTCG
AAACCCGGGCTGCAGTCGTGCCACGACCCAAGTTTAGCTTCAAGACCAAG
AAGAATGCCTCCGCCATATCTTTGTCCGATGCAGCGCATCTTGCCGCTCA
AGGTCGACGCAGTATACCTGGGTTCCCCTCCCCTGACACATCTTCAGTCA
GCTCGTCCGCGACACAAACCCCCATGTATCCGTCAACGCCTCTGAACGAA
CCCGACAACCGCCTTCATCTACAAAGACCGGAGCTTGCCCCAACCTCTAT
CCCTGCCTTTACAATGGACGAAGACGAGGACAAGCCCAAGTCAGACGTAG
GGGCTGGATTCGCCGCGACGGCGGTATCCTCAGTGTCCGTGAACAACCAC
CATAACCTGCACATCATGCTGCCGTCCTCAGGCTCGACCGCAACTGTGCC
CGCGTCCATCACCCATCTCCGTCACTGTGTAGTCGACATGTCCATTCCCA
CTGCCAACGGAAAGCCATACACCAGTCTTACTATCAAGAGCGTCAAAGAG
AGTCTGCTCGTGTGTGGCCAGATCAACGGCCCAGCCCATATCACTGGGGT
AGAGAACAGCATTCTTGTGATTGACTGTCGGCAGTTCCGGATGCACGACT
GCTCTAATGTGGACGTCTACCTCAGCTGCTCCAGCAACCCGATCATCGAG
GACTGCAGCAATGTCCGATTCGGTCGGAAACCCCGTGTTTACCGCTCCAG
GAACAGATGGATCGGCTGGCAGACACCTCGTTAGTGGGAGGAGAACGGAC
GGACGCAACCGATCACTGTCTGGCCGGCATTGCGCGCTTGTCCAACGAGG
TCAAGGACGCGGCCAGCTATATCCCAACCTATGACCAGCGGATATATGCT
GAGATGTCGATGCCTGAGTTTGACCCGGCCCGTCGGCCCTCTCAGTCCGA
GAACCAAACCATTCTCAAGTCCGAAATCCCGTTGAAGGAACGGTTCTTCC
GCTATTTTCAGCATGAGATCACTGACGCTCGATCACGATTGCCCCGATGA
CGAAGACCACTGGAGCCAGGTCGAAGACTTCAAATGGATCAAGCCGGAAC
CCAGTCCCAACTGGAGCCTGCTGGATGCCGAAGACGCCGTGCCGGAAGAA
GTCTGGGCGGAGATCGTACCGGGCGGACCAGGCTGGTCGCTGGATGATAT
TCTGCGAGCGATCAATATTTCATCTCATTAAGCCATCAAAGCTCTGCAGG
ACAAACTCGTCGAAACCCGGGCTGCAGTCGTGCCACGACCCAAGTTTAGC
TTCAAGACCAAGAAGAATGCCTCCGCCATATCTTTGTCCGATGCAGCGCA
TCTTGCCGCTCAAGGTCGACGCAGTATACCTGGGTTCCCCTCCCCTGACA
CATCTTCAGTCAGCTCGTCCGCGACACAAACCCCCATGTATCCGTCAACG
CCTCTGAACGAACCCGACAACCGCCTTCATCTACAAAGACCGGAGCTTGC
CCCAACCTCTATCCCTGCCTTTACAATGGACGAAGACGAGGACAAGCCCA
AGTCAGACGTAGGGGCTGGATTCGCCGCGACGGCGGTATCCTCAGTGTCC
GTGAACAACCACCATAACCTGCACATCATGCTGCCGTCCTCAGGCTCGAC
CGCAACTGTGCCCGCGTCCATCACCCATCTCCGTCACTGTGTAGTCGACA
TGTCCATTCCCACTGCCAACGGAAAGCCATACACCAGTCTTACTATCAAG
AGCGTCAAAGAGAGTCTGCTCGTGTGTGGCCAGATCAACGGCCCAGCCCA
TATCACTGGGGTAGAGAACAGCATTCTTGTGATTGACTGTCGGCAGTTCC
GGATGCACGACTGCTCTAATGTGGACGTCTACCTCAGCTGCTCCAGCAAC
CCGATCATCGAGGACTGCAGCAATGTCCGATTCGGTCGGAAACCCCGTGT
TTACCGCTCCAGGAACAGATGGATCGGCTGGCAGACACCTCGTTAGTGGG
AGGAGAACGGACGGACGCAACCGATCACTGTCTGGCCGGCATTGCGCGCT
TGTCCAACGAGGTCAAGGACGCGGCCAGCTATATCCCAACCTATGACCAG
CGGATATATGCTGAGATGTCGATGCCTGAGTTTGACCCGGCCCGTCGGCC
CTCTCAGTCCGAGAACCAAACCATTCTCAAGTCCGAAATCCCGTTGAAGG
AACGGTTCTTCCGCTATTTTCAGCATGAGATCACTGACGCTCGATCACGA
TTGCCCCGATGACGAAGACCACTGGAGCCAGGTCGAAGACTTCAAATGGA
TCAAGCCGGAACCCAGTCCCAACTGGAGCCTGCTGGATGCCGAAGACGCC
GTGCCGGAAGAAGTCTGGGCGGAGATCGTACCGGGCGGACCAGGCTGGTC
GCTGGATGATATTCTGCGAGCGATCAATATTTCATCTCATTAAGCCATCA
AAGCTCTGCAGGACAAACTCGTCGAAACCCGGGCTGCAGTCGTGCCACGA
CCCAAGTTTAGCTTCAAGACCAAGAAGAATGCCTCCGCCATATCTTTGTC
CGATGCAGCGCATCTTGCCGCTCAAGGTCGACGCAGTATACCTGGGTTCC
CCTCCCCTGACACATCTTCAGTCAGCTCGTCCGCGACACAAACCCCCATG
TATCCGTCAACGCCTCTGAACGAACCCGACAACCGCCTTCATCTACAAAG
ACCGGAGCTTGCCCCAACCTCTATCCCTGCCTTTACAATGGACGAAGACG
AGGACAAGCCCAAGTCAGACGTAGGGGCTGGATTCGCCGCGACGGCGGTA
TCCTCAGTGTCCGTGAACAACCACCATAACCTGCACATCATGCTGCCGTC
CTCAGGCTCGACCGCAACTGTGCCCGCGTCCATCACCCATCTCCGTCACT
GTGTAGTCGACATGTCCATTCCCACTGCCAACGGAAAGCCATACACCAGT
CTTACTATCAAGAGCGTCAAAGAGAGTCTGCTCGTGTGTGGCCAGATCAA
CGGCCCAGCCCATATCACTGGGGTAGAGAACAGCATTCTTGTGATTGACT
GTCGGCAGTTCCGGATGCACGACTGCTCTAATGTGGACGTCTACCTCAGC
TGCTCCAGCAACCCGATCATCGAGGACTGCAGCAATGTCCGATTCGGTCG
GAAACCCCGTGTTTACCGCTCCAGGAACAGATGGATCGGCTGGCAGACAC
CTCGTTAGTGGGAGGAGAACGGACGGACGCAACCGATCACTGTCTGGCCG
GCATTGCGCGCTTGTCCAACGAGGTCAAGGACGCGGCCAGCTATATCCCA
ACCTATGACCAGCGGATATATGCTGAGATGTCGATGCCTGAGTTTGACCC
GGCCCGTCGGCCCTCTCAGTCCGAGAACCAAACCATTCTCAAGTCCGAAA
TCCCGTTGAAGGAACGGTTCTTCCGCTATTTTCAGCATGAGATCACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000902cell morphogenesis
Vocabulary: Molecular Function
TermDefinition
GO:0015631tubulin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007527KJC3_007527Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007527-T1KJC3_007527-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007527-T1.cdsKJC3_007527-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007527-T1.utr3p1KJC3_007527-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007527-T1.exon5KJC3_007527-T1.exon5Aspergillus niger KJC3exon
KJC3_007527-T1.exon4KJC3_007527-T1.exon4Aspergillus niger KJC3exon
KJC3_007527-T1.exon3KJC3_007527-T1.exon3Aspergillus niger KJC3exon
KJC3_007527-T1.exon2KJC3_007527-T1.exon2Aspergillus niger KJC3exon
KJC3_007527-T1.exon1KJC3_007527-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007527-T1.utr5p2KJC3_007527-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007527-T1.utr5p1KJC3_007527-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017901
DBxrefInterPro:IPR012945
DBxrefInterPro:IPR016098
DBxrefInterPro:IPR031925
DBxrefInterPro:IPR038397
DBxrefInterPro:IPR006599
DBxrefPFAM:PF16752
DBxrefPFAM:PF07986
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2712538..2714748 -
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