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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2811930..2814482- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007568-T1 ID=KJC3_007568-T1|Name=KJC3_007568-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2553bp|location=Sequence derived from alignment at ch5:2811930..2814482- (Aspergillus niger KJC3)
AAATGCAGCAACGACCTCGACGCGAAGAGTGCCAGAGCCCATGTTGGACT
TAAGTGGAATTTAATGATTTATATCCGCAGATTATCCAAAAATAGTCAAG
GGCATCTTTCCAGCCATTCACAAACTGTGCTGGGCTGCAGCCATGGCTCG
GTTCGAAGTGAAACGATAATTGATAACCATAGCACTGACGTCTTAACTTT
CTTGTATTATCATTGCACCATTGACATATCGGATCGGCGAGTCATGCTGG
CTTACACTACTTTCCTGTGGCTCGCGTAACTACTTGTCCGAGTTCCAAGC
ATATCCGACTGCGGGCACCTCCTTGATACCTGACACCCGGAAAATGGCGT
CAATCCATACCCCGCAGGAATTGCGTGACAAAAGACGGATATTCGGCATG
GTGAGCAGAGTATATATGGGTGCAGGGTTCTGTGCAGGATGCATTCTGGA
AATCACCACAAGAACAGCACAGCTGTCATAGTTGCACCTGCAGACATCTA
ACAATATGGCCCCATCTCTGGTTGAGGACACTCCTCTGTCGCTCCGGGCG
GCACCTAAGTCCACGCTTAAGACCGATGCTGGTTTTAACAAGGAGAACGT
GATTGGCTATGGGGAGGCCTACAAGCATGAGAACGAGCTCAAGGGCACTG
AGAAGCAGCCGCCAGCTTCGTTTCCCAACTATCTTCCTGTCTGGGACAAT
GAAACAGAAAGGTAGCTTACACTACTCATATATTTATCTGGCTTCACTAC
TGACAGCTTAGATACCCTCCCCTCCAGCCCTTCGAACACTATGACCACGG
AAAGGATGCCGATCCGACCTTCCCTGACCTCCTACCCAAGGACAAAGTCG
AAGTAGATGACATTACACCTACCATTGGCACCGAGGTCCGCGGTGTCCAG
CTGAGCCAGCTGAGCAAGGAAGGAAAAGACCAGCTGGCTTTGTACGTAGC
TCAGCGGAAGGTTGTCGGTACGATCCCCCATCTGTAAGACGAGATGACCT
TTCCATTAACAAACCCTACCAGCATTCCGCGACCAAGACTTCGCACATCT
GCCTATCGAGAAAGCCCTAGAATTCGGCGGCTACTTCGGCAGACACCACA
TCCACCAGACCTCTGGAGCACCCAAGGGCTTCCCGGAGATCCACCTCGTG
CACCGAGGTGCCGATGACAGGAGTGGAGCTGAATTCCTGTCCCAACGCAC
CAACACCATCACCTGGCACTCGGACGTGACCTTCGAAAAGCAGCCCCCTG
GCACGACCTTCCTGTACATTCTGGACGGACCATCAAGCGGTGGTGACACT
CTCTTCGCCGACATGGCACAGGCATACAGACGTCTATCGCCTGAGTTCCG
TAAGAGACTGCACGGGCTGAAGGCAGTTCACTCTGGCATTGAGCAGGTCA
ACAACAGTCTGAACAAGGGGGGTATTGCTCGACGGGATCCAATTACTTCT
GAGCATCCGATTGTCAGGACTCACCCAGTAAGTACCATACACTATACATC
CTTCTTAGCTCGAAGCTAATTACATTATCTAGGTAACCGGAGAGAAAGCC
CTCTTCGTGAACCCCCAATGTATGTACCACCATCACATCACCCTTATACT
CTACATGAACACTAACAGAAACAGTCACTCGATACATCGTCGGCTACAAG
AAAGAAGAGTCTGACTACCTTCTCAAGTTCCTCTACGACCACATTGCTCT
CTCCCAGGATCTCCAAACTCGGGTCAGATGGCGTCCTGGAACTGTTGTCG
TTTGGGACGTAAGTCTAGTCTCCCTACATACTCGACCAAGGATAGAAACC
TAACGAATGCAGAACCGCGTTGTTACCCATTCTGCCCTCTTCGACTGGGA
AGATGGTCAGAGACGCCACCATGCGAGAATCACCCCGCAGGCGGAAGCGC
CGTATGAGACGCCGTACGAGGGTTAGCTGCATACGCTGACAATCTACGCT
AATGAAGTGCACGATGGCAGCGGGACTGGCCTAGATATGATTTAAACTAC
AGAGCATGAATATACTAGGAGATCATTCTCAACTGGTGTGCAGTTGTTGT
CCAGGACATTCCCCAATAGTAATAATCTCCTCGATTAAGCACATAGCAAC
ACCACACTCATCGCCCCTCCCCTTTCAGTGATCTCACCACCCAGCATAAC
AATCTTATCGCGAAGCGACTCATAATAACCGCCTACTACCCAGAGAAAGC
AGCAGATTTGGTAGACGCAGATACAGCATCCCCAGGCGGATGAATCCTAA
TAGCCGGTGCCATACAAGTCCCCGTCCCCGTCCCCGTTCCCTCACCCGCA
CCCATCACATCGTCCATATGAAACGCCTCTGACTCGGGATGCGTTTCAGG
ATCGAGAATCCTTTCGGGATGATTGTCTGCAGTAGACAGGTTATTTTTGT
TGTGAGTAGTAGCGGGAGTAGTAGTTGTAGGATTAGTTGAATGAGATGGA
GGAGGGACATGTTCGAGGTGTTCCCATGTAACGGTGTTGTTTTCGTCGGA
GCTGGTGGAGAATGAGCGGGGAGGGTGGTGTGATTGGGATTGGGATGTTG
TTG back to topCoding sequence (CDS) from alignment at ch5:2811930..2814482- >KJC3_007568-T1 ID=KJC3_007568-T1|Name=KJC3_007568-T1|organism=Aspergillus niger KJC3|type=CDS|length=6912bp|location=Sequence derived from alignment at ch5:2811930..2814482- (Aspergillus niger KJC3)
AACCGCGTTGTTACCCATTCTGCCCTCTTCGACTGGGAAGATGGTCAGAG
ACGCCACCATGCGAGAATCACCCCGCAGGCGGAAGCGCCGTATGAGACGC
CGTACGAGGGTTAGTCACTCGATACATCGTCGGCTACAAGAAAGAAGAGT
CTGACTACCTTCTCAAGTTCCTCTACGACCACATTGCTCTCTCCCAGGAT
CTCCAAACTCGGGTCAGATGGCGTCCTGGAACTGTTGTCGTTTGGGACGT
AACCGGAGAGAAAGCCCTCTTCGTGAACCCCCAATCATTCCGCGACCAAG
ACTTCGCACATCTGCCTATCGAGAAAGCCCTAGAATTCGGCGGCTACTTC
GGCAGACACCACATCCACCAGACCTCTGGAGCACCCAAGGGCTTCCCGGA
GATCCACCTCGTGCACCGAGGTGCCGATGACAGGAGTGGAGCTGAATTCC
TGTCCCAACGCACCAACACCATCACCTGGCACTCGGACGTGACCTTCGAA
AAGCAGCCCCCTGGCACGACCTTCCTGTACATTCTGGACGGACCATCAAG
CGGTGGTGACACTCTCTTCGCCGACATGGCACAGGCATACAGACGTCTAT
CGCCTGAGTTCCGTAAGAGACTGCACGGGCTGAAGGCAGTTCACTCTGGC
ATTGAGCAGGTCAACAACAGTCTGAACAAGGGGGGTATTGCTCGACGGGA
TCCAATTACTTCTGAGCATCCGATTGTCAGGACTCACCCAATACCCTCCC
CTCCAGCCCTTCGAACACTATGACCACGGAAAGGATGCCGATCCGACCTT
CCCTGACCTCCTACCCAAGGACAAAGTCGAAGTAGATGACATTACACCTA
CCATTGGCACCGAGGTCCGCGGTGTCCAGCTGAGCCAGCTGAGCAAGGAA
GGAAAAGACCAGCTGGCTTTGTACGTAGCTCAGCGGAAGGTTGTCGATGG
CCCCATCTCTGGTTGAGGACACTCCTCTGTCGCTCCGGGCGGCACCTAAG
TCCACGCTTAAGACCGATGCTGGTTTTAACAAGGAGAACGTGATTGGCTA
TGGGGAGGCCTACAAGCATGAGAACGAGCTCAAGGGCACTGAGAAGCAGC
CGCCAGCTTCGTTTCCCAACTATCTTCCTGTCTGGGACAATGAAACAGAA
AGAACCGCGTTGTTACCCATTCTGCCCTCTTCGACTGGGAAGATGGTCAG
AGACGCCACCATGCGAGAATCACCCCGCAGGCGGAAGCGCCGTATGAGAC
GCCGTACGAGGGTTAGTCACTCGATACATCGTCGGCTACAAGAAAGAAGA
GTCTGACTACCTTCTCAAGTTCCTCTACGACCACATTGCTCTCTCCCAGG
ATCTCCAAACTCGGGTCAGATGGCGTCCTGGAACTGTTGTCGTTTGGGAC
GTAACCGGAGAGAAAGCCCTCTTCGTGAACCCCCAATCATTCCGCGACCA
AGACTTCGCACATCTGCCTATCGAGAAAGCCCTAGAATTCGGCGGCTACT
TCGGCAGACACCACATCCACCAGACCTCTGGAGCACCCAAGGGCTTCCCG
GAGATCCACCTCGTGCACCGAGGTGCCGATGACAGGAGTGGAGCTGAATT
CCTGTCCCAACGCACCAACACCATCACCTGGCACTCGGACGTGACCTTCG
AAAAGCAGCCCCCTGGCACGACCTTCCTGTACATTCTGGACGGACCATCA
AGCGGTGGTGACACTCTCTTCGCCGACATGGCACAGGCATACAGACGTCT
ATCGCCTGAGTTCCGTAAGAGACTGCACGGGCTGAAGGCAGTTCACTCTG
GCATTGAGCAGGTCAACAACAGTCTGAACAAGGGGGGTATTGCTCGACGG
GATCCAATTACTTCTGAGCATCCGATTGTCAGGACTCACCCAATACCCTC
CCCTCCAGCCCTTCGAACACTATGACCACGGAAAGGATGCCGATCCGACC
TTCCCTGACCTCCTACCCAAGGACAAAGTCGAAGTAGATGACATTACACC
TACCATTGGCACCGAGGTCCGCGGTGTCCAGCTGAGCCAGCTGAGCAAGG
AAGGAAAAGACCAGCTGGCTTTGTACGTAGCTCAGCGGAAGGTTGTCGAT
GGCCCCATCTCTGGTTGAGGACACTCCTCTGTCGCTCCGGGCGGCACCTA
AGTCCACGCTTAAGACCGATGCTGGTTTTAACAAGGAGAACGTGATTGGC
TATGGGGAGGCCTACAAGCATGAGAACGAGCTCAAGGGCACTGAGAAGCA
GCCGCCAGCTTCGTTTCCCAACTATCTTCCTGTCTGGGACAATGAAACAG
AAAGAACCGCGTTGTTACCCATTCTGCCCTCTTCGACTGGGAAGATGGTC
AGAGACGCCACCATGCGAGAATCACCCCGCAGGCGGAAGCGCCGTATGAG
ACGCCGTACGAGGGTTAGTCACTCGATACATCGTCGGCTACAAGAAAGAA
GAGTCTGACTACCTTCTCAAGTTCCTCTACGACCACATTGCTCTCTCCCA
GGATCTCCAAACTCGGGTCAGATGGCGTCCTGGAACTGTTGTCGTTTGGG
ACGTAACCGGAGAGAAAGCCCTCTTCGTGAACCCCCAATCATTCCGCGAC
CAAGACTTCGCACATCTGCCTATCGAGAAAGCCCTAGAATTCGGCGGCTA
CTTCGGCAGACACCACATCCACCAGACCTCTGGAGCACCCAAGGGCTTCC
CGGAGATCCACCTCGTGCACCGAGGTGCCGATGACAGGAGTGGAGCTGAA
TTCCTGTCCCAACGCACCAACACCATCACCTGGCACTCGGACGTGACCTT
CGAAAAGCAGCCCCCTGGCACGACCTTCCTGTACATTCTGGACGGACCAT
CAAGCGGTGGTGACACTCTCTTCGCCGACATGGCACAGGCATACAGACGT
CTATCGCCTGAGTTCCGTAAGAGACTGCACGGGCTGAAGGCAGTTCACTC
TGGCATTGAGCAGGTCAACAACAGTCTGAACAAGGGGGGTATTGCTCGAC
GGGATCCAATTACTTCTGAGCATCCGATTGTCAGGACTCACCCAATACCC
TCCCCTCCAGCCCTTCGAACACTATGACCACGGAAAGGATGCCGATCCGA
CCTTCCCTGACCTCCTACCCAAGGACAAAGTCGAAGTAGATGACATTACA
CCTACCATTGGCACCGAGGTCCGCGGTGTCCAGCTGAGCCAGCTGAGCAA
GGAAGGAAAAGACCAGCTGGCTTTGTACGTAGCTCAGCGGAAGGTTGTCG
ATGGCCCCATCTCTGGTTGAGGACACTCCTCTGTCGCTCCGGGCGGCACC
TAAGTCCACGCTTAAGACCGATGCTGGTTTTAACAAGGAGAACGTGATTG
GCTATGGGGAGGCCTACAAGCATGAGAACGAGCTCAAGGGCACTGAGAAG
CAGCCGCCAGCTTCGTTTCCCAACTATCTTCCTGTCTGGGACAATGAAAC
AGAAAGAACCGCGTTGTTACCCATTCTGCCCTCTTCGACTGGGAAGATGG
TCAGAGACGCCACCATGCGAGAATCACCCCGCAGGCGGAAGCGCCGTATG
AGACGCCGTACGAGGGTTAGTCACTCGATACATCGTCGGCTACAAGAAAG
AAGAGTCTGACTACCTTCTCAAGTTCCTCTACGACCACATTGCTCTCTCC
CAGGATCTCCAAACTCGGGTCAGATGGCGTCCTGGAACTGTTGTCGTTTG
GGACGTAACCGGAGAGAAAGCCCTCTTCGTGAACCCCCAATCATTCCGCG
ACCAAGACTTCGCACATCTGCCTATCGAGAAAGCCCTAGAATTCGGCGGC
TACTTCGGCAGACACCACATCCACCAGACCTCTGGAGCACCCAAGGGCTT
CCCGGAGATCCACCTCGTGCACCGAGGTGCCGATGACAGGAGTGGAGCTG
AATTCCTGTCCCAACGCACCAACACCATCACCTGGCACTCGGACGTGACC
TTCGAAAAGCAGCCCCCTGGCACGACCTTCCTGTACATTCTGGACGGACC
ATCAAGCGGTGGTGACACTCTCTTCGCCGACATGGCACAGGCATACAGAC
GTCTATCGCCTGAGTTCCGTAAGAGACTGCACGGGCTGAAGGCAGTTCAC
TCTGGCATTGAGCAGGTCAACAACAGTCTGAACAAGGGGGGTATTGCTCG
ACGGGATCCAATTACTTCTGAGCATCCGATTGTCAGGACTCACCCAATAC
CCTCCCCTCCAGCCCTTCGAACACTATGACCACGGAAAGGATGCCGATCC
GACCTTCCCTGACCTCCTACCCAAGGACAAAGTCGAAGTAGATGACATTA
CACCTACCATTGGCACCGAGGTCCGCGGTGTCCAGCTGAGCCAGCTGAGC
AAGGAAGGAAAAGACCAGCTGGCTTTGTACGTAGCTCAGCGGAAGGTTGT
CGATGGCCCCATCTCTGGTTGAGGACACTCCTCTGTCGCTCCGGGCGGCA
CCTAAGTCCACGCTTAAGACCGATGCTGGTTTTAACAAGGAGAACGTGAT
TGGCTATGGGGAGGCCTACAAGCATGAGAACGAGCTCAAGGGCACTGAGA
AGCAGCCGCCAGCTTCGTTTCCCAACTATCTTCCTGTCTGGGACAATGAA
ACAGAAAGAACCGCGTTGTTACCCATTCTGCCCTCTTCGACTGGGAAGAT
GGTCAGAGACGCCACCATGCGAGAATCACCCCGCAGGCGGAAGCGCCGTA
TGAGACGCCGTACGAGGGTTAGTCACTCGATACATCGTCGGCTACAAGAA
AGAAGAGTCTGACTACCTTCTCAAGTTCCTCTACGACCACATTGCTCTCT
CCCAGGATCTCCAAACTCGGGTCAGATGGCGTCCTGGAACTGTTGTCGTT
TGGGACGTAACCGGAGAGAAAGCCCTCTTCGTGAACCCCCAATCATTCCG
CGACCAAGACTTCGCACATCTGCCTATCGAGAAAGCCCTAGAATTCGGCG
GCTACTTCGGCAGACACCACATCCACCAGACCTCTGGAGCACCCAAGGGC
TTCCCGGAGATCCACCTCGTGCACCGAGGTGCCGATGACAGGAGTGGAGC
TGAATTCCTGTCCCAACGCACCAACACCATCACCTGGCACTCGGACGTGA
CCTTCGAAAAGCAGCCCCCTGGCACGACCTTCCTGTACATTCTGGACGGA
CCATCAAGCGGTGGTGACACTCTCTTCGCCGACATGGCACAGGCATACAG
ACGTCTATCGCCTGAGTTCCGTAAGAGACTGCACGGGCTGAAGGCAGTTC
ACTCTGGCATTGAGCAGGTCAACAACAGTCTGAACAAGGGGGGTATTGCT
CGACGGGATCCAATTACTTCTGAGCATCCGATTGTCAGGACTCACCCAAT
ACCCTCCCCTCCAGCCCTTCGAACACTATGACCACGGAAAGGATGCCGAT
CCGACCTTCCCTGACCTCCTACCCAAGGACAAAGTCGAAGTAGATGACAT
TACACCTACCATTGGCACCGAGGTCCGCGGTGTCCAGCTGAGCCAGCTGA
GCAAGGAAGGAAAAGACCAGCTGGCTTTGTACGTAGCTCAGCGGAAGGTT
GTCGATGGCCCCATCTCTGGTTGAGGACACTCCTCTGTCGCTCCGGGCGG
CACCTAAGTCCACGCTTAAGACCGATGCTGGTTTTAACAAGGAGAACGTG
ATTGGCTATGGGGAGGCCTACAAGCATGAGAACGAGCTCAAGGGCACTGA
GAAGCAGCCGCCAGCTTCGTTTCCCAACTATCTTCCTGTCTGGGACAATG
AAACAGAAAGAACCGCGTTGTTACCCATTCTGCCCTCTTCGACTGGGAAG
ATGGTCAGAGACGCCACCATGCGAGAATCACCCCGCAGGCGGAAGCGCCG
TATGAGACGCCGTACGAGGGTTAGTCACTCGATACATCGTCGGCTACAAG
AAAGAAGAGTCTGACTACCTTCTCAAGTTCCTCTACGACCACATTGCTCT
CTCCCAGGATCTCCAAACTCGGGTCAGATGGCGTCCTGGAACTGTTGTCG
TTTGGGACGTAACCGGAGAGAAAGCCCTCTTCGTGAACCCCCAATCATTC
CGCGACCAAGACTTCGCACATCTGCCTATCGAGAAAGCCCTAGAATTCGG
CGGCTACTTCGGCAGACACCACATCCACCAGACCTCTGGAGCACCCAAGG
GCTTCCCGGAGATCCACCTCGTGCACCGAGGTGCCGATGACAGGAGTGGA
GCTGAATTCCTGTCCCAACGCACCAACACCATCACCTGGCACTCGGACGT
GACCTTCGAAAAGCAGCCCCCTGGCACGACCTTCCTGTACATTCTGGACG
GACCATCAAGCGGTGGTGACACTCTCTTCGCCGACATGGCACAGGCATAC
AGACGTCTATCGCCTGAGTTCCGTAAGAGACTGCACGGGCTGAAGGCAGT
TCACTCTGGCATTGAGCAGGTCAACAACAGTCTGAACAAGGGGGGTATTG
CTCGACGGGATCCAATTACTTCTGAGCATCCGATTGTCAGGACTCACCCA
ATACCCTCCCCTCCAGCCCTTCGAACACTATGACCACGGAAAGGATGCCG
ATCCGACCTTCCCTGACCTCCTACCCAAGGACAAAGTCGAAGTAGATGAC
ATTACACCTACCATTGGCACCGAGGTCCGCGGTGTCCAGCTGAGCCAGCT
GAGCAAGGAAGGAAAAGACCAGCTGGCTTTGTACGTAGCTCAGCGGAAGG
TTGTCGATGGCCCCATCTCTGGTTGAGGACACTCCTCTGTCGCTCCGGGC
GGCACCTAAGTCCACGCTTAAGACCGATGCTGGTTTTAACAAGGAGAACG
TGATTGGCTATGGGGAGGCCTACAAGCATGAGAACGAGCTCAAGGGCACT
GAGAAGCAGCCGCCAGCTTCGTTTCCCAACTATCTTCCTGTCTGGGACAA
TGAAACAGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007568-T1.utr3p1 | KJC3_007568-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007568-T1.utr5p1 | KJC3_007568-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042098 |
| DBxref | InterPro:IPR003819 |
| DBxref | PFAM:PF02668 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2811930..2814482 - |
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