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KJC3_007611-T1, KJC3_007611-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007611-T1
Unique NameKJC3_007611-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2928458..2929483-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007611-T1 ID=KJC3_007611-T1|Name=KJC3_007611-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1026bp|location=Sequence derived from alignment at ch5:2928458..2929483- (Aspergillus niger KJC3)
ATAATAACTGCCTCTATCCAACTACCTCTTACCCCACCTATACACTTTCT
CGCTCTACATACAGGCTACCTCATTCTCGGACAAGATAGAAAATTGCCAA
GATGTCAGAAGTCGCCTTCATCAAATCCTTCCTCTCTTCGCTCGACTCCC
GCCCTATCAAGCTCCGAGCAGACTATGTCCTCGACGAAGAGCGAGTTGGA
CCTCGCGTCCCTGTACGTGAAACCATTCCATCCAAAGACCTCCCTCATAC
ACTCCAAATGCAAGATATTAACAGGAAAATGAACAGTACCTCCTCCCCCG
CCTCAGCGCCCCCCACCCGGAAATGCCCAAGAAAGTGCAGCGCACGCAAG
CCCCCGGCTCGTCGAAATCCATAACCGTGCACCTGAAGAGCGCGCGCAAC
CCCGCATTCGAATTCTCGCTACCCAATGCACCCATCACCACGACCTCGGT
GCAGGACCTCAAAGACGCAGTCCAGGAACGGGTCGTTGACGCACAGGACG
GAAAGGTGTCGGTGGAGAAGATCAAGATTCTGTATAAGCGAAAGCCGGTG
ACGGGGAAGACGATCGCGGAGTTGCTGGCTGATGAGCCTGAGATGTTGGC
TGGAGGCAAGGAGGTGGAGTTTGGGGTGATGATAATGGGAGGGGCAAAGG
TTGTGGAAGGAGGCAGTAGTGGTGAGGGGGATGTGAGTGCTGCTGCTGCG
CCTAAGGCGGCGGTTGGGCCGAGTGGGGAGGAGGTGTTGAGGATGGAGGC
GTTCTGGGATGATTTGCAGGGGTTCTTGGAGCAGAGGTTGAAGGATAGTG
AGGAGGCGAGGAGGTTGAGGGGGGTGTTTAAGGGAGCTTGGGAGAAGCAA
TAAGCTGCCAGTTATTGAGATTCATGTATTGAAGCGTACAGTGCTTTAAT
GGTGGGCAGGTGTGTATGTATGTAATATGATACCTTGTCATGGATTTATT
TTGACATTGATTTGGATATGTGGCGAGATTTCATTGCATATGGGAGATTG
CATTGGGGTGGAATATGTGAGCTGGA
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Coding sequence (CDS) from alignment at ch5:2928458..2929483-

>KJC3_007611-T1 ID=KJC3_007611-T1|Name=KJC3_007611-T1|organism=Aspergillus niger KJC3|type=CDS|length=1356bp|location=Sequence derived from alignment at ch5:2928458..2929483- (Aspergillus niger KJC3)
TACCTCCTCCCCCGCCTCAGCGCCCCCCACCCGGAAATGCCCAAGAAAGT
GCAGCGCACGCAAGCCCCCGGCTCGTCGAAATCCATAACCGTGCACCTGA
AGAGCGCGCGCAACCCCGCATTCGAATTCTCGCTACCCAATGCACCCATC
ACCACGACCTCGGTGCAGGACCTCAAAGACGCAGTCCAGGAACGGGTCGT
TGACGCACAGGACGGAAAGGTGTCGGTGGAGAAGATCAAGATTCTGTATA
AGCGAAAGCCGGTGACGGGGAAGACGATCGCGGAGTTGCTGGCTGATGAG
CCTGAGATGTTGGCTGGAGGCAAGGAGGTGGAGTTTGGGGTGATGATAAT
GGGAGGGGCAAAGGTTGTGGAAGGAGGCAGTAGTGGTGAGGGGGATGTGA
GTGCTGCTGCTGCGCCTAAGGCGGCGGTTGGGCCGAGTGGGGAGGAGGTG
TTGAGGATGGAGGCGTTCTGGGATGATTTGCAGGGGTTCTTGGAGCAGAG
GTTGAAGGATAGTGAGGAGGCGAGGAGGTTGAGGGGGGTGTTTAAGGGAG
CTTGGGAGAAGCAATAAATGTCAGAAGTCGCCTTCATCAAATCCTTCCTC
TCTTCGCTCGACTCCCGCCCTATCAAGCTCCGAGCAGACTATGTCCTCGA
CGAAGAGCGAGTTGGACCTCGCGTCCCTTACCTCCTCCCCCGCCTCAGCG
CCCCCCACCCGGAAATGCCCAAGAAAGTGCAGCGCACGCAAGCCCCCGGC
TCGTCGAAATCCATAACCGTGCACCTGAAGAGCGCGCGCAACCCCGCATT
CGAATTCTCGCTACCCAATGCACCCATCACCACGACCTCGGTGCAGGACC
TCAAAGACGCAGTCCAGGAACGGGTCGTTGACGCACAGGACGGAAAGGTG
TCGGTGGAGAAGATCAAGATTCTGTATAAGCGAAAGCCGGTGACGGGGAA
GACGATCGCGGAGTTGCTGGCTGATGAGCCTGAGATGTTGGCTGGAGGCA
AGGAGGTGGAGTTTGGGGTGATGATAATGGGAGGGGCAAAGGTTGTGGAA
GGAGGCAGTAGTGGTGAGGGGGATGTGAGTGCTGCTGCTGCGCCTAAGGC
GGCGGTTGGGCCGAGTGGGGAGGAGGTGTTGAGGATGGAGGCGTTCTGGG
ATGATTTGCAGGGGTTCTTGGAGCAGAGGTTGAAGGATAGTGAGGAGGCG
AGGAGGTTGAGGGGGGTGTTTAAGGGAGCTTGGGAGAAGCAATAAATGTC
AGAAGTCGCCTTCATCAAATCCTTCCTCTCTTCGCTCGACTCCCGCCCTA
TCAAGCTCCGAGCAGACTATGTCCTCGACGAAGAGCGAGTTGGACCTCGC
GTCCCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007611KJC3_007611Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007611-T1KJC3_007611-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007611-T1.cdsKJC3_007611-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007611-T1.utr3p1KJC3_007611-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007611-T1.exon2KJC3_007611-T1.exon2Aspergillus niger KJC3exon
KJC3_007611-T1.exon1KJC3_007611-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007611-T1.utr5p1KJC3_007611-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefPFAM:PF17183
DBxrefPFAM:PF12754
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2928458..2929483 -
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