You are here

Home

KJC3_007534-T1, KJC3_007534-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007534-T1
Unique NameKJC3_007534-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2729587..2731167+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007534-T1 ID=KJC3_007534-T1|Name=KJC3_007534-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1581bp|location=Sequence derived from alignment at ch5:2729587..2731167+ (Aspergillus niger KJC3)
TATAAATTGAACAATTATTCGTCAGGTTTACCCTCACCGAGTCCGCTTGC
AATTGCATATTCTAAACCATTATGGATGATTATCTTGATGTCTTCGGCCA
ACAGACCTTCACTATCAATATTCAGTCATGTTTTTGCTTTCCCCTCCCAG
ACAACTCCGCATGCCCGGAAATTGTCGGCACTCTCACCAAAGGTCTCGAA
AGACTCCGTACAAGCTTTCCGTGGTTAGCAGGTCAAGTTGTCAATGAGGG
TTCGAGCGATGGCGACACGGGTTACTTCATGATCAGGCCGCTGGAAAATG
AAGCTCAGCTGGTTGTGCGAGATCTGCAGAATGACCTCTCAGTCGCGACA
ATGAAAGATTTACAGCGTGCTAATTACCCCATAGGCATGCTGGATCAAAA
CATTCTGGCGCCCCGCAAGATTTTCCCGGAGAACCAGGATGACTCGAAGC
CTGTTTTCCTTATCCAAGCGACTTTTATCACGGGAGGCCTCCTTCTCACC
TTCGTCGCTCAACACAATGCTATGGATGCCACCGGCCTAGTTAATATTAT
TCACCTTTTTTCTAAGGCTTGTCGAAACGAAGAATTCACATATGAGGAGC
TCCGGGACGGTAATCTTCCACGCCGAGATATTGTTCCATTGCTCGAAGAC
AGCCATGCGACAGATGCCGAGCTCAATCGTTATATTGTCAAAACCGCTCC
ATATAAGCATTCAACTAACTTGCCAGGGACTCGTATGCCGAAATGCTCAT
GGACGTCTTTCAAAATCTCACCTCGCTCGCTAGAGGAGCTGAAATCTGTT
GCTATGGCATCCCTCCCACCGCCATCCTTCGTCTCTACTGATGATGCACT
CACGGCCTTCATCTGGCAATCTGTTACTCGGGCCCGTCTGCGCCGACTGG
GTCCCTCGACTCACTCAACCATCATGCGCGCCGTGGATGTACGGGGACTT
CTCGATATTTCTCCGCTCTACCCGGGACCTATACAGAGCAATGTCTATAC
CGAATCTTCGATCATGAGACTCATTGAGGAGCCGTTGGGTAACATTGCTT
TGCAACTTCGGCTAGCTCTAAGCGACGAATCGCGCTTAGAACACCACACG
CGTGTTATTGCAACCTTCCTGAGTCGTACGCCGGACAAGAATATTTTCTC
CTTTGGCGCATCAATCGATACAACCACGGATCTCATTTTCAGTTCGTGGG
CAAAACTGGAGAGCTATCGCTTTGACTTCAACCTTGGTTTAGGATTGCCT
GAGGCTGTACGAAAGCCAAGATGCAATGAGGTCGAGGGGTTGACTTTTCT
ATTGCCCAAGACACGTGAAGGCGAGGTCATAGTTGCAATATACCTACGGG
ATGAAGATATAGAAGAGCTCCGGTCTGATGTCGTCTTCATCAAACATGCG
GAGTATGTTGGTTAGAGGCTGGTGCCAGAGTAGGATAATTTTACATTAAG
TGTTGAAGATGATAATATTTTCCGGGCCAAAATTAGTTAGGCTTGACGAG
ATATACGTACTTGATGTTCTAGCAAGGTCGACTGCTTTCCCTTTCCGTTT
CAGTGCCCACTTAGTAGACCTGAGCACGCCC
back to top

Coding sequence (CDS) from alignment at ch5:2729587..2731167+

>KJC3_007534-T1 ID=KJC3_007534-T1|Name=KJC3_007534-T1|organism=Aspergillus niger KJC3|type=CDS|length=1344bp|location=Sequence derived from alignment at ch5:2729587..2731167+ (Aspergillus niger KJC3)
ATGGATGATTATCTTGATGTCTTCGGCCAACAGACCTTCACTATCAATAT
TCAGTCATGTTTTTGCTTTCCCCTCCCAGACAACTCCGCATGCCCGGAAA
TTGTCGGCACTCTCACCAAAGGTCTCGAAAGACTCCGTACAAGCTTTCCG
TGGTTAGCAGGTCAAGTTGTCAATGAGGGTTCGAGCGATGGCGACACGGG
TTACTTCATGATCAGGCCGCTGGAAAATGAAGCTCAGCTGGTTGTGCGAG
ATCTGCAGAATGACCTCTCAGTCGCGACAATGAAAGATTTACAGCGTGCT
AATTACCCCATAGGCATGCTGGATCAAAACATTCTGGCGCCCCGCAAGAT
TTTCCCGGAGAACCAGGATGACTCGAAGCCTGTTTTCCTTATCCAAGCGA
CTTTTATCACGGGAGGCCTCCTTCTCACCTTCGTCGCTCAACACAATGCT
ATGGATGCCACCGGCCTAGTTAATATTATTCACCTTTTTTCTAAGGCTTG
TCGAAACGAAGAATTCACATATGAGGAGCTCCGGGACGGTAATCTTCCAC
GCCGAGATATTGTTCCATTGCTCGAAGACAGCCATGCGACAGATGCCGAG
CTCAATCGTTATATTGTCAAAACCGCTCCATATAAGCATTCAACTAACTT
GCCAGGGACTCGTATGCCGAAATGCTCATGGACGTCTTTCAAAATCTCAC
CTCGCTCGCTAGAGGAGCTGAAATCTGTTGCTATGGCATCCCTCCCACCG
CCATCCTTCGTCTCTACTGATGATGCACTCACGGCCTTCATCTGGCAATC
TGTTACTCGGGCCCGTCTGCGCCGACTGGGTCCCTCGACTCACTCAACCA
TCATGCGCGCCGTGGATGTACGGGGACTTCTCGATATTTCTCCGCTCTAC
CCGGGACCTATACAGAGCAATGTCTATACCGAATCTTCGATCATGAGACT
CATTGAGGAGCCGTTGGGTAACATTGCTTTGCAACTTCGGCTAGCTCTAA
GCGACGAATCGCGCTTAGAACACCACACGCGTGTTATTGCAACCTTCCTG
AGTCGTACGCCGGACAAGAATATTTTCTCCTTTGGCGCATCAATCGATAC
AACCACGGATCTCATTTTCAGTTCGTGGGCAAAACTGGAGAGCTATCGCT
TTGACTTCAACCTTGGTTTAGGATTGCCTGAGGCTGTACGAAAGCCAAGA
TGCAATGAGGTCGAGGGGTTGACTTTTCTATTGCCCAAGACACGTGAAGG
CGAGGTCATAGTTGCAATATACCTACGGGATGAAGATATAGAAGAGCTCC
GGTCTGATGTCGTCTTCATCAAACATGCGGAGTATGTTGGTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007534KJC3_007534Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007534-T1.utr5p1KJC3_007534-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007534-T1.exon1KJC3_007534-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007534-T1.cdsKJC3_007534-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007534-T1.utr3p1KJC3_007534-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007534-T1KJC3_007534-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023213
DBxrefInterPro:IPR003480
DBxrefPFAM:PF02458
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2729587..2731167 +
Powered by Drupal