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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2881484..2883568+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007593-T1 ID=KJC3_007593-T1|Name=KJC3_007593-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2085bp|location=Sequence derived from alignment at ch5:2881484..2883568+ (Aspergillus niger KJC3)
CCAACTCCCTCAGCCACCCTGGCCCTGCCCTGCCATTATGAACAGTTTCC
ATCCATCTCTTCCTTCCGTCATCATTTTCCCGTACTATCATTGACCCTCC
AGGACACCCTCACGTATCAAGCCCTTTTTGGAAGAATTCGACTGGGCTTG
TCTTGTCTTCTCCAGTTGAATCCCCCCATATCAGCTAAATGGATACCATT
ATCTCAGCAGAACCTTCACACAGAAGACCAAAACCGACCGACAGCTTGCG
TCTGGTGAACCAGTCAGAGCCAGACAGCAAGGGCAGGAGTTCGACGAAGG
CCACCGACCATGAAAGCGTATCCGAGTTCACATATCCTGAAGGCGGTTTC
GCTGCTTGGACTGTTGCGATCGGCTGTTGGTGCTCGATGACCGCAGGCTT
AGGCCTTGTTAATTCAGTCGGCGTCTTGGAGGCCTATGTCTCCTACAACA
TGCTTCCTTCCTCCTCCCCCAGTGCCATAGGTTGGATTTTTGGCATCTAC
GTTTTTATTTCGTACTTCTGCGGTGTACAAATCGGCCCTATCTTTGATGC
AAGAGGTCCACGAGAGTTGATGATTCTGGGCACTGTCTGCTCGCTTGCTG
GAATATTCTGTCTGGGTCTCTGCACAGGTACAGTCCCCTTGACCGGTTCC
CAGGCCCACGCAGCTAATTCTTCTTTCTTTTCTTTTCTTCCAGAATACTA
TCAGTTCATCCTGTCATTGTCCATCCTTAACGGCATTGGTTCCTCCTTTC
TCTTCACTCCGGCTATGGGCACTATATCGCACTGGTTCAACGCTAAGCGC
GGCTTGGCCAGCGGCTTCGCTTTCACGGGCAGCGGACTTGGAGGCGTGAT
ATTCCCGCTAATGTTGCAGTCATTAATTCCACGCCTGGGTTGGGGATGGT
CGATGCGCTTGGTAGGGTTTGTGCTTCTCTTTCTATGTATTCTCAGTGTA
GTGCTCTGCCGGAGCCGCCTGCCACCGAAGCGTGGTGCAACAAGCTCTTG
GCGTGACGTTCTACCCAGTGCAGCCATCTTCCGCGATGGAACTGGCGCGA
TGGCCGTCACATCTGCCGGAGTCTTCTTAGTCGAATGGGCATACTTCGTT
CCCATCACTTACCTACCGACATACTACCTCACAAGAAAAGGGCTATCTGG
CCGGCAAGCAATAGTTGATAGTGATGCGGCTTTTGCTTACCGATTGCTCG
CCATCCTTAATTCAGTTTCCTGCCTTGGGCGTTTCTTTATCGGTTATATT
GCCGACAGAATAGGGCGGTACAATACCATGATCGTCTCGACCTTGCTATG
TCTGGTTTCTGTGATGTGTCTATGGTTACCAGATGCGATGGCCGATTCGC
CCCCAACTCTGGCGCTTATCATCGCTTTTGTCATCCTGTTCGGATTTGCA
AGTGGCTCAAACATAAGCTTGACGCCTGTCTGTGTTGGGCAGCTATGCGG
GACACAGGACTATGGTCGGTATTATGCGAGCGCGTATACATTGGTTAGTT
TCGGGTGTTTGACCGGCATTCCTATTGCCGGGAGCCTGATGAAGGCTACT
GATGATTCTGGCAGGAAGAGCTTCTGGGGGGTTATTTTGTTTACAGGGAT
GAGTTACATTGCCTCATTTGCATGCTTCCTATGGGTGCGAGTGCGTATCA
AGGGCTGGAACTGGAAAGTTATTTGGTAGTTTGACGTATTTAGACACTAC
TTCCCTCCCTGTATAGTAAGACAACCCTGATAGGATGACTTGGTATGAGC
AGGAGGTGATATCTTCGCTATTGAGGACTGTGTGTAGGTCTCCTGATTCC
TCTTCCTGTCTGCCACACTCCCCACTCAAGACAGGAAAACATTTCGCCGC
ATGTGAAAGTTGCTGGACAGAGCAATGTGGAACGATCCGAGATCCGCATC
AAAGTGTTTTTGCTTTTATCTTCAATTGGGCTGGTGTTGGCGGCAAGCCG
ACCAGGCTATCTGTCAGCTGGTAAGCAATTGTAATGATAATCGGCATAGC
AGATTGATGCTTGTATCTCCTATCTGCTCTGTACTCACCAATGCTCTTGG
ATGACTTGCATGCTGTTGGAATGGTATGTTAACTC back to topCoding sequence (CDS) from alignment at ch5:2881484..2883568+ >KJC3_007593-T1 ID=KJC3_007593-T1|Name=KJC3_007593-T1|organism=Aspergillus niger KJC3|type=CDS|length=1491bp|location=Sequence derived from alignment at ch5:2881484..2883568+ (Aspergillus niger KJC3)
ATGGATACCATTATCTCAGCAGAACCTTCACACAGAAGACCAAAACCGAC
CGACAGCTTGCGTCTGGTGAACCAGTCAGAGCCAGACAGCAAGGGCAGGA
GTTCGACGAAGGCCACCGACCATGAAAGCGTATCCGAGTTCACATATCCT
GAAGGCGGTTTCGCTGCTTGGACTGTTGCGATCGGCTGTTGGTGCTCGAT
GACCGCAGGCTTAGGCCTTGTTAATTCAGTCGGCGTCTTGGAGGCCTATG
TCTCCTACAACATGCTTCCTTCCTCCTCCCCCAGTGCCATAGGTTGGATT
TTTGGCATCTACGTTTTTATTTCGTACTTCTGCGGTGTACAAATCGGCCC
TATCTTTGATGCAAGAGGTCCACGAGAGTTGATGATTCTGGGCACTGTCT
GCTCGCTTGCTGGAATATTCTGTCTGGGTCTCTGCACAGGTACAGTCCCC
TTGACCGGTTCCCAGGCCCACGCAGCTAATTCTTCTTTCTTTTCTTTTCT
TCCAGAATACTATCAGTTCATCCTGTCATTGTCCATCCTTAACGGCATTG
GTTCCTCCTTTCTCTTCACTCCGGCTATGGGCACTATATCGCACTGGTTC
AACGCTAAGCGCGGCTTGGCCAGCGGCTTCGCTTTCACGGGCAGCGGACT
TGGAGGCGTGATATTCCCGCTAATGTTGCAGTCATTAATTCCACGCCTGG
GTTGGGGATGGTCGATGCGCTTGGTAGGGTTTGTGCTTCTCTTTCTATGT
ATTCTCAGTGTAGTGCTCTGCCGGAGCCGCCTGCCACCGAAGCGTGGTGC
AACAAGCTCTTGGCGTGACGTTCTACCCAGTGCAGCCATCTTCCGCGATG
GAACTGGCGCGATGGCCGTCACATCTGCCGGAGTCTTCTTAGTCGAATGG
GCATACTTCGTTCCCATCACTTACCTACCGACATACTACCTCACAAGAAA
AGGGCTATCTGGCCGGCAAGCAATAGTTGATAGTGATGCGGCTTTTGCTT
ACCGATTGCTCGCCATCCTTAATTCAGTTTCCTGCCTTGGGCGTTTCTTT
ATCGGTTATATTGCCGACAGAATAGGGCGGTACAATACCATGATCGTCTC
GACCTTGCTATGTCTGGTTTCTGTGATGTGTCTATGGTTACCAGATGCGA
TGGCCGATTCGCCCCCAACTCTGGCGCTTATCATCGCTTTTGTCATCCTG
TTCGGATTTGCAAGTGGCTCAAACATAAGCTTGACGCCTGTCTGTGTTGG
GCAGCTATGCGGGACACAGGACTATGGTCGGTATTATGCGAGCGCGTATA
CATTGGTTAGTTTCGGGTGTTTGACCGGCATTCCTATTGCCGGGAGCCTG
ATGAAGGCTACTGATGATTCTGGCAGGAAGAGCTTCTGGGGGGTTATTTT
GTTTACAGGGATGAGTTACATTGCCTCATTTGCATGCTTCCTATGGGTGC
GAGTGCGTATCAAGGGCTGGAACTGGAAAGTTATTTGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007593-T1.utr5p1 | KJC3_007593-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007593-T1.utr3p1 | KJC3_007593-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2881484..2883568 + |
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