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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2996367..2998268+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007637-T1 ID=KJC3_007637-T1|Name=KJC3_007637-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1902bp|location=Sequence derived from alignment at ch5:2996367..2998268+ (Aspergillus niger KJC3)
AGACTCTTGCGCGTACGCGGTCGCAATCCCTGTCACCAATAAAAACTTAT
TCACAGGCCCCGGCTCAAGGAATTAGTACCATGGAAAAGCCTACGGATGA
TTTACCTACTCCTTTGGACACCAAAGACCATGCGGCGTTTAAATCCTTCG
ACCTATCAAGTGACGGGCTACGGACAAAAGACGGCGTTGTCTTAGTTCCT
CAACCATCCCAAGATCCTGAAGACCCATTGGCATGTTGTTTCTTTCCGTA
CATCATCCATCCTGTGCCGTCTGAGTACTGACCGCTGCCTAGAATTGGGC
CAAAGGTCGGAAGTTGAGAAACCTGACTATCCTCTGTATGGCAGGGTTCG
CAGGGACCGCACTAGATCTGGCGAACCAACTTGCTATGAAGGACCAGGCG
AAAAATTGGGATAAGGAACTTATAGAGATTACTTACACCATCTCTGCCTC
GATCGCAGGTATTGCCTATGGGCCATTGCTGATTAATCCGGTGGCGCAAG
CATTTGGTCGCACTGCGATTATATTTTGGTGCCTGGTGTTTGCGATGGCC
TGTGCTATATGGTCAGCTTGCATGACAAGCAAAGGCGACTATGAGCGTTT
TGTTGCATCGCGTCTGTTTGACGGTATATTCGGATCAATCCCCTCCATCG
TTGGCGTGGGAGCCGTGTATGACATGTTTTTCTTGCATGAGCGTGGCAAG
GCATATGCCATCTTCCATGTCTCCTTCCTGTTTGGCACGGTTGCGGGTCC
AACCTTTGGGGGGTTCATCGTCCAACATACGAACTGGCCCTGGGTGTTCT
GGTGGATCGTGATCGCGCAGGGACTTGTTCTCATCCTTGGTAAGTGCAGA
GCCCGTAAAGTGATATGCAGCTTGGCATTGGTCTTATTCTATTTTAGCAT
TCTTTTTCTTGGAAGAGACCAGCTACCCTCGTGAGGGGAAGATGTTATCG
ATTGTCATGCCTAAGAGCTTCTGGGCAAAGCGAATGGCCACACTGCTTCC
TCATAAGACGGGGATTTCCCGCGCAGAACTGGTAGCCGTGATTTCCTCAC
CTCTATCAACCAATTCTGACTCAAGATGCAGGGTCGCATCGCTCGGCTAC
CCTTCCGGGTTGGTTTCTCGCCCGTTGGTCTGCTTATTGGCATCTTCCAA
CTAGCATCTTTTGGCTGGTTCGTCGCAACGCACAGCCTCTTGACTGTCTG
GCTGGAGAAACCTGTCTCCGTCGGCGGATGGGGATTTAGTCCTCAACGGA
ACGCCTTCTGTACGCCTTCACTCCCCTCCCCCTCCCCATATTCCTTATGC
CCATGGCTAACCAGCACGAAGTCATCTTCTCCCTCTGGGTTGGCCTTCTG
ACGGCCGAAATATGGGGCTACCTCTGTAACGACCGCATCGCTCTATGGAT
CTGCCGCACGCGCGAGAAGGGTGTATGGAAGCCTGAGTGTCGGCTACATG
CCCTCTGGGTCCCATCCCTCATTATTCTCCCCATCGGCCTCGGCATTGTC
GGATCTGCTCTGCAATACCATCTCCACTACATGGTCCTCGCCCTAGGTGC
CTACCTCATCACCTTCGCCTCGATGAGCTCTGTCCCAATCGCTGTAACTT
ACATGATCGAATGTGTCGCCTCGCAGCCCACCGAGATGGGTGCGTTTATG
GGCGCTTATCGTCTTACACTGGGGTTGGTCGTGCCGTTCTTCATCGATCA
GTGGGTGGCCCGGGTGGGCTTCGGTTGGGTATATGGGATGATGGCTTTCT
TTTCGATTTTTGCTTTTGGGTTCGTGGTTATGTTGATGCTGTTTGGTGAT
AGGTTAAGGGAGCGGACGTTGGCCAAATTGGCTCCTAGTGAAATAGGGGC
CAAGGTTATATATACCAGCGATGAGGAGGGACGTTAAAATAATACATCTG
GT back to topCoding sequence (CDS) from alignment at ch5:2996367..2998268+ >KJC3_007637-T1 ID=KJC3_007637-T1|Name=KJC3_007637-T1|organism=Aspergillus niger KJC3|type=CDS|length=7875bp|location=Sequence derived from alignment at ch5:2996367..2998268+ (Aspergillus niger KJC3)
ATGGAAAAGCCTACGGATGATTTACCTACTCCTTTGGACACCAAAGACCA
TGCGGCGTTTAAATCCTTCGACCTATCAAGTGACGGGCTACGGACAAAAG
ACGGCGTTGTCTTAGTTCCTCAACCATCCCAAGATCCTGAAGACCCATTG
AATTGGGCCAAAGGTCGGAAGTTGAGAAACCTGACTATCCTCTGTATGGC
AGGGTTCGCAGGGACCGCACTAGATCTGGCGAACCAACTTGCTATGAAGG
ACCAGGCGAAAAATTGGGATAAGGAACTTATAGAGATTACTTACACCATC
TCTGCCTCGATCGCAGGTATTGCCTATGGGCCATTGCTGATTAATCCGGT
GGCGCAAGCATTTGGTCGCACTGCGATTATATTTTGGTGCCTGGTGTTTG
CGATGGCCTGTGCTATATGGTCAGCTTGCATGACAAGCAAAGGCGACTAT
GAGCGTTTTGTTGCATCGCGTCTGTTTGACGGTATATTCGGATCAATCCC
CTCCATCGTTGGCGTGGGAGCCGTGTATGACATGTTTTTCTTGCATGAGC
GTGGCAAGGCATATGCCATCTTCCATGTCTCCTTCCTGTTTGGCACGGTT
GCGGGTCCAACCTTTGGGGGGTTCATCGTCCAACATACGAACTGGCCCTG
GGTGTTCTGGTGGATCGTGATCGCGCAGGGACTTGTTCTCATCCTTGCAT
TCTTTTTCTTGGAAGAGACCAGCTACCCTCGTGAGGGGAAGATGTTATCG
ATTGTCATGCCTAAGAGCTTCTGGGCAAAGCGAATGGCCACACTGCTTCC
TCATAAGACGGGGATTTCCCGCGCAGAACTGGGTCGCATCGCTCGGCTAC
CCTTCCGGGTTGGTTTCTCGCCCGTTGGTCTGCTTATTGGCATCTTCCAA
CTAGCATCTTTTGGCTGGTTCGTCGCAACGCACAGCCTCTTGACTGTCTG
GCTGGAGAAACCTGTCTCCGTCGGCGGATGGGGATTTAGTCCTCAACGGA
ACGCCTTCTTCATCTTCTCCCTCTGGGTTGGCCTTCTGACGGCCGAAATA
TGGGGCTACCTCTGTAACGACCGCATCGCTCTATGGATCTGCCGCACGCG
CGAGAAGGGTGTATGGAAGCCTGAGTGTCGGCTACATGCCCTCTGGGTCC
CATCCCTCATTATTCTCCCCATCGGCCTCGGCATTGTCGGATCTGCTCTG
CAATACCATCTCCACTACATGGTCCTCGCCCTAGGTGCCTACCTCATCAC
CTTCGCCTCGATGAGCTCTGTCCCAATCGCTGTAACTTACATGATCGAAT
GTGTCGCCTCGCAGCCCACCGAGATGGGTGCGTTTATGGGCGCTTATCGT
CTTACACTGGGGTTGGTCGTGCCGTTCTTCATCGATCAGTGGGTGGCCCG
GGTGGGCTTCGGTTGGGTATATGGGATGATGGCTTTCTTTTCGATTTTTG
CTTTTGGGTTCGTGGTTATGTTGATGCTGTTTGGTGATAGGTTAAGGGAG
CGGACGTTGGCCAAATTGGCTCCTAGTGAAATAGGGGCCAAGGTTATATA
TACCAGCGATGAGGAGGGACGTTAAATGGAAAAGCCTACGGATGATTTAC
CTACTCCTTTGGACACCAAAGACCATGCGGCGTTTAAATCCTTCGACCTA
TCAAGTGACGGGCTACGGACAAAAGACGGCGTTGTCTTAGTTCCTCAACC
ATCCCAAGATCCTGAAGACCCATTGAATTGGGCCAAAGGTCGGAAGTTGA
GAAACCTGACTATCCTCTGTATGGCAGGGTTCGCAGGGACCGCACTAGAT
CTGGCGAACCAACTTGCTATGAAGGACCAGGCGAAAAATTGGGATAAGGA
ACTTATAGAGATTACTTACACCATCTCTGCCTCGATCGCAGGTATTGCCT
ATGGGCCATTGCTGATTAATCCGGTGGCGCAAGCATTTGGTCGCACTGCG
ATTATATTTTGGTGCCTGGTGTTTGCGATGGCCTGTGCTATATGGTCAGC
TTGCATGACAAGCAAAGGCGACTATGAGCGTTTTGTTGCATCGCGTCTGT
TTGACGGTATATTCGGATCAATCCCCTCCATCGTTGGCGTGGGAGCCGTG
TATGACATGTTTTTCTTGCATGAGCGTGGCAAGGCATATGCCATCTTCCA
TGTCTCCTTCCTGTTTGGCACGGTTGCGGGTCCAACCTTTGGGGGGTTCA
TCGTCCAACATACGAACTGGCCCTGGGTGTTCTGGTGGATCGTGATCGCG
CAGGGACTTGTTCTCATCCTTGCATTCTTTTTCTTGGAAGAGACCAGCTA
CCCTCGTGAGGGGAAGATGTTATCGATTGTCATGCCTAAGAGCTTCTGGG
CAAAGCGAATGGCCACACTGCTTCCTCATAAGACGGGGATTTCCCGCGCA
GAACTGGGTCGCATCGCTCGGCTACCCTTCCGGGTTGGTTTCTCGCCCGT
TGGTCTGCTTATTGGCATCTTCCAACTAGCATCTTTTGGCTGGTTCGTCG
CAACGCACAGCCTCTTGACTGTCTGGCTGGAGAAACCTGTCTCCGTCGGC
GGATGGGGATTTAGTCCTCAACGGAACGCCTTCTTCATCTTCTCCCTCTG
GGTTGGCCTTCTGACGGCCGAAATATGGGGCTACCTCTGTAACGACCGCA
TCGCTCTATGGATCTGCCGCACGCGCGAGAAGGGTGTATGGAAGCCTGAG
TGTCGGCTACATGCCCTCTGGGTCCCATCCCTCATTATTCTCCCCATCGG
CCTCGGCATTGTCGGATCTGCTCTGCAATACCATCTCCACTACATGGTCC
TCGCCCTAGGTGCCTACCTCATCACCTTCGCCTCGATGAGCTCTGTCCCA
ATCGCTGTAACTTACATGATCGAATGTGTCGCCTCGCAGCCCACCGAGAT
GGGTGCGTTTATGGGCGCTTATCGTCTTACACTGGGGTTGGTCGTGCCGT
TCTTCATCGATCAGTGGGTGGCCCGGGTGGGCTTCGGTTGGGTATATGGG
ATGATGGCTTTCTTTTCGATTTTTGCTTTTGGGTTCGTGGTTATGTTGAT
GCTGTTTGGTGATAGGTTAAGGGAGCGGACGTTGGCCAAATTGGCTCCTA
GTGAAATAGGGGCCAAGGTTATATATACCAGCGATGAGGAGGGACGTTAA
ATGGAAAAGCCTACGGATGATTTACCTACTCCTTTGGACACCAAAGACCA
TGCGGCGTTTAAATCCTTCGACCTATCAAGTGACGGGCTACGGACAAAAG
ACGGCGTTGTCTTAGTTCCTCAACCATCCCAAGATCCTGAAGACCCATTG
AATTGGGCCAAAGGTCGGAAGTTGAGAAACCTGACTATCCTCTGTATGGC
AGGGTTCGCAGGGACCGCACTAGATCTGGCGAACCAACTTGCTATGAAGG
ACCAGGCGAAAAATTGGGATAAGGAACTTATAGAGATTACTTACACCATC
TCTGCCTCGATCGCAGGTATTGCCTATGGGCCATTGCTGATTAATCCGGT
GGCGCAAGCATTTGGTCGCACTGCGATTATATTTTGGTGCCTGGTGTTTG
CGATGGCCTGTGCTATATGGTCAGCTTGCATGACAAGCAAAGGCGACTAT
GAGCGTTTTGTTGCATCGCGTCTGTTTGACGGTATATTCGGATCAATCCC
CTCCATCGTTGGCGTGGGAGCCGTGTATGACATGTTTTTCTTGCATGAGC
GTGGCAAGGCATATGCCATCTTCCATGTCTCCTTCCTGTTTGGCACGGTT
GCGGGTCCAACCTTTGGGGGGTTCATCGTCCAACATACGAACTGGCCCTG
GGTGTTCTGGTGGATCGTGATCGCGCAGGGACTTGTTCTCATCCTTGCAT
TCTTTTTCTTGGAAGAGACCAGCTACCCTCGTGAGGGGAAGATGTTATCG
ATTGTCATGCCTAAGAGCTTCTGGGCAAAGCGAATGGCCACACTGCTTCC
TCATAAGACGGGGATTTCCCGCGCAGAACTGGGTCGCATCGCTCGGCTAC
CCTTCCGGGTTGGTTTCTCGCCCGTTGGTCTGCTTATTGGCATCTTCCAA
CTAGCATCTTTTGGCTGGTTCGTCGCAACGCACAGCCTCTTGACTGTCTG
GCTGGAGAAACCTGTCTCCGTCGGCGGATGGGGATTTAGTCCTCAACGGA
ACGCCTTCTTCATCTTCTCCCTCTGGGTTGGCCTTCTGACGGCCGAAATA
TGGGGCTACCTCTGTAACGACCGCATCGCTCTATGGATCTGCCGCACGCG
CGAGAAGGGTGTATGGAAGCCTGAGTGTCGGCTACATGCCCTCTGGGTCC
CATCCCTCATTATTCTCCCCATCGGCCTCGGCATTGTCGGATCTGCTCTG
CAATACCATCTCCACTACATGGTCCTCGCCCTAGGTGCCTACCTCATCAC
CTTCGCCTCGATGAGCTCTGTCCCAATCGCTGTAACTTACATGATCGAAT
GTGTCGCCTCGCAGCCCACCGAGATGGGTGCGTTTATGGGCGCTTATCGT
CTTACACTGGGGTTGGTCGTGCCGTTCTTCATCGATCAGTGGGTGGCCCG
GGTGGGCTTCGGTTGGGTATATGGGATGATGGCTTTCTTTTCGATTTTTG
CTTTTGGGTTCGTGGTTATGTTGATGCTGTTTGGTGATAGGTTAAGGGAG
CGGACGTTGGCCAAATTGGCTCCTAGTGAAATAGGGGCCAAGGTTATATA
TACCAGCGATGAGGAGGGACGTTAAATGGAAAAGCCTACGGATGATTTAC
CTACTCCTTTGGACACCAAAGACCATGCGGCGTTTAAATCCTTCGACCTA
TCAAGTGACGGGCTACGGACAAAAGACGGCGTTGTCTTAGTTCCTCAACC
ATCCCAAGATCCTGAAGACCCATTGAATTGGGCCAAAGGTCGGAAGTTGA
GAAACCTGACTATCCTCTGTATGGCAGGGTTCGCAGGGACCGCACTAGAT
CTGGCGAACCAACTTGCTATGAAGGACCAGGCGAAAAATTGGGATAAGGA
ACTTATAGAGATTACTTACACCATCTCTGCCTCGATCGCAGGTATTGCCT
ATGGGCCATTGCTGATTAATCCGGTGGCGCAAGCATTTGGTCGCACTGCG
ATTATATTTTGGTGCCTGGTGTTTGCGATGGCCTGTGCTATATGGTCAGC
TTGCATGACAAGCAAAGGCGACTATGAGCGTTTTGTTGCATCGCGTCTGT
TTGACGGTATATTCGGATCAATCCCCTCCATCGTTGGCGTGGGAGCCGTG
TATGACATGTTTTTCTTGCATGAGCGTGGCAAGGCATATGCCATCTTCCA
TGTCTCCTTCCTGTTTGGCACGGTTGCGGGTCCAACCTTTGGGGGGTTCA
TCGTCCAACATACGAACTGGCCCTGGGTGTTCTGGTGGATCGTGATCGCG
CAGGGACTTGTTCTCATCCTTGCATTCTTTTTCTTGGAAGAGACCAGCTA
CCCTCGTGAGGGGAAGATGTTATCGATTGTCATGCCTAAGAGCTTCTGGG
CAAAGCGAATGGCCACACTGCTTCCTCATAAGACGGGGATTTCCCGCGCA
GAACTGGGTCGCATCGCTCGGCTACCCTTCCGGGTTGGTTTCTCGCCCGT
TGGTCTGCTTATTGGCATCTTCCAACTAGCATCTTTTGGCTGGTTCGTCG
CAACGCACAGCCTCTTGACTGTCTGGCTGGAGAAACCTGTCTCCGTCGGC
GGATGGGGATTTAGTCCTCAACGGAACGCCTTCTTCATCTTCTCCCTCTG
GGTTGGCCTTCTGACGGCCGAAATATGGGGCTACCTCTGTAACGACCGCA
TCGCTCTATGGATCTGCCGCACGCGCGAGAAGGGTGTATGGAAGCCTGAG
TGTCGGCTACATGCCCTCTGGGTCCCATCCCTCATTATTCTCCCCATCGG
CCTCGGCATTGTCGGATCTGCTCTGCAATACCATCTCCACTACATGGTCC
TCGCCCTAGGTGCCTACCTCATCACCTTCGCCTCGATGAGCTCTGTCCCA
ATCGCTGTAACTTACATGATCGAATGTGTCGCCTCGCAGCCCACCGAGAT
GGGTGCGTTTATGGGCGCTTATCGTCTTACACTGGGGTTGGTCGTGCCGT
TCTTCATCGATCAGTGGGTGGCCCGGGTGGGCTTCGGTTGGGTATATGGG
ATGATGGCTTTCTTTTCGATTTTTGCTTTTGGGTTCGTGGTTATGTTGAT
GCTGTTTGGTGATAGGTTAAGGGAGCGGACGTTGGCCAAATTGGCTCCTA
GTGAAATAGGGGCCAAGGTTATATATACCAGCGATGAGGAGGGACGTTAA
ATGGAAAAGCCTACGGATGATTTACCTACTCCTTTGGACACCAAAGACCA
TGCGGCGTTTAAATCCTTCGACCTATCAAGTGACGGGCTACGGACAAAAG
ACGGCGTTGTCTTAGTTCCTCAACCATCCCAAGATCCTGAAGACCCATTG
AATTGGGCCAAAGGTCGGAAGTTGAGAAACCTGACTATCCTCTGTATGGC
AGGGTTCGCAGGGACCGCACTAGATCTGGCGAACCAACTTGCTATGAAGG
ACCAGGCGAAAAATTGGGATAAGGAACTTATAGAGATTACTTACACCATC
TCTGCCTCGATCGCAGGTATTGCCTATGGGCCATTGCTGATTAATCCGGT
GGCGCAAGCATTTGGTCGCACTGCGATTATATTTTGGTGCCTGGTGTTTG
CGATGGCCTGTGCTATATGGTCAGCTTGCATGACAAGCAAAGGCGACTAT
GAGCGTTTTGTTGCATCGCGTCTGTTTGACGGTATATTCGGATCAATCCC
CTCCATCGTTGGCGTGGGAGCCGTGTATGACATGTTTTTCTTGCATGAGC
GTGGCAAGGCATATGCCATCTTCCATGTCTCCTTCCTGTTTGGCACGGTT
GCGGGTCCAACCTTTGGGGGGTTCATCGTCCAACATACGAACTGGCCCTG
GGTGTTCTGGTGGATCGTGATCGCGCAGGGACTTGTTCTCATCCTTGCAT
TCTTTTTCTTGGAAGAGACCAGCTACCCTCGTGAGGGGAAGATGTTATCG
ATTGTCATGCCTAAGAGCTTCTGGGCAAAGCGAATGGCCACACTGCTTCC
TCATAAGACGGGGATTTCCCGCGCAGAACTGGGTCGCATCGCTCGGCTAC
CCTTCCGGGTTGGTTTCTCGCCCGTTGGTCTGCTTATTGGCATCTTCCAA
CTAGCATCTTTTGGCTGGTTCGTCGCAACGCACAGCCTCTTGACTGTCTG
GCTGGAGAAACCTGTCTCCGTCGGCGGATGGGGATTTAGTCCTCAACGGA
ACGCCTTCTTCATCTTCTCCCTCTGGGTTGGCCTTCTGACGGCCGAAATA
TGGGGCTACCTCTGTAACGACCGCATCGCTCTATGGATCTGCCGCACGCG
CGAGAAGGGTGTATGGAAGCCTGAGTGTCGGCTACATGCCCTCTGGGTCC
CATCCCTCATTATTCTCCCCATCGGCCTCGGCATTGTCGGATCTGCTCTG
CAATACCATCTCCACTACATGGTCCTCGCCCTAGGTGCCTACCTCATCAC
CTTCGCCTCGATGAGCTCTGTCCCAATCGCTGTAACTTACATGATCGAAT
GTGTCGCCTCGCAGCCCACCGAGATGGGTGCGTTTATGGGCGCTTATCGT
CTTACACTGGGGTTGGTCGTGCCGTTCTTCATCGATCAGTGGGTGGCCCG
GGTGGGCTTCGGTTGGGTATATGGGATGATGGCTTTCTTTTCGATTTTTG
CTTTTGGGTTCGTGGTTATGTTGATGCTGTTTGGTGATAGGTTAAGGGAG
CGGACGTTGGCCAAATTGGCTCCTAGTGAAATAGGGGCCAAGGTTATATA
TACCAGCGATGAGGAGGGACGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007637-T1.utr5p1 | KJC3_007637-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007637-T1.utr3p1 | KJC3_007637-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2996367..2998268 + |
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