|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2869369..2871340- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007587-T1 ID=KJC3_007587-T1|Name=KJC3_007587-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1972bp|location=Sequence derived from alignment at ch5:2869369..2871340- (Aspergillus niger KJC3)
GCTTCAACTTCCATCTCCGACCTCAACCTCCGCACGCGCGCTCCCCCCAA
CGCACATCAGACCCAACTTCGGGTCACTCTCACTCAGTTCGATGAATTGA
ACTAGTTCTCATCAATTCAACCACTAACCCCCTATCCACCTACCTACGCG
CCCACCCACCTTCAACCGCGCAGCTCCAGCTGCCACCTATCACCACCAAA
CAACCACCACCCCAATACCCTCACATACTACCACCAATATGTCGACACAC
TACAACACCGAACCCACCGCGACCGCCTCCGCAACCCTACACACGACCCT
CGGCCCCCTGCACATCGCGCTCTTCGCCTCCCAAACGCCCCTAACATGCC
GGAACTTCCTCCAACACATCCAAGACAACTACTACGCAGGGACAATCTTC
CACCGGATCATCCCAAACTTCATCCTCCAAGGCGGCGATCCAACCGGTAC
CGGCTCAGGCGGAACATCCATCTACGAGGAACCTGAATTTGAATACGACC
CGACAGCGCGCGATCCCAACGAGAAAGTCGTTTTGCGCGATGAACTGCAC
AGTCGGTTACGGTTCAATCGGCGTGGATTGGTGGGGATGGCGAAAGCGGA
GGATGGGAGCTACGGAAGTCAGTTCTTCATTACGTTGGGGGATGCGAGTC
GCGAGTTGAATGGGCAGTGTACGTTGTTTGGGAGGATTGAGGGAAACAGT
ATTTATAATGTGTTGAAGATTGCGGAGGGGGAGGTGGTCGAAGGGACGGA
GAGGCCGGTCTATCCTGTTAGGGTTACCGGGTGTGAGGTGGGCGAGTTGG
GGCCGTTGGAGGGGAAGATTGTGAAGAGGGATTTGACGGCGAGAAGTTCT
GCTACTGCTGCGGGTACTGGTGAAGGGAAGGGGGAGAAGAAGGCGGCGCA
GGCGAAGAAGAAGGGAAAGGCGAAGGGAGGGAAGACGCTGCTGAGCTTTG
GCGATGATGAGGGAGAGGAGGGTGAGGAGATGCCTGTCAGGCCGGCGAAG
CCGAAATATAATGCTGCGCTGGTGACGGATACAGCTGGGAATGGCGATGC
GCAACCGGCAGAGAAGAAGAAGCTGAAGGCGAGGAAGGCGTCGCCGTCAC
CACCGCCACGCAAACGCGCATCACCCACCCCTCCACCCATCGACCGACCC
AAGACTCCCGACCCAGCGACACAACTCCCTCTTCGCGATCCAGAATCTCC
CGAGCGCTCTCCCAGCCCGGAAGAACAGCCAGCGCAAAAGTCCAAACTAG
AGCGGACCAACGCCGAGATCGAATCCTTGAAAGCCTCGATGCGCCGCACC
GTAACCACCGAGTCGGACACAGGACGCAAGAAATCCGCATTGGAAGCCAT
GATCCCTCAGACAGCAATCCGCGGCCGCAAACGCCCACCACCCGGATCCT
CAGCAAGTAACAGCGCCAGCAACGGCATAACGGGATTCTCCAGCACCAGC
GACAACGCTGCATTGAAGATGTTCAACGCCTTCAAAGCGAAACTCGAAAA
CGCCGATTCAACCACCACTACCAGCACCAGCACTAGCAGCAAACCCCAAC
CCAAATCCCAGAAAGAGAAAGAAGAAGACGACGAAGACGACGAAGAATCC
CAGCTCTGCGACCTCCACTTCATCGTAAACTGCCAATCATGCAAATCCTG
GTCTGACAACAACGCAACCGCCCCCGATGCCGCCGATGGCGACGAAGGGA
CACAGTTAGGCGATGACACAGACCAAGGATGGTTAACGCACCAGCTCCGC
TTCGGGAAAGATACACTGGGCAAGGACCTGAAATGGAAGAAGGAGCATCC
GGACGATGTGGATAGTTTGATGGTGATTGATCCGCGGGAGAAGGAGAAGG
ACATTGTTGCGTCGGGGTCTGGGTCTGGGAGGAGAAAGAGGGGAATGATG
GAACGGGACCGTGAGAGGGATAGGAAGAGGGGGAGGGTGGGGGACTTGGA
GTGGGAGAAGGGGAGGAAATGA back to topCoding sequence (CDS) from alignment at ch5:2869369..2871340- >KJC3_007587-T1 ID=KJC3_007587-T1|Name=KJC3_007587-T1|organism=Aspergillus niger KJC3|type=CDS|length=1734bp|location=Sequence derived from alignment at ch5:2869369..2871340- (Aspergillus niger KJC3)
ATGTCGACACACTACAACACCGAACCCACCGCGACCGCCTCCGCAACCCT
ACACACGACCCTCGGCCCCCTGCACATCGCGCTCTTCGCCTCCCAAACGC
CCCTAACATGCCGGAACTTCCTCCAACACATCCAAGACAACTACTACGCA
GGGACAATCTTCCACCGGATCATCCCAAACTTCATCCTCCAAGGCGGCGA
TCCAACCGGTACCGGCTCAGGCGGAACATCCATCTACGAGGAACCTGAAT
TTGAATACGACCCGACAGCGCGCGATCCCAACGAGAAAGTCGTTTTGCGC
GATGAACTGCACAGTCGGTTACGGTTCAATCGGCGTGGATTGGTGGGGAT
GGCGAAAGCGGAGGATGGGAGCTACGGAAGTCAGTTCTTCATTACGTTGG
GGGATGCGAGTCGCGAGTTGAATGGGCAGTGTACGTTGTTTGGGAGGATT
GAGGGAAACAGTATTTATAATGTGTTGAAGATTGCGGAGGGGGAGGTGGT
CGAAGGGACGGAGAGGCCGGTCTATCCTGTTAGGGTTACCGGGTGTGAGG
TGGGCGAGTTGGGGCCGTTGGAGGGGAAGATTGTGAAGAGGGATTTGACG
GCGAGAAGTTCTGCTACTGCTGCGGGTACTGGTGAAGGGAAGGGGGAGAA
GAAGGCGGCGCAGGCGAAGAAGAAGGGAAAGGCGAAGGGAGGGAAGACGC
TGCTGAGCTTTGGCGATGATGAGGGAGAGGAGGGTGAGGAGATGCCTGTC
AGGCCGGCGAAGCCGAAATATAATGCTGCGCTGGTGACGGATACAGCTGG
GAATGGCGATGCGCAACCGGCAGAGAAGAAGAAGCTGAAGGCGAGGAAGG
CGTCGCCGTCACCACCGCCACGCAAACGCGCATCACCCACCCCTCCACCC
ATCGACCGACCCAAGACTCCCGACCCAGCGACACAACTCCCTCTTCGCGA
TCCAGAATCTCCCGAGCGCTCTCCCAGCCCGGAAGAACAGCCAGCGCAAA
AGTCCAAACTAGAGCGGACCAACGCCGAGATCGAATCCTTGAAAGCCTCG
ATGCGCCGCACCGTAACCACCGAGTCGGACACAGGACGCAAGAAATCCGC
ATTGGAAGCCATGATCCCTCAGACAGCAATCCGCGGCCGCAAACGCCCAC
CACCCGGATCCTCAGCAAGTAACAGCGCCAGCAACGGCATAACGGGATTC
TCCAGCACCAGCGACAACGCTGCATTGAAGATGTTCAACGCCTTCAAAGC
GAAACTCGAAAACGCCGATTCAACCACCACTACCAGCACCAGCACTAGCA
GCAAACCCCAACCCAAATCCCAGAAAGAGAAAGAAGAAGACGACGAAGAC
GACGAAGAATCCCAGCTCTGCGACCTCCACTTCATCGTAAACTGCCAATC
ATGCAAATCCTGGTCTGACAACAACGCAACCGCCCCCGATGCCGCCGATG
GCGACGAAGGGACACAGTTAGGCGATGACACAGACCAAGGATGGTTAACG
CACCAGCTCCGCTTCGGGAAAGATACACTGGGCAAGGACCTGAAATGGAA
GAAGGAGCATCCGGACGATGTGGATAGTTTGATGGTGATTGATCCGCGGG
AGAAGGAGAAGGACATTGTTGCGTCGGGGTCTGGGTCTGGGAGGAGAAAG
AGGGGAATGATGGAACGGGACCGTGAGAGGGATAGGAAGAGGGGGAGGGT
GGGGGACTTGGAGTGGGAGAAGGGGAGGAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006457 | protein folding |
| GO:0000413 | protein peptidyl-prolyl isomerization |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007587-T1.utr5p1 | KJC3_007587-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020892 |
| DBxref | InterPro:IPR029000 |
| DBxref | InterPro:IPR002130 |
| DBxref | PFAM:PF00160 |
| Product | Peptidyl-prolyl isomerase cwc27 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2869369..2871340 - |
|
