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KJC3_007606-T1, KJC3_007606-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007606-T1
Unique NameKJC3_007606-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2908628..2910566-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007606-T1 ID=KJC3_007606-T1|Name=KJC3_007606-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1939bp|location=Sequence derived from alignment at ch5:2908628..2910566- (Aspergillus niger KJC3)
AACAAAAGCTGCTACGTTGGCGGGGTTATTGGCTCTGGTCGCTTGAATTG
ATCTTTTTGTTCTTTGCGTATAATGCGCTGATCCTTATCCCGTCACATAT
ACGTTCTAAAACCTCCCACATCATGCATTCCTACGTGCGACCAAATCAAT
TCGTCGCCTTCAAGCTCCCCTCCGAGGCGACGAGGATCCAGAAAGTCGTT
CCCAATACGTATGCGCGCAAATGCTCCAATTTCTCAGGAATCGCACAGTG
CTAATTATATTTTACAGACAAATTTCTCTAGGCAAATACGGCGCTTTCCC
CGCCAACCAGATCATTGGCCGCCCCTTCTATCTGACCTTCGAGATCCACG
AAACCCCCGGACAAGCTGATAGCACCTACCTCCGCATCGTATCGGCGGCG
GAACTCCACGCGGAATCCCTCATCACCGAGGGCGAAGGCGACGGCGATGA
TGTGGAGGTCAATGAAGACGGCACCCCGGTGCGGTCGAATCGCGAAACCA
TCGACGACCGATCTACGCAAAAGTTAACGCTAGAGGAGATTCTGGCGCTG
AAGAAGGAAAGCACCGGCGCGGGAAGGGAAATTATTGCGAAGCTGCTCGA
GTCGCATCAGGCCTTGGATCAGAAGACGGCATTCTCACTGGCCAAGTATA
AGCTGCGGAAGGAGAAGAAGTACATGAAGCGGTTCACAGTGATTCCGTTG
GATGTCAGTCTCTTGACGAACTACATGCTTGAGGACAAGGATGCAGCTCG
GACTATGGAATTGCGCGACGAGCTCATCGGGCTGATTGGGTGTTGGGGAA
ATGTACACCATGGTGGAAGCACCTCTTTTGACGAGACTGTTACGTCGAAA
CCGAATGGTCGCTATCTGGTTGTTGATGATACAGGCGGTCTGGTCGTCGC
AGCTTTGGCTGAGAGAATGGGAATTCTGTACCCTCATGATGGCGAGAACG
ATCAGGAGCAACAGGACGCCATTGAGCGACCTGCCGCGGCGGAAGCTGAT
GAGGCAGAGAAGCCCCAAGACGGCGAAGAGAAAGCCCAGGATGGAGAGGA
GCAATCCACGACGACCACACATCGCCCACCCCGTCGGCCACAGATGTCCG
CTTCAGGAAACACTATCACCCTTCTCCACGCCAACAAGCAGCCTAACCTA
AGTCTCTTGAAATACTTTGGCTACGAACAAGACAGCCCGAGCGACACACA
TCCCCTCTACACAAACCTCAAGACCGTCTCTTTCATGCAGCTGCTCGACC
CCATGGCGGACAACATCTACTCCGAGGAGCCGTCAGTAGTACCCGAAGAA
GAGCTTGCTACATACAAGGCCAGCAAGCGTAGCGCCTACCACCGCAAGCG
CGGGCGTTGGATGCGCGTCCGCAAGGTAGTCGACGAAGCTCGGGCGGGCG
GCTTCGATGGTCTCATTATCGCCTCTCTAATGAGCCCGACGAGTATCCTG
AAATATACTGTCCCATTGGTGGGAGGCTCGGCACCGATTACTATCTACTC
ACCCACCGTTGAACCGTTGACAGAGGTAATGGACTTGTATTCGACAGCGC
GCAAGAACGCCTACATCGCTCGGAAGCGTGAGCTACAAGAACAGCAACAG
GCTGAGGGCCAGGATGAGTCTGGCAAGATGCGCCCTGCACTGGAAGAGGA
ATTCACAGTCGACCCTACCATGTTGCTTGCGCCGACACTGCAGACCTCCC
GAGTACGTGTCTGGCAGGTCCTTCCTGGGCGGACACATCCGTTGATGTCG
GGACGTGGTGGTGCAGAAGGGTACATCTTCCATGGCATCCGGGTCATCCC
GACGCAGGAGATCATTGAGGCAGCTGGAAATCCAGGCCGGAAGAGGAGGA
AGGTGACCAAGGAGACAGAGACACCGACGCAGACGCAAACTCCGACGGAG
ACGCAGACAGGCAGCGGGGATGTGGAGATGACGTCGTGA
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Coding sequence (CDS) from alignment at ch5:2908628..2910566-

>KJC3_007606-T1 ID=KJC3_007606-T1|Name=KJC3_007606-T1|organism=Aspergillus niger KJC3|type=CDS|length=3516bp|location=Sequence derived from alignment at ch5:2908628..2910566- (Aspergillus niger KJC3)
ACAAATTTCTCTAGGCAAATACGGCGCTTTCCCCGCCAACCAGATCATTG
GCCGCCCCTTCTATCTGACCTTCGAGATCCACGAAACCCCCGGACAAGCT
GATAGCACCTACCTCCGCATCGTATCGGCGGCGGAACTCCACGCGGAATC
CCTCATCACCGAGGGCGAAGGCGACGGCGATGATGTGGAGGTCAATGAAG
ACGGCACCCCGGTGCGGTCGAATCGCGAAACCATCGACGACCGATCTACG
CAAAAGTTAACGCTAGAGGAGATTCTGGCGCTGAAGAAGGAAAGCACCGG
CGCGGGAAGGGAAATTATTGCGAAGCTGCTCGAGTCGCATCAGGCCTTGG
ATCAGAAGACGGCATTCTCACTGGCCAAGTATAAGCTGCGGAAGGAGAAG
AAGTACATGAAGCGGTTCACAGTGATTCCGTTGGATGTCAGTCTCTTGAC
GAACTACATGCTTGAGGACAAGGATGCAGCTCGGACTATGGAATTGCGCG
ACGAGCTCATCGGGCTGATTGGGTGTTGGGGAAATGTACACCATGGTGGA
AGCACCTCTTTTGACGAGACTGTTACGTCGAAACCGAATGGTCGCTATCT
GGTTGTTGATGATACAGGCGGTCTGGTCGTCGCAGCTTTGGCTGAGAGAA
TGGGAATTCTGTACCCTCATGATGGCGAGAACGATCAGGAGCAACAGGAC
GCCATTGAGCGACCTGCCGCGGCGGAAGCTGATGAGGCAGAGAAGCCCCA
AGACGGCGAAGAGAAAGCCCAGGATGGAGAGGAGCAATCCACGACGACCA
CACATCGCCCACCCCGTCGGCCACAGATGTCCGCTTCAGGAAACACTATC
ACCCTTCTCCACGCCAACAAGCAGCCTAACCTAAGTCTCTTGAAATACTT
TGGCTACGAACAAGACAGCCCGAGCGACACACATCCCCTCTACACAAACC
TCAAGACCGTCTCTTTCATGCAGCTGCTCGACCCCATGGCGGACAACATC
TACTCCGAGGAGCCGTCAGTAGTACCCGAAGAAGAGCTTGCTACATACAA
GGCCAGCAAGCGTAGCGCCTACCACCGCAAGCGCGGGCGTTGGATGCGCG
TCCGCAAGGTAGTCGACGAAGCTCGGGCGGGCGGCTTCGATGGTCTCATT
ATCGCCTCTCTAATGAGCCCGACGAGTATCCTGAAATATACTGTCCCATT
GGTGGGAGGCTCGGCACCGATTACTATCTACTCACCCACCGTTGAACCGT
TGACAGAGGTAATGGACTTGTATTCGACAGCGCGCAAGAACGCCTACATC
GCTCGGAAGCGTGAGCTACAAGAACAGCAACAGGCTGAGGGCCAGGATGA
GTCTGGCAAGATGCGCCCTGCACTGGAAGAGGAATTCACAGTCGACCCTA
CCATGTTGCTTGCGCCGACACTGCAGACCTCCCGAGTACGTGTCTGGCAG
GTCCTTCCTGGGCGGACACATCCGTTGATGTCGGGACGTGGTGGTGCAGA
AGGGTACATCTTCCATGGCATCCGGGTCATCCCGACGCAGGAGATCATTG
AGGCAGCTGGAAATCCAGGCCGGAAGAGGAGGAAGGTGACCAAGGAGACA
GAGACACCGACGCAGACGCAAACTCCGACGGAGACGCAGACAGGCAGCGG
GGATGTGGAGATGACGTCGTGAATGCATTCCTACGTGCGACCAAATCAAT
TCGTCGCCTTCAAGCTCCCCTCCGAGGCGACGAGGATCCAGAAAGTCGTT
CCCAATACACAAATTTCTCTAGGCAAATACGGCGCTTTCCCCGCCAACCA
GATCATTGGCCGCCCCTTCTATCTGACCTTCGAGATCCACGAAACCCCCG
GACAAGCTGATAGCACCTACCTCCGCATCGTATCGGCGGCGGAACTCCAC
GCGGAATCCCTCATCACCGAGGGCGAAGGCGACGGCGATGATGTGGAGGT
CAATGAAGACGGCACCCCGGTGCGGTCGAATCGCGAAACCATCGACGACC
GATCTACGCAAAAGTTAACGCTAGAGGAGATTCTGGCGCTGAAGAAGGAA
AGCACCGGCGCGGGAAGGGAAATTATTGCGAAGCTGCTCGAGTCGCATCA
GGCCTTGGATCAGAAGACGGCATTCTCACTGGCCAAGTATAAGCTGCGGA
AGGAGAAGAAGTACATGAAGCGGTTCACAGTGATTCCGTTGGATGTCAGT
CTCTTGACGAACTACATGCTTGAGGACAAGGATGCAGCTCGGACTATGGA
ATTGCGCGACGAGCTCATCGGGCTGATTGGGTGTTGGGGAAATGTACACC
ATGGTGGAAGCACCTCTTTTGACGAGACTGTTACGTCGAAACCGAATGGT
CGCTATCTGGTTGTTGATGATACAGGCGGTCTGGTCGTCGCAGCTTTGGC
TGAGAGAATGGGAATTCTGTACCCTCATGATGGCGAGAACGATCAGGAGC
AACAGGACGCCATTGAGCGACCTGCCGCGGCGGAAGCTGATGAGGCAGAG
AAGCCCCAAGACGGCGAAGAGAAAGCCCAGGATGGAGAGGAGCAATCCAC
GACGACCACACATCGCCCACCCCGTCGGCCACAGATGTCCGCTTCAGGAA
ACACTATCACCCTTCTCCACGCCAACAAGCAGCCTAACCTAAGTCTCTTG
AAATACTTTGGCTACGAACAAGACAGCCCGAGCGACACACATCCCCTCTA
CACAAACCTCAAGACCGTCTCTTTCATGCAGCTGCTCGACCCCATGGCGG
ACAACATCTACTCCGAGGAGCCGTCAGTAGTACCCGAAGAAGAGCTTGCT
ACATACAAGGCCAGCAAGCGTAGCGCCTACCACCGCAAGCGCGGGCGTTG
GATGCGCGTCCGCAAGGTAGTCGACGAAGCTCGGGCGGGCGGCTTCGATG
GTCTCATTATCGCCTCTCTAATGAGCCCGACGAGTATCCTGAAATATACT
GTCCCATTGGTGGGAGGCTCGGCACCGATTACTATCTACTCACCCACCGT
TGAACCGTTGACAGAGGTAATGGACTTGTATTCGACAGCGCGCAAGAACG
CCTACATCGCTCGGAAGCGTGAGCTACAAGAACAGCAACAGGCTGAGGGC
CAGGATGAGTCTGGCAAGATGCGCCCTGCACTGGAAGAGGAATTCACAGT
CGACCCTACCATGTTGCTTGCGCCGACACTGCAGACCTCCCGAGTACGTG
TCTGGCAGGTCCTTCCTGGGCGGACACATCCGTTGATGTCGGGACGTGGT
GGTGCAGAAGGGTACATCTTCCATGGCATCCGGGTCATCCCGACGCAGGA
GATCATTGAGGCAGCTGGAAATCCAGGCCGGAAGAGGAGGAAGGTGACCA
AGGAGACAGAGACACCGACGCAGACGCAAACTCCGACGGAGACGCAGACA
GGCAGCGGGGATGTGGAGATGACGTCGTGAATGCATTCCTACGTGCGACC
AAATCAATTCGTCGCCTTCAAGCTCCCCTCCGAGGCGACGAGGATCCAGA
AAGTCGTTCCCAATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031515tRNA (m1A) methyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0030488tRNA methylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRM6KJC3_007606Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007606-T1KJC3_007606-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007606-T1.cdsKJC3_007606-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007606-T1.exon2KJC3_007606-T1.exon2Aspergillus niger KJC3exon
KJC3_007606-T1.exon1KJC3_007606-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007606-T1.utr5p1KJC3_007606-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261I0F
DBxrefInterPro:IPR017423
DBxrefPFAM:PF04189
ProducttRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2908628..2910566 -
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