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KJC3_007605-T1, KJC3_007605-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007605-T1
Unique NameKJC3_007605-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2907206..2908595+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007605-T1 ID=KJC3_007605-T1|Name=KJC3_007605-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1390bp|location=Sequence derived from alignment at ch5:2907206..2908595+ (Aspergillus niger KJC3)
CTCTCCTATTGTATCTACCTATCCCCTCCTTAGACCGGCTCTAAGGATAA
CCCGCACTACATTTTCCTGCAGCTCGCAATGCCGGTACTATCCCATTTTC
TATCTTCCTCTCCATGAAACTCTCCAGACAAATTGACTAATCCCATTCTA
GGCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGGTA
CGCCGCACTCTCCCCGCCATACACTTACCTAGCTACACCCCATACATCGA
GAGCTACCTCCACCATACACTCCAGCCCACCTCCGTATCAGCAGTCCAAC
TAATATCCATTGATAGGAAACTTCCCCATCCTCCCCCTCCGCACACGCAC
CCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCA
CCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGACGAGATCCTC
TCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCC
CGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGG
GGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGTATGCTTT
GCTTGCCCTTGTCGTGCTGAGTTGTGAGGGGTTGGTGGTGGCTGTTCGAT
GTTAGGTGTTGCTTAATGAGGTGAGCGTGCTAATGGGTACTGTTGCAGGC
ATTGATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCT
TCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAG
ACGTTGAGACAGTACGTTTATTCTTTTTCGGCCCTCTTCGACTGAGGTCT
GTGTTGGAGAGTGCTGATTTGGCTGTAATAGGTACCTTTCGCAAGTTAGG
CAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAAGG
GCCTTCGAAGGTATGTATTTCTTTCTTTCTACCCTGCAATTACAGATGGG
AGGCTAATTAGGGTGTAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCAT
GGGAAAGAGCTTCTAGGATGATTGATTGGTTGATTGATTGATAGATAGAT
GGATGTGCTTTTGTCTGCTGCCACAACTCAGCGTATGAACAAACTCGAAA
CTGGACCTTTAGTTGTTGTCCGTGTCTAGTCACTTTTACTCTGTGTATAT
TTCAACTTTAAGCGTTTTGATCCAATTGCTTTGTGTTTGGTTGGTATCAT
TTCCGATGGTGTCGGTGACGAATATCCTGGAGCTGTCGGGCAGATGGCTC
CCTCTTATCACTTCGACGGGGCTCTTTATTTCATGTAGTGATGTTCACAT
GGTATATTCTTTCAGCCCATTCCCGGCTATCTTACAGGTA
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Coding sequence (CDS) from alignment at ch5:2907206..2908595+

>KJC3_007605-T1 ID=KJC3_007605-T1|Name=KJC3_007605-T1|organism=Aspergillus niger KJC3|type=CDS|length=3402bp|location=Sequence derived from alignment at ch5:2907206..2908595+ (Aspergillus niger KJC3)
ATGCCGGCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAAT
AGGAAACTTCCCCATCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCAT
ACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCACCGATGTGCCCGCC
GACAGCGAATCCTACGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGC
CAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATGC
TCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCC
GGTATGGCTATGCGGGAGGCTGAGAAGGCATTGATCAACGTTGCGCTCGA
CCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTG
AGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACCTTTCG
CAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGG
TGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCA
TGGGAAAGAGCTTCTAGATGCCGGCATACCACTCCATCTTCCTCGAGGAT
CGGGATGTCCCCGTAATAGGAAACTTCCCCATCCTCCCCCTCCGCACACG
CACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGACA
CCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGACGAGATC
CTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGG
CCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCT
TGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATTG
ATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCCC
TTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACGT
TGAGACAGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCAT
GCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTTT
CGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGATGCCGGCATACCACT
CCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGGAAACTTCCCCATC
CTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGCT
CCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCCTACG
ACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGT
AACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTT
GTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGG
AGGCTGAGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCCC
GGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCG
TCAGGATGCGGAGACGTTGAGACAGTACCTTTCGCAAGTTAGGCAGGAGA
TCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTCG
AAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTA
GATGCCGGCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAA
TAGGAAACTTCCCCATCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCA
TACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCACCGATGTGCCCGC
CGACAGCGAATCCTACGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCG
CCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATG
CTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCC
CGGTATGGCTATGCGGGAGGCTGAGAAGGCATTGATCAACGTTGCGCTCG
ACCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTT
GAGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACCTTTC
GCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCG
GTGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTC
ATGGGAAAGAGCTTCTAGATGCCGGCATACCACTCCATCTTCCTCGAGGA
TCGGGATGTCCCCGTAATAGGAAACTTCCCCATCCTCCCCCTCCGCACAC
GCACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGAC
ACCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGACGAGAT
CCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATG
GCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGC
TTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATT
GATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCC
CTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACG
TTGAGACAGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCA
TGCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGTGGTGGCTTAGTT
TCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGATGCCGGCATACCAC
TCCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGGAAACTTCCCCAT
CCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGC
TCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCCTAC
GACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCG
TAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCT
TGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGG
GAGGCTGAGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCC
CGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATC
GTCAGGATGCGGAGACGTTGAGACAGTACCTTTCGCAAGTTAGGCAGGAG
ATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTC
GAAGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007605KJC3_007605Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007605-T1KJC3_007605-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007605-T1.utr5p1KJC3_007605-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007605-T1.exon1KJC3_007605-T1.exon1Aspergillus niger KJC3exon
KJC3_007605-T1.exon2KJC3_007605-T1.exon2Aspergillus niger KJC3exon
KJC3_007605-T1.exon3KJC3_007605-T1.exon3Aspergillus niger KJC3exon
KJC3_007605-T1.exon4KJC3_007605-T1.exon4Aspergillus niger KJC3exon
KJC3_007605-T1.exon5KJC3_007605-T1.exon5Aspergillus niger KJC3exon
KJC3_007605-T1.exon6KJC3_007605-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007605-T1.cdsKJC3_007605-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007605-T1.utr3p1KJC3_007605-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264S3E
DBxrefInterPro:IPR007204
DBxrefInterPro:IPR036753
DBxrefPFAM:PF04062
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2907206..2908595 +
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