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KJC3_007575-T1, KJC3_007575-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007575-T1
Unique NameKJC3_007575-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2829568..2831068-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007575-T1 ID=KJC3_007575-T1|Name=KJC3_007575-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1501bp|location=Sequence derived from alignment at ch5:2829568..2831068- (Aspergillus niger KJC3)
CCCAGCTCCGCCATCATCGCCGATCCACCACCGAGAGCTCCAGCCGCTCT
TGACTTCCCGACTATCCAGCATTCGAGTCCCCCAGCCTGTTTACTCGCTG
CGCATTGGTTACCATCGCGTTCAACATGTCGACCACCACCGCGACGGCGA
TCCAAAGCTCGCGCCCGTACGTCCTGACATCGACCTACCTCACTACCGCT
TCCTTCTCCACGCAATCACCACTGACCATGTCATGAATAATAGCCCCATC
ATCCCCAAAGACTTCTCCGCGCAACAACCCAAAACAATCCGCCTGTACCC
CCTCTCCAACTACACATTCGGCACCAAGGAAACGCAACCGGAGGAGGACC
CGTCCGTTTTGGCGCGTCTAAAACGTCTCGAGGAGCACTACGACCTACAT
GGCATGAGACGCACCTGCGAGGGCGTCCTCGTCTGCCACGAACACAACCA
TCCTCATGTGCTGATGCTGCAGATTGCCAACGCGTTTTTCAAGCTGTACG
TTTGTATACCCTCTGCAATCTGGAGCTTCTACTTACCCTGGTGGATACAG
CCCCGGTGACTACCTCCACTTCGAAGACGACGAAGTCGAAGGCTTCAAGA
AACGCCTCAATGAACGTCTCGCCCCCGTCGGCTCCCAGTTCTCGGGCGAA
GGCGTTAACGAAGACTGGGAGATTGGTGACACGTTGGCGCAATGGTGGAG
GCCGAACTTTGAGACGTTCATGTACCCTTTCCTCCCGGGACATGTGACTC
GGCCGAAGGAGTGCAAGAAGTTGTATTTCATCCAATTGCCGAAGAAGAGT
AAGCCTTCCTTCATATATCATGCACAGTCAGGCCATCAGGGAGGAATGGT
ATGATTAATTTGTGTTGTGCAGAGGTCCTCTCGGTCCCGAAGAACATGAA
ACTCCTCGCCGTCCCACTCTTCGAACTATACGACAACACGGCCCGGTATG
GCCCTCAGCTCTCGGCTATCCCGCACTTGCTGTCGAGATACAATTTTGAG
TTTGTCGATGAGAACGACAACGTGGTTGCCGCGACGCCGGGCACGCCCTT
GCCGGATCATCAGATCCCCCGGACGAAGGTGCTGGCTGGTGATAGCGGTG
ATGGACAGGATGAGGGGATGACGGATTACCCTTCTGGAGAGGGCGAAAAC
GGGGCTAGTGCGTAGTTTGGGGTTGGTCGTGTGCGTCCTGTGCTGTCCTG
TCTTGAACCGAACCAGACTGGCAGGGACTATTATTCCGAGTATTCCCCGG
CGAAGGATGGCAGTGATGAGACATTCGGCTGGATTGGATCGGACCCCTGC
TGATCAGCTCGGGGAATTCTCCTATTCCGTGGGATTGATTCTTTTCTTTT
TCTTTTCTATTCTATGCTATGCAAAAGACGTGATGTGTGTCTGGTTGGCG
TTCCAGGAGCGAAGATTGCTTTTCTTACTATATTATTCCTTCTTCTATGT
TCTTGAATTAGCTATGCAGGTAGCGGTCAATATATCCTTTAAGCAGATAC
C
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Coding sequence (CDS) from alignment at ch5:2829568..2831068-

>KJC3_007575-T1 ID=KJC3_007575-T1|Name=KJC3_007575-T1|organism=Aspergillus niger KJC3|type=CDS|length=3336bp|location=Sequence derived from alignment at ch5:2829568..2831068- (Aspergillus niger KJC3)
AGGTCCTCTCGGTCCCGAAGAACATGAAACTCCTCGCCGTCCCACTCTTC
GAACTATACGACAACACGGCCCGGTATGGCCCTCAGCTCTCGGCTATCCC
GCACTTGCTGTCGAGATACAATTTTGAGTTTGTCGATGAGAACGACAACG
TGGTTGCCGCGACGCCGGGCACGCCCTTGCCGGATCATCAGATCCCCCGG
ACGAAGGTGCTGGCTGGTGATAGCGGTGATGGACAGGATGAGGGGATGAC
GGATTACCCTTCTGGAGAGGGCGAAAACGGGGCTAGTGCGTAGCCCCGGT
GACTACCTCCACTTCGAAGACGACGAAGTCGAAGGCTTCAAGAAACGCCT
CAATGAACGTCTCGCCCCCGTCGGCTCCCAGTTCTCGGGCGAAGGCGTTA
ACGAAGACTGGGAGATTGGTGACACGTTGGCGCAATGGTGGAGGCCGAAC
TTTGAGACGTTCATGTACCCTTTCCTCCCGGGACATGTGACTCGGCCGAA
GGAGTGCAAGAAGTTGTATTTCATCCAATTGCCGAAGAAGACCCCATCAT
CCCCAAAGACTTCTCCGCGCAACAACCCAAAACAATCCGCCTGTACCCCC
TCTCCAACTACACATTCGGCACCAAGGAAACGCAACCGGAGGAGGACCCG
TCCGTTTTGGCGCGTCTAAAACGTCTCGAGGAGCACTACGACCTACATGG
CATGAGACGCACCTGCGAGGGCGTCCTCGTCTGCCACGAACACAACCATC
CTCATGTGCTGATGCTGCAGATTGCCAACGCGTTTTTCAAGCTATGTCGA
CCACCACCGCGACGGCGATCCAAAGCTCGCGCCCAGGTCCTCTCGGTCCC
GAAGAACATGAAACTCCTCGCCGTCCCACTCTTCGAACTATACGACAACA
CGGCCCGGTATGGCCCTCAGCTCTCGGCTATCCCGCACTTGCTGTCGAGA
TACAATTTTGAGTTTGTCGATGAGAACGACAACGTGGTTGCCGCGACGCC
GGGCACGCCCTTGCCGGATCATCAGATCCCCCGGACGAAGGTGCTGGCTG
GTGATAGCGGTGATGGACAGGATGAGGGGATGACGGATTACCCTTCTGGA
GAGGGCGAAAACGGGGCTAGTGCGTAGCCCCGGTGACTACCTCCACTTCG
AAGACGACGAAGTCGAAGGCTTCAAGAAACGCCTCAATGAACGTCTCGCC
CCCGTCGGCTCCCAGTTCTCGGGCGAAGGCGTTAACGAAGACTGGGAGAT
TGGTGACACGTTGGCGCAATGGTGGAGGCCGAACTTTGAGACGTTCATGT
ACCCTTTCCTCCCGGGACATGTGACTCGGCCGAAGGAGTGCAAGAAGTTG
TATTTCATCCAATTGCCGAAGAAGACCCCATCATCCCCAAAGACTTCTCC
GCGCAACAACCCAAAACAATCCGCCTGTACCCCCTCTCCAACTACACATT
CGGCACCAAGGAAACGCAACCGGAGGAGGACCCGTCCGTTTTGGCGCGTC
TAAAACGTCTCGAGGAGCACTACGACCTACATGGCATGAGACGCACCTGC
GAGGGCGTCCTCGTCTGCCACGAACACAACCATCCTCATGTGCTGATGCT
GCAGATTGCCAACGCGTTTTTCAAGCTATGTCGACCACCACCGCGACGGC
GATCCAAAGCTCGCGCCCAGGTCCTCTCGGTCCCGAAGAACATGAAACTC
CTCGCCGTCCCACTCTTCGAACTATACGACAACACGGCCCGGTATGGCCC
TCAGCTCTCGGCTATCCCGCACTTGCTGTCGAGATACAATTTTGAGTTTG
TCGATGAGAACGACAACGTGGTTGCCGCGACGCCGGGCACGCCCTTGCCG
GATCATCAGATCCCCCGGACGAAGGTGCTGGCTGGTGATAGCGGTGATGG
ACAGGATGAGGGGATGACGGATTACCCTTCTGGAGAGGGCGAAAACGGGG
CTAGTGCGTAGCCCCGGTGACTACCTCCACTTCGAAGACGACGAAGTCGA
AGGCTTCAAGAAACGCCTCAATGAACGTCTCGCCCCCGTCGGCTCCCAGT
TCTCGGGCGAAGGCGTTAACGAAGACTGGGAGATTGGTGACACGTTGGCG
CAATGGTGGAGGCCGAACTTTGAGACGTTCATGTACCCTTTCCTCCCGGG
ACATGTGACTCGGCCGAAGGAGTGCAAGAAGTTGTATTTCATCCAATTGC
CGAAGAAGACCCCATCATCCCCAAAGACTTCTCCGCGCAACAACCCAAAA
CAATCCGCCTGTACCCCCTCTCCAACTACACATTCGGCACCAAGGAAACG
CAACCGGAGGAGGACCCGTCCGTTTTGGCGCGTCTAAAACGTCTCGAGGA
GCACTACGACCTACATGGCATGAGACGCACCTGCGAGGGCGTCCTCGTCT
GCCACGAACACAACCATCCTCATGTGCTGATGCTGCAGATTGCCAACGCG
TTTTTCAAGCTATGTCGACCACCACCGCGACGGCGATCCAAAGCTCGCGC
CCAGGTCCTCTCGGTCCCGAAGAACATGAAACTCCTCGCCGTCCCACTCT
TCGAACTATACGACAACACGGCCCGGTATGGCCCTCAGCTCTCGGCTATC
CCGCACTTGCTGTCGAGATACAATTTTGAGTTTGTCGATGAGAACGACAA
CGTGGTTGCCGCGACGCCGGGCACGCCCTTGCCGGATCATCAGATCCCCC
GGACGAAGGTGCTGGCTGGTGATAGCGGTGATGGACAGGATGAGGGGATG
ACGGATTACCCTTCTGGAGAGGGCGAAAACGGGGCTAGTGCGTAGCCCCG
GTGACTACCTCCACTTCGAAGACGACGAAGTCGAAGGCTTCAAGAAACGC
CTCAATGAACGTCTCGCCCCCGTCGGCTCCCAGTTCTCGGGCGAAGGCGT
TAACGAAGACTGGGAGATTGGTGACACGTTGGCGCAATGGTGGAGGCCGA
ACTTTGAGACGTTCATGTACCCTTTCCTCCCGGGACATGTGACTCGGCCG
AAGGAGTGCAAGAAGTTGTATTTCATCCAATTGCCGAAGAAGACCCCATC
ATCCCCAAAGACTTCTCCGCGCAACAACCCAAAACAATCCGCCTGTACCC
CCTCTCCAACTACACATTCGGCACCAAGGAAACGCAACCGGAGGAGGACC
CGTCCGTTTTGGCGCGTCTAAAACGTCTCGAGGAGCACTACGACCTACAT
GGCATGAGACGCACCTGCGAGGGCGTCCTCGTCTGCCACGAACACAACCA
TCCTCATGTGCTGATGCTGCAGATTGCCAACGCGTTTTTCAAGCTATGTC
GACCACCACCGCGACGGCGATCCAAAGCTCGCGCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005849mRNA cleavage factor complex
Vocabulary: Biological Process
TermDefinition
GO:0006378mRNA polyadenylation
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007575KJC3_007575Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007575-T1KJC3_007575-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007575-T1.cdsKJC3_007575-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007575-T1.utr3p1KJC3_007575-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007575-T1.exon4KJC3_007575-T1.exon4Aspergillus niger KJC3exon
KJC3_007575-T1.exon3KJC3_007575-T1.exon3Aspergillus niger KJC3exon
KJC3_007575-T1.exon2KJC3_007575-T1.exon2Aspergillus niger KJC3exon
KJC3_007575-T1.exon1KJC3_007575-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007575-T1.utr5p1KJC3_007575-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016706
DBxrefPFAM:PF13869
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2829568..2831068 -
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