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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2836022..2837202- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007577-T1 ID=KJC3_007577-T1|Name=KJC3_007577-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1181bp|location=Sequence derived from alignment at ch5:2836022..2837202- (Aspergillus niger KJC3)
TGTACGGATCAGACAGAACAGAAAAATACTTACCCAAATACAGCTGGGCA
GATTGCTTGATTGCCGGTTCATCTATTATGGGACGCCTTAGAAGTGGTGA
GATGAGTTCCATTGGTTGGGTTTTAGTCGAGGTCAGTTGATTCATTGAGG
AATGTTTGCTTCGGCTTGATTTGATTCGGTTCGATCGAAATCGAAGGTGG
GTATTATTTTGGGATGGCACTATGCGCTGCTAATGTACTTGGCGATGGAG
ATGAAGAGGAGATGTGAGACATTATGACCTATGCCTATGCCATTGATCGA
AATTGGGTGGGATGATGTAGTTTCTACTATCATTCTCTTTTCTTAAGAAT
ATGTTCAAAGACTAGGATGGATAAATGGGGTATATAAAGCACCCTGACTC
CCTTCCTCCAAGTTCTATCTAACCAGCCATCCTACACTCTACATATCCAC
ACCAATCTACTACAATTAACAACCATAATGCATCTCTCTACCAAGTCCCT
CCTCTCTCTCCTCCCCCTCATTCCCCTAGCATCTGCTGTCGGCTCCGCCA
TCGTGCAAAACAACTGCACCTCCCCCATTTACCTCTGGTCGGTTGGCGGC
TCCGTCAGTAGCATGCAAACCATCGACCCCGGATCCAGCTACAGCGAGAC
CTTCTACTACGATACAACCTCCGGCGGCGTTGCCCTGAAGATCACCACCA
CGGAGAATGGTCTGTACAACGGCTCTCCGCAGACGGATTACGCCTATACG
CTGGACACATCCTCGGGTAATGTCTTCTATGATATTTCGGATGTCTTTGG
GGATCCGTTCTCCGGCAGTGTCGTCAGCCTTGTCTCGAGTGATTCCAGCT
GCGAGAGTATTTGTTGGGCTGGGGGAGTGCCGCCCGCTGGCAGTGTTGTG
AGAAGTTGTCAGGATGAGGCGGATGAGGTGTTGACGGTTTGTGCGGATAG
TTGCTAGGTTATTGGGTCGGGAAGGATTGATTTGTGGGAATTGAAGGGAC
AACTGGGTTGATTGGGGATTTAATGTTGTTGTTATTTTTGGTTTCTCTTA
TGGATTAATTGAGGGATGTCTGGTGAAGTGTGTCTGTGTTTAGATGTTGG
TGACTGGACTGGGAAGATATGTGATGTGTTTATGAGGATATAGGAAGTAT
AAGCCTAATGCTACATTGCTTGTTGTATTGG back to topCoding sequence (CDS) from alignment at ch5:2836022..2837202- >KJC3_007577-T1 ID=KJC3_007577-T1|Name=KJC3_007577-T1|organism=Aspergillus niger KJC3|type=CDS|length=480bp|location=Sequence derived from alignment at ch5:2836022..2837202- (Aspergillus niger KJC3)
ATGCATCTCTCTACCAAGTCCCTCCTCTCTCTCCTCCCCCTCATTCCCCT
AGCATCTGCTGTCGGCTCCGCCATCGTGCAAAACAACTGCACCTCCCCCA
TTTACCTCTGGTCGGTTGGCGGCTCCGTCAGTAGCATGCAAACCATCGAC
CCCGGATCCAGCTACAGCGAGACCTTCTACTACGATACAACCTCCGGCGG
CGTTGCCCTGAAGATCACCACCACGGAGAATGGTCTGTACAACGGCTCTC
CGCAGACGGATTACGCCTATACGCTGGACACATCCTCGGGTAATGTCTTC
TATGATATTTCGGATGTCTTTGGGGATCCGTTCTCCGGCAGTGTCGTCAG
CCTTGTCTCGAGTGATTCCAGCTGCGAGAGTATTTGTTGGGCTGGGGGAG
TGCCGCCCGCTGGCAGTGTTGTGAGAAGTTGTCAGGATGAGGCGGATGAG
GTGTTGACGGTTTGTGCGGATAGTTGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007577-T1.utr3p1 | KJC3_007577-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007577-T1.utr5p1 | KJC3_007577-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR037176 |
| DBxref | InterPro:IPR006771 |
| DBxref | PFAM:PF04681 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2836022..2837202 - |
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