|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2969129..2972202- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007623-T2 ID=KJC3_007623-T2|Name=KJC3_007623-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3074bp|location=Sequence derived from alignment at ch5:2969129..2972202- (Aspergillus niger KJC3)
GTCGCAATCCTTCCCAGAGTTGATGCCTCAATGCCTTAATCCTTCGTGCC
TTTTTGCCTTTTAATATGTTGATGCCTTGTAGCCATGTAGCCTTATGGCC
TTGTCGCCTGAGCTCCCCGCACGTGGCGGGCCCAGCCGCAGGTTCCTTTG
CGGCTTCGTTCTTCCCCGCACATTCTGGTCTTCCACCGGCAAACATAATC
ACTTTCTCTCCACTACCCCGGATCCTGTCTATCGCAGCCCAGAAATCTCC
ATCCGTTGCTTTCCCCCTCGCTCGTGACGTATTCTGCAGCCCCTAGTCCA
CTTGCTACATGCAGAAAGCCTCCAGGAGGTCGACTCCCCGGTCGCGAATA
TCCAAGGCTTGCGACCGTTGTCGTCGACAGAAGCTCAAGGTAGACTCCGA
CATTGGGGATAAGCTGGGAATAACCAACCGTGCACTATACTAATTGATTT
CAGTGTGACTCAGTTCGTCCATGTGTTCTATGCACCCGTGCTGGCCACAT
ATGCGAGACAACTACAGTATCACGTCGTCGTGTTTCCGAATACCAAACAC
CGGCCACTCCAGCGGCTTCCGCCGGATCTGAGACGCCGCAGGTCTTACCG
CGCAGAGCGTCCGAGGACCACCAACAATATGCAACGGGCACTTCAGCGAT
TGGTTTTGCCAGACAAGTTTATAATGAAGAGGAGACAGGCCGGACCTTGA
CTGAAGCTGCTGTGCCGGGTGATGTTGGCATGGCGGGTACTGATAATTCC
CTCTGGGGCCTCAAGGAGACATCCATGCCACCAAGGACTGTGATGCTAGC
ATTGATCAATGCCTACTTTGACCGAATGCAGTGGTTTATCTTGGTACTCC
ACGAGCCCTCATTCCGAGAAATGGCCCAGCCAATCATCTCTCAGCATGAA
TGGCAACGCCAGGATCTTGGTGCAGTCATGACTGTGCTTGCCGTCGCTGT
CATAAGCTTACAATCTGTCCTGCCAGACGCAGATTGGCCTGGTCATATCC
TCCTGGCTAGGCATTCGATTGATGCCCAGGATTTGCTGAACAAATTTCTG
GCCGAGATTCGTGCCCGTGTGCTTGACATGTTGGAGGACCGCCGTATCGA
AGGAGTCCAAGTCTGTCTCTTACTCTGTTGCTATTACATGTTCCACAGCT
CCCCAAACATGGCGTGGACCACGTGTGGTATGGCTTTCAGAGCTGCATAT
GCTCTGAACCTTCAAGAAACCAGTACATTGTCACAAACTTCTGTCGCTAA
TGAGACACGCTCTCGTTGTTGGAACCAGATCATCATCTCGGATACATTCT
GTTCCATTCTCTATGGACGTCCCGCTTCTCTGCCTTCTGCCAATGTTCGT
CACCTACAGCTCGTCGACGACCTGGCCATTGATCACTCGTTGTTAAACGA
TCTCTCGGTGGACAATAGCGACGGACTAACGTCGCGCGCCCCATTTCACG
TCTTGAAGACAGATGTGTATGCGATTGCTCGCGAAATTCTTATTCGATTC
CGTCGGCTTGACCTGACATCTGGAATAGACGAACAGGACTTGGAAGCTAT
CATTCGTATTACCGAAGAGTCCAACGCACTTCTCACTGACTGGTGGAAGT
CCGTCCCGAAACTGTATGACTTCGATTACTGGAAAGCAGACGGTCGATGG
GAAATGGTTGAAGGCCAGCTGCAAAGGCTTCCCTCCGAAGCAAGGCAACA
GGTGGAGACAATATATCTACAGGCTGCTGTTCTCCAGTTGACGTACGACG
GCATGGTCATCCAAGCAAATAGACCACTGTTGGAGCGAAGAATCAACAGG
CTAACATCTTCGCGGGCGATCATGGATGCGATGCATAGGGCGCTTGACCG
AGCCACGGCTGCTGCTCTCCGCATATCCCGTGTTCCAGTTCACAAGCTGA
AAAATCATTTTGCTATAGCAGTCGTATCGATGCAAGAGTTCACTGCTGGT
GTGATTCTCTGTATACCTCCCACGGTGAAGCCTTTAACGGCCACCGCTCA
TGAGGCGAAGGACGGGGTGGTAAGAATAATACGCGCCAGTCGAAGTCTCA
AGAGCCACGATCGAATAGCAAGGCAAACTGAACAACTTCTGACGGAGCTA
CTGAAAGTTACCACCCAACGCGAGATAACGCACGCCTTGGCCGATAATCT
CGACACCAATTTCCCCTCCGATACGCGGCTAACAGGCTCCGCTGTTGCCG
GCGCCTCAAATGACTCCTTAGGTGCAGGACGCTCCAGGCCAGTTCCCGGA
TCCGCAGCGCAGGCAGTTGTAGATCCTATCCAAGGAGCCTGGGACTCAGA
ATTTAATGCCCTCCCTGCCGTAACGGGACCTTATGATTTCCTCCCTGCTC
AAGCCTTTCAACAGCTGGACGATACATTTGGTGCCTTTGGAGAATGTAAT
GTCCCTTGATCACCCCAGACTCACATCCAGATTCTGACTGACCTCGTGCA
TAGCCATATTTAACTTGGTCCCTGATGATCAAAACAGTACATGGAACTGG
GGCCGAACATTTCCCTAGCCAAAGGAGCATCAAGGAGTTAACGTGATCAG
TACAGCCTTGTAGCTCGCTGTAACTGCCCTGGAGCCAAGCCAAAGCCTAG
ACCGCAAGGTGCATGGGCGAGCTTTGCGAGGATTTAGTTGTTATTTAGTA
TGCCAAGATTGAGCCACGCAGAATGGCTTATGGCCATAGTAGCAACAATG
GCCACGGAAAGTTCTTCCATGTGGTATGGGGAAAGCCGCCGGATATTTGG
GGAGGGCGTGATTGTTCCGGTGGCTATCTTCCCGGTGGAGATAACGGCGG
TGACCATCAAAACTCCTCAGCCCGGATGGCTCGGACTCCGCATCGTCAAT
TATCGGTTTCGTGACAACCATTCAACTACTTAGCAGACACAAATAGCAAT
CCCACTTACCCCGACCTTTAATAATAATTTTTAGCGGATCTATCGATCTC
AGAGACAATATTGCCATCGTTCTGTGTGGAAGGCCAGCGCCATGGTTTCA
CAATAATAATCCTCAAAATTGCCCAAAAGCTAAAGCGAAGGAAAGTCGAG
AAGCCCAGTCTAGACTGGCAGGCT back to topCoding sequence (CDS) from alignment at ch5:2969129..2972202- >KJC3_007623-T2 ID=KJC3_007623-T2|Name=KJC3_007623-T2|organism=Aspergillus niger KJC3|type=CDS|length=3462bp|location=Sequence derived from alignment at ch5:2969129..2972202- (Aspergillus niger KJC3)
CCATATTTAACTTGGTCCCTGATGATCAAAACAGTACATGGAACTGGGGC
CGAACATTTCCCTAGATGGCGGGTACTGATAATTCCCTCTGGGGCCTCAA
GGAGACATCCATGCCACCAAGGACTGTGATGCTAGCATTGATCAATGCCT
ACTTTGACCGAATGCAGTGGTTTATCTTGGTACTCCACGAGCCCTCATTC
CGAGAAATGGCCCAGCCAATCATCTCTCAGCATGAATGGCAACGCCAGGA
TCTTGGTGCAGTCATGACTGTGCTTGCCGTCGCTGTCATAAGCTTACAAT
CTGTCCTGCCAGACGCAGATTGGCCTGGTCATATCCTCCTGGCTAGGCAT
TCGATTGATGCCCAGGATTTGCTGAACAAATTTCTGGCCGAGATTCGTGC
CCGTGTGCTTGACATGTTGGAGGACCGCCGTATCGAAGGAGTCCAAGTCT
GTCTCTTACTCTGTTGCTATTACATGTTCCACAGCTCCCCAAACATGGCG
TGGACCACGTGTGGTATGGCTTTCAGAGCTGCATATGCTCTGAACCTTCA
AGAAACCAGTACATTGTCACAAACTTCTGTCGCTAATGAGACACGCTCTC
GTTGTTGGAACCAGATCATCATCTCGGATACATTCTGTTCCATTCTCTAT
GGACGTCCCGCTTCTCTGCCTTCTGCCAATGTTCGTCACCTACAGCTCGT
CGACGACCTGGCCATTGATCACTCGTTGTTAAACGATCTCTCGGTGGACA
ATAGCGACGGACTAACGTCGCGCGCCCCATTTCACGTCTTGAAGACAGAT
GTGTATGCGATTGCTCGCGAAATTCTTATTCGATTCCGTCGGCTTGACCT
GACATCTGGAATAGACGAACAGGACTTGGAAGCTATCATTCGTATTACCG
AAGAGTCCAACGCACTTCTCACTGACTGGTGGAAGTCCGTCCCGAAACTG
TATGACTTCGATTACTGGAAAGCAGACGGTCGATGGGAAATGGTTGAAGG
CCAGCTGCAAAGGCTTCCCTCCGAAGCAAGGCAACAGGTGGAGACAATAT
ATCTACAGGCTGCTGTTCTCCAGTTGACGTACGACGGCATGGTCATCCAA
GCAAATAGACCACTGTTGGAGCGAAGAATCAACAGGCTAACATCTTCGCG
GGCGATCATGGATGCGATGCATAGGGCGCTTGACCGAGCCACGGCTGCTG
CTCTCCGCATATCCCGTGTTCCAGTTCACAAGCTGAAAAATCATTTTGCT
ATAGCAGTCGTATCGATGCAAGAGTTCACTGCTGGTGTGATTCTCTGTAT
ACCTCCCACGGTGAAGCCTTTAACGGCCACCGCTCATGAGGCGAAGGACG
GGGTGGTAAGAATAATACGCGCCAGTCGAAGTCTCAAGAGCCACGATCGA
ATAGCAAGGCAAACTGAACAACTTCTGACGGAGCTACTGAAAGTTACCAC
CCAACGCGAGATAACGCACGCCTTGGCCGATAATCTCGACACCAATTTCC
CCTCCGATACGCGGCTAACAGGCTCCGCTGTTGCCGGCGCCTCAAATGAC
TCCTTAGGTGCAGGACGCTCCAGGCCAGTTCCCGGATCCGCAGCGCAGGC
AGTTGTAGATCCTATCCAAGGAGCCTGGGACTCAGAATTTAATGCCCTCC
CTGCCGTAACGGGACCTTATGATTTCCTCCCTGCTCAAGCCTTTCAACAG
CTGGACGATACATTTGGTGCCTTTGGAGAATCCATATTTAACTTGGTCCC
TGATGATCAAAACAGTACATGGAACTGGGGCCGAACATTTCCCTAGATGG
CGGGTACTGATAATTCCCTCTGGGGCCTCAAGGAGACATCCATGCCACCA
AGGACTGTGATGCTAGCATTGATCAATGCCTACTTTGACCGAATGCAGTG
GTTTATCTTGGTACTCCACGAGCCCTCATTCCGAGAAATGGCCCAGCCAA
TCATCTCTCAGCATGAATGGCAACGCCAGGATCTTGGTGCAGTCATGACT
GTGCTTGCCGTCGCTGTCATAAGCTTACAATCTGTCCTGCCAGACGCAGA
TTGGCCTGGTCATATCCTCCTGGCTAGGCATTCGATTGATGCCCAGGATT
TGCTGAACAAATTTCTGGCCGAGATTCGTGCCCGTGTGCTTGACATGTTG
GAGGACCGCCGTATCGAAGGAGTCCAAGTCTGTCTCTTACTCTGTTGCTA
TTACATGTTCCACAGCTCCCCAAACATGGCGTGGACCACGTGTGGTATGG
CTTTCAGAGCTGCATATGCTCTGAACCTTCAAGAAACCAGTACATTGTCA
CAAACTTCTGTCGCTAATGAGACACGCTCTCGTTGTTGGAACCAGATCAT
CATCTCGGATACATTCTGTTCCATTCTCTATGGACGTCCCGCTTCTCTGC
CTTCTGCCAATGTTCGTCACCTACAGCTCGTCGACGACCTGGCCATTGAT
CACTCGTTGTTAAACGATCTCTCGGTGGACAATAGCGACGGACTAACGTC
GCGCGCCCCATTTCACGTCTTGAAGACAGATGTGTATGCGATTGCTCGCG
AAATTCTTATTCGATTCCGTCGGCTTGACCTGACATCTGGAATAGACGAA
CAGGACTTGGAAGCTATCATTCGTATTACCGAAGAGTCCAACGCACTTCT
CACTGACTGGTGGAAGTCCGTCCCGAAACTGTATGACTTCGATTACTGGA
AAGCAGACGGTCGATGGGAAATGGTTGAAGGCCAGCTGCAAAGGCTTCCC
TCCGAAGCAAGGCAACAGGTGGAGACAATATATCTACAGGCTGCTGTTCT
CCAGTTGACGTACGACGGCATGGTCATCCAAGCAAATAGACCACTGTTGG
AGCGAAGAATCAACAGGCTAACATCTTCGCGGGCGATCATGGATGCGATG
CATAGGGCGCTTGACCGAGCCACGGCTGCTGCTCTCCGCATATCCCGTGT
TCCAGTTCACAAGCTGAAAAATCATTTTGCTATAGCAGTCGTATCGATGC
AAGAGTTCACTGCTGGTGTGATTCTCTGTATACCTCCCACGGTGAAGCCT
TTAACGGCCACCGCTCATGAGGCGAAGGACGGGGTGGTAAGAATAATACG
CGCCAGTCGAAGTCTCAAGAGCCACGATCGAATAGCAAGGCAAACTGAAC
AACTTCTGACGGAGCTACTGAAAGTTACCACCCAACGCGAGATAACGCAC
GCCTTGGCCGATAATCTCGACACCAATTTCCCCTCCGATACGCGGCTAAC
AGGCTCCGCTGTTGCCGGCGCCTCAAATGACTCCTTAGGTGCAGGACGCT
CCAGGCCAGTTCCCGGATCCGCAGCGCAGGCAGTTGTAGATCCTATCCAA
GGAGCCTGGGACTCAGAATTTAATGCCCTCCCTGCCGTAACGGGACCTTA
TGATTTCCTCCCTGCTCAAGCCTTTCAACAGCTGGACGATACATTTGGTG
CCTTTGGAGAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007623-T2.utr3p1 | KJC3_007623-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007623-T2.utr5p1 | KJC3_007623-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2969129..2972202 - |
|
