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KJC3_007555-T1, KJC3_007555-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007555-T1
Unique NameKJC3_007555-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2776196..2778991-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007555-T1 ID=KJC3_007555-T1|Name=KJC3_007555-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2796bp|location=Sequence derived from alignment at ch5:2776196..2778991- (Aspergillus niger KJC3)
CCAGAACTATCTACATCGGCAGAACCAACAACACCTCACAATCATGCACC
TACACTCACTTTCCACCTCCCAGAACACGATCTAACAATTAATACAATGA
CAACAAATCCTCACGACCATATAGCCACCCACCTCCTGACCACAAAATCC
CTCCCCGTCTCCCCCACCTGGCTCACCACCTTCCTCTCCTCAACATCAAC
CTCACGCACCATCCCCCTCAGCGCCCTTACCCAAACCGCCCTCTTCCGCA
TCCTCACCTCCGACATCCGCGACTCCCTCAGCACCAGCAGCCCCTCAACC
CTCCTCCCAACCGACATCTTCAACCCCACCATCCAAGAACGCCGTCTCAA
TGGCCCCATCCCACTCCAAGTCCTCGACATCGAAGACATCGGCACAAGCC
TCTGGAGCCAAGTGGAGGCTATTGAGCGCGTGGAAAGGGGGGAGGCGATC
CGGGGGAGGGAAATCGTGAGGACGGTTAATGTGGGGGAGGATAGTGAGGC
TGCGGACAACAATAATGCAGCTGGTGGGGGTGAGAGTAATGGTCCGCATC
GGTTGATTCTGCAGGATGCGGCGGGGACGAGGGCCGTTGGGTTGGAGTTT
GCGAGGGTCAGTGGGATTGGGTTGGGGAAGTTGGCTATTGGGGCGAAGGT
CGTCGTAAAGGATGTTACGGTTGCGAGAGGGATGGTGATGCTTACGCCGG
AGTCGTGTGTGGTCTTGGGAGGGAAGATTGAGGGGTTGGATATACAGTGG
AGGGAGGGGAGGAAGAAGAGGTTGTTGGAGAGGATTAATGGGGAGAATGA
GGGGTCTTAGGTTTGTTAAGATGGTAGGTAGGTTATTTCTTGCGGTTATC
GTGGACGATGGATTGTCTAATGCATGCATGCATCTATACTAATGTGTGCG
CGTGACAGTTAACTACAACACGTCTAGCTGGTCGTTGAGACCGCGTGGTT
CAACTCCTCCCATCCAGTCTGCTTCCATGGCGCAACCATGATCGCCCGCA
GCGCGTCGCTTGCCTTTCCGGTCTGTGCGTATGCTGCGGACAAATCGATG
GCTTCCAGGTTGCTCCGGGGAGGAACGCTCCTCGATGCCCGTTTGGTCGC
CATCTCCGCAGGGTACAGTTCCTGGGTGGCAGACGCCAATTCTACCCAGC
CTTGAGGTTCGTACGGCGATCTCATCACTGCTGCTGTGGCCTCGCCGACG
CGTCGGACATCCTCGGGTACGCCAGAGTTGTCGGTGAATCCAAGGGTTGA
GATGGCGGTCAAGAGCTTGATCAGCTTGCCGCGTTCGTGGATCTCAATGT
CATCTCGAGTGATCATATTCTGCAGATCGGATTCAACCGCTTCAATGGCA
TCCGCATCGGCGTCAAGGAGCGCAATGGCTCCTAGGAGGGTTACAGCCCC
AATGTGCTCTGGGTTCTCCTCAACACAGTCGAATAGTTGCTGGCGTGCCA
CAGCGCGCTCCTCCTCTCCGCCCTTGGCCCACAGAACCTGTGCTAGGAGG
CACACCACTTCCGGAGCGTTGTCCGCTTCTTGAAGGGCGTCACGGAACAT
GTCGATGGCGTTATCCATGGACTTCATGTAGTAGTGTGCTAGACCCGCTG
TCAAATGGGCGGACAGGCGCAACTTGCGGTTCGTCTCTGGGTCGAACTTC
TCTGCATCTTCCTCGCCCGACAGCATAAGAGCTGTCTCCGCCTTCTCGGC
AGCTTCTTCGAAGTCATGGCGCGCAAGCAGAACACGAGCAATGTCTGCAT
TGGCCTGTGCATACCGGGAAAGGGACGATGCCGATTCCGTGACTTCGTAT
TCACTTTCCATGCCTGCGCAAACTAACCGCAGACTAGCCTCGGCGTCTGT
GTGCTCGCCGATTCTTTCCGCCAGGAGAGCAGAAAGATGCACGAACGGAA
GATCGGACGGGTCCTGGCTGGATAGTTGGTGCAGAGCAAAGAAGGGCTGG
ATGAGTTGTGATATTTCATTCGACAGGGACGAATCCGACAGGAGGTGGTC
GAACAAGCTCATCGTATACTGCTTCTTCGACAAGCGGGTCGACGAGGTGG
AAATATCAAAAGCATGTTCAAACAGACCTCTAGCTTCCTGAGGGTCTCCG
AATAAAAGAGCCAAGAATCCTTGGCCAACCCAAGCCGGGGAGTAGTCGGG
GTCAGTGGACTGTGCCCGGGTAAAAGCTTCGTTGGCGAGCTGGATATCAT
TGTGGATGAGATAAAGCGTTCCCAGGTTCGTCCAGACTTGGGCGCTCCTG
TCGTTGAGGTGAAGACTGCGGACGAATGCATGCTGCGCGACTTTGGGACT
CATGCTCGTGGTGACTACTCCAAGGGCGTTCCAGAACTCCGAGTTTCCCG
CTTCGAGCTCAATGGCTCTCTTAAAGCAACGCATGGCTGCCTTCAGGAGC
TTACGTGACTGCTTCTTGTTCTCGGTGTTTACGATAGTCTGCAAACACCG
GTAGGCTCGGTATTCTGCCCAGCCCAGGTTGTACCAAGCGACTGCTTGGG
CATGGCTGTCCCGCAGGGAGACCTGAATGGCACGCTTGTAAGCCAGGATG
GCGGCGTAGAGACATTGACTCGTCCGATTGGCGGTCTCATCATCGGCTGT
TAACGAAGATAGATAATCGTGACCAACATTATCAACTTCCGTCAGGATAT
CTAGGGCTGTAGGTTCCAGCTGAGTCTCGAGTAGGTCTCGTAGCTCATCA
ATCGGCAACCTACCCGCTTTCGATTGGACGTAGGAGAAGAGCGTACAGGC
GTCTCCGATCCCTTTCCAAAGGTTGAAAACGTCAACCCTCTCCAGA
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Coding sequence (CDS) from alignment at ch5:2776196..2778991-

>KJC3_007555-T1 ID=KJC3_007555-T1|Name=KJC3_007555-T1|organism=Aspergillus niger KJC3|type=CDS|length=714bp|location=Sequence derived from alignment at ch5:2776196..2778991- (Aspergillus niger KJC3)
ATGACAACAAATCCTCACGACCATATAGCCACCCACCTCCTGACCACAAA
ATCCCTCCCCGTCTCCCCCACCTGGCTCACCACCTTCCTCTCCTCAACAT
CAACCTCACGCACCATCCCCCTCAGCGCCCTTACCCAAACCGCCCTCTTC
CGCATCCTCACCTCCGACATCCGCGACTCCCTCAGCACCAGCAGCCCCTC
AACCCTCCTCCCAACCGACATCTTCAACCCCACCATCCAAGAACGCCGTC
TCAATGGCCCCATCCCACTCCAAGTCCTCGACATCGAAGACATCGGCACA
AGCCTCTGGAGCCAAGTGGAGGCTATTGAGCGCGTGGAAAGGGGGGAGGC
GATCCGGGGGAGGGAAATCGTGAGGACGGTTAATGTGGGGGAGGATAGTG
AGGCTGCGGACAACAATAATGCAGCTGGTGGGGGTGAGAGTAATGGTCCG
CATCGGTTGATTCTGCAGGATGCGGCGGGGACGAGGGCCGTTGGGTTGGA
GTTTGCGAGGGTCAGTGGGATTGGGTTGGGGAAGTTGGCTATTGGGGCGA
AGGTCGTCGTAAAGGATGTTACGGTTGCGAGAGGGATGGTGATGCTTACG
CCGGAGTCGTGTGTGGTCTTGGGAGGGAAGATTGAGGGGTTGGATATACA
GTGGAGGGAGGGGAGGAAGAAGAGGTTGTTGGAGAGGATTAATGGGGAGA
ATGAGGGGTCTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007555KJC3_007555Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007555-T1KJC3_007555-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007555-T1.cdsKJC3_007555-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007555-T1.utr3p2KJC3_007555-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_007555-T1.utr3p1KJC3_007555-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007555-T1.exon2KJC3_007555-T1.exon2Aspergillus niger KJC3exon
KJC3_007555-T1.exon1KJC3_007555-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007555-T1.utr5p1KJC3_007555-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013894
DBxrefInterPro:IPR042470
DBxrefInterPro:IPR033472
DBxrefPFAM:PF08585
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2776196..2778991 -
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