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KJC3_007612-T1, KJC3_007612-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007612-T1
Unique NameKJC3_007612-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2929564..2932209+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007612-T1 ID=KJC3_007612-T1|Name=KJC3_007612-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2646bp|location=Sequence derived from alignment at ch5:2929564..2932209+ (Aspergillus niger KJC3)
GGCCATTATGGGCACACCGCCTTGCGGGACTCTTTCTGCCGTCGCCAACC
GCCCGCAGAAAAAAAAGTAACGAAAAGAAAAAAGTCTGGATTCTCCGCTG
TAGACCCCAGTTATCCAACTTTCACCCCCCTTTCACATTCACATTTTCAC
TATGGGTGTCGGTCGTCGTATGAAGAAGCAGGGCCCTCCGGCCCCGCTGG
ATGAGTCTAAGATCACCATCTTCAAGAAGCGCAAGGCTGGTGAGCCCGAG
TCGAAGCCGGAGACGGGAAAGAAGCGGAGAAGAGCTGATGCCGATGAGGA
GAATGTCGCAAAGCCCGTCGTCAAGAAGAAGGCCAATGGCGCTGCTAATG
GCAAGGCGACCAAGGCTGCGGCTAAGCCCAAGGCTGAGACTAAGCCCAAG
GCTAAGGCTGTCGAGAAGAAGCCGCAGTTCATGGATTCCGACGATGAGGA
CGAGGATGAGGATATGTCCGGTATTGAGGAAATGGATGCCGATGAGTTCG
ACGATCTGGATGGCGTCAGTGATGGCTCCATGGATAGCCAGGAGGAGGAC
AACGACTCTTTCGTGGACTCCGACGAAGATGACCACCCTCGCGAAGCCAT
GTTCTCCGACGACGAAGACCTTTCCGACGCTGAAGAGAGGCTGACCGCCG
CCAACATCGAGGGATTGTCGCGCAAGCTGGACCTGCAAAGACAGGAAGAA
GAGGAGGAGGCCGAGCGCGAAATGAAGGAATCGGCCATGCAGACCAACAT
CGCTGGTGACCGTCCCGATGTCTTTGGCGACGCCGAGGGCACTCAGCCCG
GCCTGGCTCCCGATCTTCAGCTGCTTCGTACCCGAATCACCGACACCATC
CGTATCCTGGGTGACCTGAAGACGCTTGGTGCCCCCGGCAAGTCTCGTAC
CGATTACACTGAGCTGCTCATCGCCGACATCTGCACCTACTATGGCTACA
CCCCCTACCTCGCCGAGAAGCTCTTCAACCTCTTCACCCCCATGGAAGCC
TTCGCCTTCTTCGAAGCCAACGAAACCCCCCGTCCCGTCGTCATCCGTAC
CAACACCCTCCGTACCAACCGTCGTTCCCTCGCCCAGGCTCTGATCAACC
GTGGTGTCGTGCTTGAGCCCGTTGGCAAGTGGTCCAAGGTTGGTCTTCAG
GTCTTCGAATCCGCTGTTCCCCTCGGTGCCACCCCCGAGTACCTGGCCGG
TCACTACATCATCCAGGCCGCCTCTTCCTTCCTCCCCGTCATGGCCCTCG
CCCCTCAACCCAACGAGCGTGTTCTCGATATGGCCTCCGCCCCCGGTGGT
AAGACCACCTACATCTCTGCCCTGATGCGCAACACCGGCTGCGTCATCGC
CAACGATGCCAGCAAGCCTCGTGCCAAGGGTCTGATCGGTAACATCCACC
GTCTGGGCTGCAAGAACACCATCGTGACCAACATGGACGCCCGCACCGCC
TTCCCCAAGGCCATGGGCGGTTTCGACCGTGTCCTGCTCGATGCCCCTTG
CACCGGTACCGGTGTTATTTCCAAGGACCCCGGCGTCAAGACCTCCAAGA
ACGAGCGCGACTTCCTCGCCATCCCCCACATGCAGCGCCAGCTTCTTCTG
GCCGCCATCGACTCCGTCGACCATGCCTCCAAGACCGGCGGCTACGTCGT
CTACTCCACCTGCAGTGTCACCGTCGAGGAGAACGAAGCCGTCGTGCAGT
ACGTCCTGCGCAAGCGCCCCAACGTCAAGCTCGTCGACACCGGCCTCGGC
GACTTCGGCAGCCCCGGTATGACCAGCTACATGGGCAAGCACTTCGATCC
CAAGATGACCCTGACGAGACGCTACTTCCCCCACCGCGAGAACGTCGACG
GTTTCTTCGTCTGCAAGCTCAAGAAGACTGCCGCCACCCCTACCCCCAAG
CCTGGCGATGCCGCTGCCGCTGCCCCTACCGACGGCAACTCCGCCAAGAA
GTCCAAGACCCTCTCCGTCGCCTCCACCACCACCGATGACGACGAACCCA
TCGACAAGACCCCCATCACCGACGAAGACGGCATGGTCATTGAAACCGAA
GGCGGCAGCTTCGGTCCCTTCGAAGAAGATGAGGAGGACGCTGCTCGCAT
CGCCCGCGCTGAGCGCAACCGTCTCCGCCGCAAGGGTCTGAACCCCAAGG
CTATTCTCAACAAGCCCGCCAAGTCCAAGTCCAAGGACGAGTCATCCGCC
CCTACCGAGAAGACCGAGGAGAAGGAGAAGAAGAAGGAGGAATCCCCCAA
GAGGGAGACCCCCGCGAAGAAGGAATCCAAGGAATCCCCCAAGCCGAAGG
CCGATTCCAAGCCCACCAAGACCAAGACCGAGACAGCAGAACCCTCTACG
ACAAAGAAGCAGCAACAAAAACCCACCACCGCACAAGAACCCACAGAGAA
GAAGAAGAAGACTACTGCCAAGAAGGCAAGCAAGAAATAAGCCATCCATC
ATCGGCTTAATTCATCCTTCTTTACCTTCTTCTTCTCTTCTTTGTAATTT
ACATATGTGGTGATTGTTGATGATGTTGTTTCTTGTTTGACATAAAAAGC
ATTTGTCTTGTATTGTTGGTCTGTATGGGCGGCGCATGCACATGTCTTCT
ATTTCTCTTTTTTTTTTTTTCTTTGATATGATGATGGTGGTAGATA
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Coding sequence (CDS) from alignment at ch5:2929564..2932209+

>KJC3_007612-T1 ID=KJC3_007612-T1|Name=KJC3_007612-T1|organism=Aspergillus niger KJC3|type=CDS|length=2289bp|location=Sequence derived from alignment at ch5:2929564..2932209+ (Aspergillus niger KJC3)
ATGGGTGTCGGTCGTCGTATGAAGAAGCAGGGCCCTCCGGCCCCGCTGGA
TGAGTCTAAGATCACCATCTTCAAGAAGCGCAAGGCTGGTGAGCCCGAGT
CGAAGCCGGAGACGGGAAAGAAGCGGAGAAGAGCTGATGCCGATGAGGAG
AATGTCGCAAAGCCCGTCGTCAAGAAGAAGGCCAATGGCGCTGCTAATGG
CAAGGCGACCAAGGCTGCGGCTAAGCCCAAGGCTGAGACTAAGCCCAAGG
CTAAGGCTGTCGAGAAGAAGCCGCAGTTCATGGATTCCGACGATGAGGAC
GAGGATGAGGATATGTCCGGTATTGAGGAAATGGATGCCGATGAGTTCGA
CGATCTGGATGGCGTCAGTGATGGCTCCATGGATAGCCAGGAGGAGGACA
ACGACTCTTTCGTGGACTCCGACGAAGATGACCACCCTCGCGAAGCCATG
TTCTCCGACGACGAAGACCTTTCCGACGCTGAAGAGAGGCTGACCGCCGC
CAACATCGAGGGATTGTCGCGCAAGCTGGACCTGCAAAGACAGGAAGAAG
AGGAGGAGGCCGAGCGCGAAATGAAGGAATCGGCCATGCAGACCAACATC
GCTGGTGACCGTCCCGATGTCTTTGGCGACGCCGAGGGCACTCAGCCCGG
CCTGGCTCCCGATCTTCAGCTGCTTCGTACCCGAATCACCGACACCATCC
GTATCCTGGGTGACCTGAAGACGCTTGGTGCCCCCGGCAAGTCTCGTACC
GATTACACTGAGCTGCTCATCGCCGACATCTGCACCTACTATGGCTACAC
CCCCTACCTCGCCGAGAAGCTCTTCAACCTCTTCACCCCCATGGAAGCCT
TCGCCTTCTTCGAAGCCAACGAAACCCCCCGTCCCGTCGTCATCCGTACC
AACACCCTCCGTACCAACCGTCGTTCCCTCGCCCAGGCTCTGATCAACCG
TGGTGTCGTGCTTGAGCCCGTTGGCAAGTGGTCCAAGGTTGGTCTTCAGG
TCTTCGAATCCGCTGTTCCCCTCGGTGCCACCCCCGAGTACCTGGCCGGT
CACTACATCATCCAGGCCGCCTCTTCCTTCCTCCCCGTCATGGCCCTCGC
CCCTCAACCCAACGAGCGTGTTCTCGATATGGCCTCCGCCCCCGGTGGTA
AGACCACCTACATCTCTGCCCTGATGCGCAACACCGGCTGCGTCATCGCC
AACGATGCCAGCAAGCCTCGTGCCAAGGGTCTGATCGGTAACATCCACCG
TCTGGGCTGCAAGAACACCATCGTGACCAACATGGACGCCCGCACCGCCT
TCCCCAAGGCCATGGGCGGTTTCGACCGTGTCCTGCTCGATGCCCCTTGC
ACCGGTACCGGTGTTATTTCCAAGGACCCCGGCGTCAAGACCTCCAAGAA
CGAGCGCGACTTCCTCGCCATCCCCCACATGCAGCGCCAGCTTCTTCTGG
CCGCCATCGACTCCGTCGACCATGCCTCCAAGACCGGCGGCTACGTCGTC
TACTCCACCTGCAGTGTCACCGTCGAGGAGAACGAAGCCGTCGTGCAGTA
CGTCCTGCGCAAGCGCCCCAACGTCAAGCTCGTCGACACCGGCCTCGGCG
ACTTCGGCAGCCCCGGTATGACCAGCTACATGGGCAAGCACTTCGATCCC
AAGATGACCCTGACGAGACGCTACTTCCCCCACCGCGAGAACGTCGACGG
TTTCTTCGTCTGCAAGCTCAAGAAGACTGCCGCCACCCCTACCCCCAAGC
CTGGCGATGCCGCTGCCGCTGCCCCTACCGACGGCAACTCCGCCAAGAAG
TCCAAGACCCTCTCCGTCGCCTCCACCACCACCGATGACGACGAACCCAT
CGACAAGACCCCCATCACCGACGAAGACGGCATGGTCATTGAAACCGAAG
GCGGCAGCTTCGGTCCCTTCGAAGAAGATGAGGAGGACGCTGCTCGCATC
GCCCGCGCTGAGCGCAACCGTCTCCGCCGCAAGGGTCTGAACCCCAAGGC
TATTCTCAACAAGCCCGCCAAGTCCAAGTCCAAGGACGAGTCATCCGCCC
CTACCGAGAAGACCGAGGAGAAGGAGAAGAAGAAGGAGGAATCCCCCAAG
AGGGAGACCCCCGCGAAGAAGGAATCCAAGGAATCCCCCAAGCCGAAGGC
CGATTCCAAGCCCACCAAGACCAAGACCGAGACAGCAGAACCCTCTACGA
CAAAGAAGCAGCAACAAAAACCCACCACCGCACAAGAACCCACAGAGAAG
AAGAAGAAGACTACTGCCAAGAAGGCAAGCAAGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008757S-adenosylmethionine-dependent methyltransferase activity
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007612KJC3_007612Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007612-T1.utr5p1KJC3_007612-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007612-T1.exon1KJC3_007612-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007612-T1.cdsKJC3_007612-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007612-T1.utr3p1KJC3_007612-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007612-T1KJC3_007612-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR018314
DBxrefInterPro:IPR001678
DBxrefInterPro:IPR031341
DBxrefInterPro:IPR011023
DBxrefInterPro:IPR023273
DBxrefInterPro:IPR023267
DBxrefPFAM:PF17125
DBxrefPFAM:PF01189
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2929564..2932209 +
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