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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2809537..2810743+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007566-T1 ID=KJC3_007566-T1|Name=KJC3_007566-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1207bp|location=Sequence derived from alignment at ch5:2809537..2810743+ (Aspergillus niger KJC3)
CAAATAACCAACACTGAGAATATCCATGCTCGCCAGACAAATAACTACTA
ACACAGCCATAGAGAGACAAACTAACGATGTCACAATCCCTACAAGATGA
ATCACAAACCAACCCAACAACACCCCTTCACCTCCACGCCGAACTCCTCC
CCAACATCCGCCAACTAACCCTCTACATCTCAGTCCCCCCAAAGACCCCC
CGGTCTAACCTCCAAATCACCCTCTCAGACTCGCGGCGCGCAGTTACTGT
AACATCATCCCTACCCAACACCAACCAAGATGACCCCACCTCAACCTCAG
AAACCATCAAACTCCCCGCGCGCGTCAGCGAATCATCCCGTCGCATCCTC
CAACAACGACCACCCTCCACACAAGGCGAAAGCGAATACTCCTTCCGCAT
GCAAGTAGACGATAATGACACGTCCCTGCACAAGGACGAAACCACCCTAA
ATGACGGGTTTATTCCCTGGACAGCGACAGACATGTCCGCGCATACACGC
CTGCGGTGCGTCAAGTGCCATAACCCCATAATGGAGGGTGGTAAAGTGTG
GAAAGACCTTCCTAGTGGGAACTGGGCTGAGATGATGGATTTCTGGCATT
GTCATAAGCCGGATCCACCGGAGGAGGAGCGGAATAAAGAGGGGGAGGAT
CCCAATGCGGTGGTGAAGGGGTATGGGGCGGGCAATCAGCTTGTTGCGGT
GGAGGGGACGGTGTTGGTGGATGTGACGAGTTTTTTGGTGAAGGGGGTGG
ATTGTTTGGGTGTCGATCAGGTAAGGAATATCTATATTGATGTGTTTTTC
TGGGTTGCATTGCTTGTGGAGTGTTGGGTTTGTAATAGAGGGGTGGGGTG
GGGTGTATGGGCAACAAGAAGGAGACCTTTTCAGTCAATGATGAGGCCTT
CGATACAATTGCCCTATAACTATAGAGTCTTGATCGGTCTGTATGGCCCG
GCATGAACGAGTGCAGTGGCTTGTGTTTGGGTAGCTGTGGGATAAGATAT
CCTCTCTCGCAGATGGATTTCATCCGATAGTCGTCTCAGCCATGAGTCAG
TGTAGCTTGGATGCTCTGGTGCTGTGATTGAGACTGCGCCTCGCTATTTC
TCCGTTGTCTTGGTCCAGAGTGATGGAGTCGACGCGATTATGCAGAGGTA
CATCTATCCGTCTAGTAGATCGTAGCATTCAAGATAATTAATGTAGATAG
AATCAAG back to topCoding sequence (CDS) from alignment at ch5:2809537..2810743+ >KJC3_007566-T1 ID=KJC3_007566-T1|Name=KJC3_007566-T1|organism=Aspergillus niger KJC3|type=CDS|length=879bp|location=Sequence derived from alignment at ch5:2809537..2810743+ (Aspergillus niger KJC3)
ATGTCACAATCCCTACAAGATGAATCACAAACCAACCCAACAACACCCCT
TCACCTCCACGCCGAACTCCTCCCCAACATCCGCCAACTAACCCTCTACA
TCTCAGTCCCCCCAAAGACCCCCCGGTCTAACCTCCAAATCACCCTCTCA
GACTCGCGGCGCGCAGTTACTGTAACATCATCCCTACCCAACACCAACCA
AGATGACCCCACCTCAACCTCAGAAACCATCAAACTCCCCGCGCGCGTCA
GCGAATCATCCCGTCGCATCCTCCAACAACGACCACCCTCCACACAAGGC
GAAAGCGAATACTCCTTCCGCATGCAAGTAGACGATAATGACACGTCCCT
GCACAAGGACGAAACCACCCTAAATGACGGGTTTATTCCCTGGACAGCGA
CAGACATGTCCGCGCATACACGCCTGCGGTGCGTCAAGTGCCATAACCCC
ATAATGGAGGGTGGTAAAGTGTGGAAAGACCTTCCTAGTGGGAACTGGGC
TGAGATGATGGATTTCTGGCATTGTCATAAGCCGGATCCACCGGAGGAGG
AGCGGAATAAAGAGGGGGAGGATCCCAATGCGGTGGTGAAGGGGTATGGG
GCGGGCAATCAGCTTGTTGCGGTGGAGGGGACGGTGTTGGTGGATGTGAC
GAGTTTTTTGGTGAAGGGGGTGGATTGTTTGGGTGTCGATCAGGTAAGGA
ATATCTATATTGATGTGTTTTTCTGGGTTGCATTGCTTGTGGAGTGTTGG
GTTTGTAATAGAGGGGTGGGGTGGGGTGTATGGGCAACAAGAAGGAGACC
TTTTCAGTCAATGATGAGGCCTTCGATACAATTGCCCTATAACTATAGAG
TCTTGATCGGTCTGTATGGCCCGGCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007566-T1.utr5p1 | KJC3_007566-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007566-T1.utr3p1 | KJC3_007566-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019193 |
| DBxref | PFAM:PF09814 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2809537..2810743 + |
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