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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2952914..2954899- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007617-T1 ID=KJC3_007617-T1|Name=KJC3_007617-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1986bp|location=Sequence derived from alignment at ch5:2952914..2954899- (Aspergillus niger KJC3)
ATGCCCCCCCAATCCGCACCCACCGTCGTATTCTGGCACCGCACCGACCT
CCGCCTGCACGATAACCCAGCCCTGCAGGCTGCCCTCTCGCTCAAGCCAT
CGACCTTCATCCCGATCTTCACCTGGGACCCGCACTATGCGTATCGGGTC
CGCGTAGGCCCCAATCGCTGGCGCTTCCTGCTGGAATGCCAGAAAGATCT
CTCACAATCCTACAGCAAGCTGAACCCAAAGCAGAAGCTGTGGGTGGTTC
GCGAAGCACCTCAAACCGTTTTCCCCAAGTTATTCAAAGCATGGGGTGCG
ACGCATCTTGTGTTCGAGAGTGACACGGATGGGTATGCGCGGGAGCGCGA
TGAGACAGTTACGAAGTTGGCGAAGGAGGCAGGGGTAGAGGTTATAGTGA
AGTCTGGACGGACATTGTTCGATTCCGACGAGGTGGTGAAACATAACAAG
GGCGAGCCGACAATGAGTATTCATCAGGTGGAGAAGGCGATTGAGCAGAT
AAACAATGGGGTGCCGGATAGGCCTGTTGACGCGCCGGAGAGGATACCTG
ATCCGTTGGGGGAGGAGAAGATGAGGGATATAAGTGGGCTTGAGCATGAG
GTTCCAGATCAGGAGGATGATATAAATGCTGCACATCGAACCAAGCATAA
CGACAATCAGTACAAGAACATAGCAGGTCCCAAGGACGACTTCTCCGTTC
CCACGCTGGACGAACTCTCCATCGATCCCAGCCAAGCAACAAGCCCCCAT
CACGGCGGCGAATCCATCGCGCTGGAGATGCTGACCACCTACCTGCAACA
AAACGAAGACTTCATCGCCACATTCGAAAAGCCCAAGACTTCCCCCGCGG
CCTTCCACCCACAAGCTACGACCCTCCTCTCGCCGCATCTGCACTTCGGC
TCTCTCTCCGTGCGCAAATTCTGGCATGACGTGCAGGATACCCTCCAGCA
GCACGAATCAGCCCACAAGCCTACCTCAGACCTCCCTACTAACCTCCCTG
GACAACTCCTCTTCCGGGAAATGTTCTTCGCTGCGCAAGCAGCTCTAGGA
CCAGTGTATGCGCAGACGCGTGGGAACAAGATCGTGCGGTTCGTTCCGTG
GCATTTACAATCTAATCATGATAAGGAGACGGGATTAGTTGATAGGACGT
ATACGGTTGACGATGAGCAAGCGGAGGTGTGGTTCCGACGGTGGAAGGAA
GGGCGGACAGGATTTCCGTGGATCGATGCGTTGATGAGACAGCTGAAGAA
TGAGGGATGGATTCATCATCTGGGGAGACATAGTGTGGCGTGTTTTCTGA
CTAGGGGAGGATGTTATGTGCATTGGGAGAGGGGGGCGGAGGTGTTTGAG
GAGTGGTTGATTGATCGTATGTATATCTATCTCATTCTGTGGAATTATGA
AGGTGATGATGCTAATAGGAGCGTAACAGATGAAACAGCTTCTAATGTCG
GGAACTGGATGTGGTTATCCTGCACGGCGTTCTTCACACAGTATAATAGA
TGCTATTCGCCGGTGGCATTTGGGAAGAAGTGGGATCCAGAAGGGCGGTT
CGTAAGACACTATATTCCGGAGCTGGAACACTATGATAAGAAGTATATCT
ATGAGCCGTGGAAGGCGCCGTTAGAAGATCAGAAGCGGTGGAAGTGTCGG
GTAGCTGGGGATGGGATGGTCGAGAAGGATGAAGAGACTGGGTTAAGAGC
TTACCCGGAGCCGATGTTCGACTTTGATGAGAGGAGACAGACGTGTATTG
CGCAGATGAAGGAGGCATATGAGGTGCATTTAATGGGGAATGATGAGAAG
GTCATGGATTGGTCGTGGAAGAAGATATTTGAGTACGAGGTTAAGGATGG
GAGGGTAGTGGATGAGACGAATGTGAAGGTGGATGGGGACGGTGGTCATC
GTAAAGGAGAGAAACGGGGGCGACAAGCAGGAGATCAGGATGGTGAAGAT
GAAGATGGAGGACATGGTTTGAAGAAGAAGAAATAG back to topCoding sequence (CDS) from alignment at ch5:2952914..2954899- >KJC3_007617-T1 ID=KJC3_007617-T1|Name=KJC3_007617-T1|organism=Aspergillus niger KJC3|type=CDS|length=3846bp|location=Sequence derived from alignment at ch5:2952914..2954899- (Aspergillus niger KJC3)
ATGAAACAGCTTCTAATGTCGGGAACTGGATGTGGTTATCCTGCACGGCG
TTCTTCACACAGTATAATAGATGCTATTCGCCGGTGGCATTTGGGAAGAA
GTGGGATCCAGAAGGGCGGTTCGTAAGACACTATATTCCGGAGCTGGAAC
ACTATGATAAGAAGTATATCTATGAGCCGTGGAAGGCGCCGTTAGAAGAT
CAGAAGCGGTGGAAGTGTCGGGTAGCTGGGGATGGGATGGTCGAGAAGGA
TGAAGAGACTGGGTTAAGAGCTTACCCGGAGCCGATGTTCGACTTTGATG
AGAGGAGACAGACGTGTATTGCGCAGATGAAGGAGGCATATGAGGTGCAT
TTAATGGGGAATGATGAGAAGGTCATGGATTGGTCGTGGAAGAAGATATT
TGAGTACGAGGTTAAGGATGGGAGGGTAGTGGATGAGACGAATGTGAAGG
TGGATGGGGACGGTGGTCATCGTAAAGGAGAGAAACGGGGGCGACAAGCA
GGAGATCAGGATGGTGAAGATGAAGATGGAGGACATGGTTTGAAGAAGAA
GAAATAGATGCCCCCCCAATCCGCACCCACCGTCGTATTCTGGCACCGCA
CCGACCTCCGCCTGCACGATAACCCAGCCCTGCAGGCTGCCCTCTCGCTC
AAGCCATCGACCTTCATCCCGATCTTCACCTGGGACCCGCACTATGCGTA
TCGGGTCCGCGTAGGCCCCAATCGCTGGCGCTTCCTGCTGGAATGCCAGA
AAGATCTCTCACAATCCTACAGCAAGCTGAACCCAAAGCAGAAGCTGTGG
GTGGTTCGCGAAGCACCTCAAACCGTTTTCCCCAAGTTATTCAAAGCATG
GGGTGCGACGCATCTTGTGTTCGAGAGTGACACGGATGGGTATGCGCGGG
AGCGCGATGAGACAGTTACGAAGTTGGCGAAGGAGGCAGGGGTAGAGGTT
ATAGTGAAGTCTGGACGGACATTGTTCGATTCCGACGAGGTGGTGAAACA
TAACAAGGGCGAGCCGACAATGAGTATTCATCAGGTGGAGAAGGCGATTG
AGCAGATAAACAATGGGGTGCCGGATAGGCCTGTTGACGCGCCGGAGAGG
ATACCTGATCCGTTGGGGGAGGAGAAGATGAGGGATATAAGTGGGCTTGA
GCATGAGGTTCCAGATCAGGAGGATGATATAAATGCTGCACATCGAACCA
AGCATAACGACAATCAGTACAAGAACATAGCAGGTCCCAAGGACGACTTC
TCCGTTCCCACGCTGGACGAACTCTCCATCGATCCCAGCCAAGCAACAAG
CCCCCATCACGGCGGCGAATCCATCGCGCTGGAGATGCTGACCACCTACC
TGCAACAAAACGAAGACTTCATCGCCACATTCGAAAAGCCCAAGACTTCC
CCCGCGGCCTTCCACCCACAAGCTACGACCCTCCTCTCGCCGCATCTGCA
CTTCGGCTCTCTCTCCGTGCGCAAATTCTGGCATGACGTGCAGGATACCC
TCCAGCAGCACGAATCAGCCCACAAGCCTACCTCAGACCTCCCTACTAAC
CTCCCTGGACAACTCCTCTTCCGGGAAATGTTCTTCGCTGCGCAAGCAGC
TCTAGGACCAGTGTATGCGCAGACGCGTGGGAACAAGATCGTGCGGTTCG
TTCCGTGGCATTTACAATCTAATCATGATAAGGAGACGGGATTAGTTGAT
AGGACGTATACGGTTGACGATGAGCAAGCGGAGGTGTGGTTCCGACGGTG
GAAGGAAGGGCGGACAGGATTTCCGTGGATCGATGCGTTGATGAGACAGC
TGAAGAATGAGGGATGGATTCATCATCTGGGGAGACATAGTGTGGCGTGT
TTTCTGACTAGGGGAGGATGTTATGTGCATTGGGAGAGGGGGGCGGAGGT
GTTTGAGGAGTGGTTGATTGATCATGAAACAGCTTCTAATGTCGGGAACT
GGATGTGGTTATCCTGCACGGCGTTCTTCACACAGTATAATAGATGCTAT
TCGCCGGTGGCATTTGGGAAGAAGTGGGATCCAGAAGGGCGGTTCGTAAG
ACACTATATTCCGGAGCTGGAACACTATGATAAGAAGTATATCTATGAGC
CGTGGAAGGCGCCGTTAGAAGATCAGAAGCGGTGGAAGTGTCGGGTAGCT
GGGGATGGGATGGTCGAGAAGGATGAAGAGACTGGGTTAAGAGCTTACCC
GGAGCCGATGTTCGACTTTGATGAGAGGAGACAGACGTGTATTGCGCAGA
TGAAGGAGGCATATGAGGTGCATTTAATGGGGAATGATGAGAAGGTCATG
GATTGGTCGTGGAAGAAGATATTTGAGTACGAGGTTAAGGATGGGAGGGT
AGTGGATGAGACGAATGTGAAGGTGGATGGGGACGGTGGTCATCGTAAAG
GAGAGAAACGGGGGCGACAAGCAGGAGATCAGGATGGTGAAGATGAAGAT
GGAGGACATGGTTTGAAGAAGAAGAAATAGATGCCCCCCCAATCCGCACC
CACCGTCGTATTCTGGCACCGCACCGACCTCCGCCTGCACGATAACCCAG
CCCTGCAGGCTGCCCTCTCGCTCAAGCCATCGACCTTCATCCCGATCTTC
ACCTGGGACCCGCACTATGCGTATCGGGTCCGCGTAGGCCCCAATCGCTG
GCGCTTCCTGCTGGAATGCCAGAAAGATCTCTCACAATCCTACAGCAAGC
TGAACCCAAAGCAGAAGCTGTGGGTGGTTCGCGAAGCACCTCAAACCGTT
TTCCCCAAGTTATTCAAAGCATGGGGTGCGACGCATCTTGTGTTCGAGAG
TGACACGGATGGGTATGCGCGGGAGCGCGATGAGACAGTTACGAAGTTGG
CGAAGGAGGCAGGGGTAGAGGTTATAGTGAAGTCTGGACGGACATTGTTC
GATTCCGACGAGGTGGTGAAACATAACAAGGGCGAGCCGACAATGAGTAT
TCATCAGGTGGAGAAGGCGATTGAGCAGATAAACAATGGGGTGCCGGATA
GGCCTGTTGACGCGCCGGAGAGGATACCTGATCCGTTGGGGGAGGAGAAG
ATGAGGGATATAAGTGGGCTTGAGCATGAGGTTCCAGATCAGGAGGATGA
TATAAATGCTGCACATCGAACCAAGCATAACGACAATCAGTACAAGAACA
TAGCAGGTCCCAAGGACGACTTCTCCGTTCCCACGCTGGACGAACTCTCC
ATCGATCCCAGCCAAGCAACAAGCCCCCATCACGGCGGCGAATCCATCGC
GCTGGAGATGCTGACCACCTACCTGCAACAAAACGAAGACTTCATCGCCA
CATTCGAAAAGCCCAAGACTTCCCCCGCGGCCTTCCACCCACAAGCTACG
ACCCTCCTCTCGCCGCATCTGCACTTCGGCTCTCTCTCCGTGCGCAAATT
CTGGCATGACGTGCAGGATACCCTCCAGCAGCACGAATCAGCCCACAAGC
CTACCTCAGACCTCCCTACTAACCTCCCTGGACAACTCCTCTTCCGGGAA
ATGTTCTTCGCTGCGCAAGCAGCTCTAGGACCAGTGTATGCGCAGACGCG
TGGGAACAAGATCGTGCGGTTCGTTCCGTGGCATTTACAATCTAATCATG
ATAAGGAGACGGGATTAGTTGATAGGACGTATACGGTTGACGATGAGCAA
GCGGAGGTGTGGTTCCGACGGTGGAAGGAAGGGCGGACAGGATTTCCGTG
GATCGATGCGTTGATGAGACAGCTGAAGAATGAGGGATGGATTCATCATC
TGGGGAGACATAGTGTGGCGTGTTTTCTGACTAGGGGAGGATGTTATGTG
CATTGGGAGAGGGGGGCGGAGGTGTTTGAGGAGTGGTTGATTGATC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036155 |
| DBxref | InterPro:IPR036134 |
| DBxref | InterPro:IPR005101 |
| DBxref | InterPro:IPR014729 |
| DBxref | InterPro:IPR006050 |
| DBxref | PFAM:PF03441 |
| DBxref | PFAM:PF00875 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2952914..2954899 - |
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