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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2956514..2958441+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007619-T1 ID=KJC3_007619-T1|Name=KJC3_007619-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1928bp|location=Sequence derived from alignment at ch5:2956514..2958441+ (Aspergillus niger KJC3)
GGTGTGTTTACCAATTCCCCCAAACATCTCATATCGCTTGGAACTATGGG
AGGGGAAGCAATTGTCGGACCCGCCCTTTCAGGCCAGTTCTATGCTGGAA
CCGGAAAGCAGTACAACTTCGGCAGCGTATCGGGAGAGAAGATCTACATG
GGTACTGGTGGGTACATTGCGACTCCACCTACCAGAACAGTGGGCTGAGA
CCAGACAGGAGATGTCCAGGTGTTCTCGACATTACCCTTTGCGAAAAGCG
CTTGCTTCAACTCCCGGGAAAGGGAGCATGACTCGTTCTGCCTGGAGGGC
ACTCGCGTGGATTTATTGAAGGACATAGCAGAATGGATTGATGCGGACCA
TGACGAGGGTATCTTTTGGCTGAGTGGAATGGCAGGGACTGGAAAGACCA
CAGTTGCTCGCACAGTGGCTCGAAACTACGATCAGCAGTCGCGGCTGGCT
GCGAGCTTTTTCTTTACAGACGAGAATGGCGATGCTAATAGTGCGGACAT
CTTTGCATCAACCGTTGCTTGTCAGCTGGCCAGCTTCAATACAAGCATGA
AAAATGCTATTCAGGATGTGTTGGAACGATGCCCACTTTTACCCTATCAA
GGGTTGTCAGAACAGTGGACACGACTTGTGAAAGAGCCACTTGCGGCATT
CACAAAGAAGCCGAATCAGAATCCATTACTGATTGTGGTCGATGGCTTGG
ACTTGTGTCCTGAGAAGAATGATCAACGCTTGATTCTTCGTCTTCTATCC
AGTATCACTCACGATTGCGAAAATAAGGTGATCGTGTTTCTGGCGAGTAG
ACCAGAGTCCGCCATTCGGTCAGAGCTTTCCGGAATACGTCATAAGACGT
TAAGATTACAGGATATTAATCGCAGAATCGTTGACTCGGATATAAAATTG
TTATTGAACCATGAAATTGGCAAAATTATGGCTCCCTTCGAACCGTTCGA
AACAAAGTCTCTATGGGGCTCAGGGATCATTCCGACTTTCGTCATTTTTG
CTCGTGGCCTCTTCCTTTGGGCTGCCACTGCTTGTCAATACATCCGAAAT
GCTAAAACCCCCCAAATTGTCTTGCAGAGACTGAGAAATATAGATGCAGA
ACGGCCGGAAAAGGGAACACCAATTGAAGTGCTGTACAAAATGTATACTA
GCATCTTGGATGACTCCGTCAATGATGCCTGGGATGAACATGAAAAAGCC
ACCTACTGGAACTCCACTCGACGAATATTATGCGCTATTACTTACAACCG
TGGCATGTTATCGAAGCCTGCTTTGGCAAACTTGATACAAATGGATGACA
TTGACTCCATGTTGGAAGACTTGCATTCTATTATCAGAATACCTGAGGAT
AATAACAAACAAATTGGCTTCCTTCATATCTCCCTGCACAAGTTTGTCAC
CACCATGGAGCATCCAAGCCTTTATTTAACGCCACAACAGAGCCATTCTA
TGCTGGCGGATACTTGCCTTGACCTCCTCAATGAAGCATGTGGGCAAGAT
AGTGGCAAGCTACAGAATGGAGCAGAGCCGAAGACACAGAAAGTGTCCCA
AGCGCTGCAGTATGCGTGCACCAAGTGGGTAGATCATCTTTGCGATGGAG
AGGAATCGCTGCCACGAAACAGTAAAGCATTCGTGTTTTTAAAAACACAT
GGTAAGAGTTGGACTAAACTACTAATCTTAAGTGGCCAGGGATTTTTGGT
GGAACGCCTGGGAGATAGACTTGTGGAAATGATTGTGAGTGACACTTCGA
GCGCAGAACCTAAGCCACCAGGTTATCTTGCTAATCCTGGATAGGAGAAA
GATCGAGAAGACGACAAGCGGTTCGTTGATGAGTTACTCACTGCTGACTC
CAATCCCGAGATATCCGCGCAGGATCAATAACATAGTTAGTTTGAAGCAC
CATGTAGATACATTCGATTCAGTACAGC back to topCoding sequence (CDS) from alignment at ch5:2956514..2958441+ >KJC3_007619-T1 ID=KJC3_007619-T1|Name=KJC3_007619-T1|organism=Aspergillus niger KJC3|type=CDS|length=5175bp|location=Sequence derived from alignment at ch5:2956514..2958441+ (Aspergillus niger KJC3)
ATGGGAGGGGAAGCAATTGTCGGACCCGCCCTTTCAGGCCAGTTCTATGC
TGGAACCGGAAAGCAGTACAACTTCGGCAGCGTATCGGGAGAGAAGATCT
ACATGGGTACTGGAGATGTCCAGGTGTTCTCGACATTACCCTTTGCGAAA
AGCGCTTGCTTCAACTCCCGGGAAAGGGAGCATGACTCGTTCTGCCTGGA
GGGCACTCGCGTGGATTTATTGAAGGACATAGCAGAATGGATTGATGCGG
ACCATGACGAGGGTATCTTTTGGCTGAGTGGAATGGCAGGGACTGGAAAG
ACCACAGTTGCTCGCACAGTGGCTCGAAACTACGATCAGCAGTCGCGGCT
GGCTGCGAGCTTTTTCTTTACAGACGAGAATGGCGATGCTAATAGTGCGG
ACATCTTTGCATCAACCGTTGCTTGTCAGCTGGCCAGCTTCAATACAAGC
ATGAAAAATGCTATTCAGGATGTGTTGGAACGATGCCCACTTTTACCCTA
TCAAGGGTTGTCAGAACAGTGGACACGACTTGTGAAAGAGCCACTTGCGG
CATTCACAAAGAAGCCGAATCAGAATCCATTACTGATTGTGGTCGATGGC
TTGGACTTGTGTCCTGAGAAGAATGATCAACGCTTGATTCTTCGTCTTCT
ATCCAGTATCACTCACGATTGCGAAAATAAGGTGATCGTGTTTCTGGCGA
GTAGACCAGAGTCCGCCATTCGGTCAGAGCTTTCCGGAATACGTCATAAG
ACGTTAAGATTACAGGATATTAATCGCAGAATCGTTGACTCGGATATAAA
ATTGTTATTGAACCATGAAATTGGCAAAATTATGGCTCCCTTCGAACCGT
TCGAAACAAAGTCTCTATGGGGCTCAGGGATCATTCCGACTTTCGTCATT
TTTGCTCGTGGCCTCTTCCTTTGGGCTGCCACTGCTTGTCAATACATCCG
AAATGCTAAAACCCCCCAAATTGTCTTGCAGAGACTGAGAAATATAGATG
CAGAACGGCCGGAAAAGGGAACACCAATTGAAGTGCTGTACAAAATGTAT
ACTAGCATCTTGGATGACTCCGTCAATGATGCCTGGGATGAACATGAAAA
AGCCACCTACTGGAACTCCACTCGACGAATATTATGCGCTATTACTTACA
ACCGTGGCATGTTATCGAAGCCTGCTTTGGCAAACTTGATACAAATGGAT
GACATTGACTCCATGTTGGAAGACTTGCATTCTATTATCAGAATACCTGA
GGATAATAACAAACAAATTGGCTTCCTTCATATCTCCCTGCACAAGTTTG
TCACCACCATGGAGCATCCAAGCCTTTATTTAACGCCACAACAGAGCCAT
TCTATGCTGGCGGATACTTGCCTTGACCTCCTCAATGAAGCATGTGGGCA
AGATAGTGGCAAGCTACAGAATGGAGCAGAGCCGAAGACACAGAAAGTGT
CCCAAGCGCTGCAGTATGCGTGCACCAAGTGGGTAGATCATCTTTGCGAT
GGAGAGGAATCGCTGCCACGAAACAGTAAAGCATTCGTGTTTTTAAAAAC
ACATGGTAAGAGTTGGACTAAACTACTAATCTTAAGTGGCCAGGGATTTT
TGGTGGAACGCCTGGGAGATAGACTTGTGGAAATGATTGAGAAAGATCGA
GAAGACGACAAGCGGTTCGTTGATGAGTTACTCACTGCTGACTCCAATCC
CGAGATATCCGCGCAGGATCAATAAATGGGAGGGGAAGCAATTGTCGGAC
CCGCCCTTTCAGGCCAGTTCTATGCTGGAACCGGAAAGCAGTACAACTTC
GGCAGCGTATCGGGAGAGAAGATCTACATGGGTACTGGAGATGTCCAGGT
GTTCTCGACATTACCCTTTGCGAAAAGCGCTTGCTTCAACTCCCGGGAAA
GGGAGCATGACTCGTTCTGCCTGGAGGGCACTCGCGTGGATTTATTGAAG
GACATAGCAGAATGGATTGATGCGGACCATGACGAGGGTATCTTTTGGCT
GAGTGGAATGGCAGGGACTGGAAAGACCACAGTTGCTCGCACAGTGGCTC
GAAACTACGATCAGCAGTCGCGGCTGGCTGCGAGCTTTTTCTTTACAGAC
GAGAATGGCGATGCTAATAGTGCGGACATCTTTGCATCAACCGTTGCTTG
TCAGCTGGCCAGCTTCAATACAAGCATGAAAAATGCTATTCAGGATGTGT
TGGAACGATGCCCACTTTTACCCTATCAAGGGTTGTCAGAACAGTGGACA
CGACTTGTGAAAGAGCCACTTGCGGCATTCACAAAGAAGCCGAATCAGAA
TCCATTACTGATTGTGGTCGATGGCTTGGACTTGTGTCCTGAGAAGAATG
ATCAACGCTTGATTCTTCGTCTTCTATCCAGTATCACTCACGATTGCGAA
AATAAGGTGATCGTGTTTCTGGCGAGTAGACCAGAGTCCGCCATTCGGTC
AGAGCTTTCCGGAATACGTCATAAGACGTTAAGATTACAGGATATTAATC
GCAGAATCGTTGACTCGGATATAAAATTGTTATTGAACCATGAAATTGGC
AAAATTATGGCTCCCTTCGAACCGTTCGAAACAAAGTCTCTATGGGGCTC
AGGGATCATTCCGACTTTCGTCATTTTTGCTCGTGGCCTCTTCCTTTGGG
CTGCCACTGCTTGTCAATACATCCGAAATGCTAAAACCCCCCAAATTGTC
TTGCAGAGACTGAGAAATATAGATGCAGAACGGCCGGAAAAGGGAACACC
AATTGAAGTGCTGTACAAAATGTATACTAGCATCTTGGATGACTCCGTCA
ATGATGCCTGGGATGAACATGAAAAAGCCACCTACTGGAACTCCACTCGA
CGAATATTATGCGCTATTACTTACAACCGTGGCATGTTATCGAAGCCTGC
TTTGGCAAACTTGATACAAATGGATGACATTGACTCCATGTTGGAAGACT
TGCATTCTATTATCAGAATACCTGAGGATAATAACAAACAAATTGGCTTC
CTTCATATCTCCCTGCACAAGTTTGTCACCACCATGGAGCATCCAAGCCT
TTATTTAACGCCACAACAGAGCCATTCTATGCTGGCGGATACTTGCCTTG
ACCTCCTCAATGAAGCATGTGGGCAAGATAGTGGCAAGCTACAGAATGGA
GCAGAGCCGAAGACACAGAAAGTGTCCCAAGCGCTGCAGTATGCGTGCAC
CAAGTGGGTAGATCATCTTTGCGATGGAGAGGAATCGCTGCCACGAAACA
GTAAAGCATTCGTGTTTTTAAAAACACATGGTAAGAGTTGGACTAAACTA
CTAATCTTAAGTGGCCAGGGATTTTTGGTGGAACGCCTGGGAGATAGACT
TGTGGAAATGATTGAGAAAGATCGAGAAGACGACAAGCGGTTCGTTGATG
AGTTACTCACTGCTGACTCCAATCCCGAGATATCCGCGCAGGATCAATAA
ATGGGAGGGGAAGCAATTGTCGGACCCGCCCTTTCAGGCCAGTTCTATGC
TGGAACCGGAAAGCAGTACAACTTCGGCAGCGTATCGGGAGAGAAGATCT
ACATGGGTACTGGAGATGTCCAGGTGTTCTCGACATTACCCTTTGCGAAA
AGCGCTTGCTTCAACTCCCGGGAAAGGGAGCATGACTCGTTCTGCCTGGA
GGGCACTCGCGTGGATTTATTGAAGGACATAGCAGAATGGATTGATGCGG
ACCATGACGAGGGTATCTTTTGGCTGAGTGGAATGGCAGGGACTGGAAAG
ACCACAGTTGCTCGCACAGTGGCTCGAAACTACGATCAGCAGTCGCGGCT
GGCTGCGAGCTTTTTCTTTACAGACGAGAATGGCGATGCTAATAGTGCGG
ACATCTTTGCATCAACCGTTGCTTGTCAGCTGGCCAGCTTCAATACAAGC
ATGAAAAATGCTATTCAGGATGTGTTGGAACGATGCCCACTTTTACCCTA
TCAAGGGTTGTCAGAACAGTGGACACGACTTGTGAAAGAGCCACTTGCGG
CATTCACAAAGAAGCCGAATCAGAATCCATTACTGATTGTGGTCGATGGC
TTGGACTTGTGTCCTGAGAAGAATGATCAACGCTTGATTCTTCGTCTTCT
ATCCAGTATCACTCACGATTGCGAAAATAAGGTGATCGTGTTTCTGGCGA
GTAGACCAGAGTCCGCCATTCGGTCAGAGCTTTCCGGAATACGTCATAAG
ACGTTAAGATTACAGGATATTAATCGCAGAATCGTTGACTCGGATATAAA
ATTGTTATTGAACCATGAAATTGGCAAAATTATGGCTCCCTTCGAACCGT
TCGAAACAAAGTCTCTATGGGGCTCAGGGATCATTCCGACTTTCGTCATT
TTTGCTCGTGGCCTCTTCCTTTGGGCTGCCACTGCTTGTCAATACATCCG
AAATGCTAAAACCCCCCAAATTGTCTTGCAGAGACTGAGAAATATAGATG
CAGAACGGCCGGAAAAGGGAACACCAATTGAAGTGCTGTACAAAATGTAT
ACTAGCATCTTGGATGACTCCGTCAATGATGCCTGGGATGAACATGAAAA
AGCCACCTACTGGAACTCCACTCGACGAATATTATGCGCTATTACTTACA
ACCGTGGCATGTTATCGAAGCCTGCTTTGGCAAACTTGATACAAATGGAT
GACATTGACTCCATGTTGGAAGACTTGCATTCTATTATCAGAATACCTGA
GGATAATAACAAACAAATTGGCTTCCTTCATATCTCCCTGCACAAGTTTG
TCACCACCATGGAGCATCCAAGCCTTTATTTAACGCCACAACAGAGCCAT
TCTATGCTGGCGGATACTTGCCTTGACCTCCTCAATGAAGCATGTGGGCA
AGATAGTGGCAAGCTACAGAATGGAGCAGAGCCGAAGACACAGAAAGTGT
CCCAAGCGCTGCAGTATGCGTGCACCAAGTGGGTAGATCATCTTTGCGAT
GGAGAGGAATCGCTGCCACGAAACAGTAAAGCATTCGTGTTTTTAAAAAC
ACATGGTAAGAGTTGGACTAAACTACTAATCTTAAGTGGCCAGGGATTTT
TGGTGGAACGCCTGGGAGATAGACTTGTGGAAATGATTGAGAAAGATCGA
GAAGACGACAAGCGGTTCGTTGATGAGTTACTCACTGCTGACTCCAATCC
CGAGATATCCGCGCAGGATCAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007619-T1.utr5p1 | KJC3_007619-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007619-T1.utr3p1 | KJC3_007619-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR041664 |
| DBxref | PFAM:PF05729 |
| DBxref | PFAM:PF13191 |
| DBxref | PFAM:PF00004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2956514..2958441 + |
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