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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3004655..3007217- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007640-T1 ID=KJC3_007640-T1|Name=KJC3_007640-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2563bp|location=Sequence derived from alignment at ch5:3004655..3007217- (Aspergillus niger KJC3)
AAGGGCTTGATGATCATCCGTTCCTATTGATATAGTCTGTATTCCTACAA
ACATGGCGGAGGCGTTTGAAGACTCGACCAAGTTAGCAGAGGATTGGCTC
ACGTACAGGACTGATCAGAGCACTCTTGATCCGAATTTGGGCTTCGTTGA
ACTATTCTATCAAACCTGCTCGGCTGCTCTGGTCCATCTCTGGAGATCTC
ATTTCCGATCAACAATTCGAGGGTCCCACAGAAACACATTGAAGAAGGAT
GTTGCCAACATTGATTTATGGGAAGAAAAATTTCCAATTGGGCACCTTGA
TACTATTCTGGGACGATCACAGCCCTTGAAGTTAAACGTGATCGAGAACC
TGAAGGGCATCGGAAACGTCCTAAGGCCATACTTCGCGATTTATGACTCG
AGCACACACGCAGGAAACGGGCGCGATGTCGCCCAAGATCTTGGTCAAGA
ATTAGTGACTCAGCTAGAAAAAGCTGTCATAATTTTGGACGAAGCTGCAT
CTGACTCGTCTTCAGATGATGATTCCTCTGACAACTCATCTGAGAGCAGC
GAGAGTGAGTATAATCGTTTTGGGCGGCTCCACTGCTATGTCAACTGCTT
GATGGAGCTGGTTCCAGTGATCGAGAGGAACATTTCGCGCTTGAAAAAGG
AGGAGCAGTCGCAGCACGTGCCACTCCAGAGCGAATTTCGGTTGTCCCAG
GATGCGCAGCCTTTTGCCATGCGCATTCGAGATCGGTCGGATCCCTCCCT
ACTCAATCTTTACTCTTGTAAGCTGACAGATAGGACAGATTCATATCTGC
TTCAACTCTGCTTGTGGAGCGATTAGCAGAAGCCAACCTGGAAAGATCTA
TTCGCGTCAGGGAAAATGAAGTCGACGACGAAGTATTAGATGCTCTGACT
CTATTCAAGCCCTATTCTCAGTTCTGTGATTCCGCCATCGGGACATCTCT
CGCCCCAACATCACGCTACGCTGCAACTACAGCGTCACATACCTCATTCC
TGTCAGTGACTGGAGATGAAGGGAAAGGTCGACCTCGAGTACCCCCTCTA
CCAGTAGTAGGTGGTACTTTCCGCTGCTACTACTGTGGTGATTATGTATC
TATGCCTAACAGAATTTATTGGAAGTAAGTACCTTGGTTCGAATTGCTAT
CACGAGTGGACGCGCAGCTAACTTATCAGGATGCACGTTTATTCAGATTT
GGAGTCATACCTGTGCACACATGAAGATTGCAGAGACTCCTTCAAAACGT
TCCGAAGCCGCAAGTCTTGGATGGATCATGAATACATTGCGCACTTCAGT
CAGTGTCTATGGCGTTGCTGTACATGCAATTACACAGCCTATGCCGAGAG
AGAGTTCATTGATCATTTGGTAAAAGTTCACAGCCTTGACATCGCTGGGA
GTCTTTTGAATACAACAGTGTCAAGGGCTGAGGAGAGAGTTTTGAAGCCC
CAATTCAAAGATCATAAGTGCGCACTGTGTTTAGAATCTGGTTGGAAGTC
CAAGAAGGAGTATGCAACACATGTAGGAAGGCACTTGGAAGAAGTATCTC
TCGCATGTCTTCCAATAGAGGAGGAAGGGGTTAGCGACGTTGACTCAAAT
GCTGACAGGTGGACCAATGCGACTAAGGGAAGTGAACACGAAGCTGAGAT
CATCGATGAAATATCGGAAGATAATGACGCTCAAGCCGTTTTAAAGTCGG
GCCCGGAGATTTTTGGAGTCAGTCATCCTTCGAAACGTACACCATCCAAG
GGAAGTAAGTCTCTAAGCCTCGAGAACCTGCCTCCTATCATCAAGCAGTT
CCAGTTCAGGTGCAAAGAGCCCGGCTGCAAGGCGCCTTTCAAGAGGCAGG
AGCACCTGAGGCGCCACATGAAGACCCACTCCAAAGAGAAGCCTCATGTT
TGCTGGGTGCCCGGCTGCCACCGTGCGTTCGGTCGCAGTGACAGCCTCAA
CGCCCACTACACCAAAACCCACAGCAAGCGGGGAGGACGAAACCGCTACG
TCGCTACCCTAGATGAGAATAGTTCGGACTACAACCCGGAATACCGTGGC
CAGCTCACCCCTGACGGCCGCCCTATTTGCGGATCCAAGCTCGAGGACCC
CAACCCCGATTGTGGCAACCTGAGTGTTGAGGGGCATTTACCAGTTGCTG
AGCCAGAAACATATGAGATACCGGTCGGCAAAAATCTTTTGAATACAGCA
AAACCCCCTGTATCCCCCAAGGGGGGACCATGATCCGAATCCTGTGGGTG
CTCAATCATACGACATACCTGACCCATTGGCCCTAGCACAGGTTGTTGAT
AGTAACATCCTTTACTATAGTCTACGCTCCTTCCCACGACACGGCCACCC
AGAATATTGGACGGGAACATGGCAAGTGTGTTGTCTCTGCCCATGACTTA
GAAGGCCTCACCTCTTGCAGGCCGGCAGGGAGATTAACTCAGGCTGGGCT
CCAAAAGCCGACCGCTTCCGAGGTGGCAGTGTTTATCATTACCTTTACTA
CTGAGGAAATACAAAAGATGTTGGGACACATTTCTCTCCGTCGTCTGGCT
AGCCAAGAGCGGT back to topCoding sequence (CDS) from alignment at ch5:3004655..3007217- >KJC3_007640-T1 ID=KJC3_007640-T1|Name=KJC3_007640-T1|organism=Aspergillus niger KJC3|type=CDS|length=6219bp|location=Sequence derived from alignment at ch5:3004655..3007217- (Aspergillus niger KJC3)
GATGCACGTTTATTCAGATTTGGAGTCATACCTGTGCACACATGAAGATT
GCAGAGACTCCTTCAAAACGTTCCGAAGCCGCAAGTCTTGGATGGATCAT
GAATACATTGCGCACTTCAGTCAGTGTCTATGGCGTTGCTGTACATGCAA
TTACACAGCCTATGCCGAGAGAGAGTTCATTGATCATTTGGTAAAAGTTC
ACAGCCTTGACATCGCTGGGAGTCTTTTGAATACAACAGTGTCAAGGGCT
GAGGAGAGAGTTTTGAAGCCCCAATTCAAAGATCATAAGTGCGCACTGTG
TTTAGAATCTGGTTGGAAGTCCAAGAAGGAGTATGCAACACATGTAGGAA
GGCACTTGGAAGAAGTATCTCTCGCATGTCTTCCAATAGAGGAGGAAGGG
GTTAGCGACGTTGACTCAAATGCTGACAGGTGGACCAATGCGACTAAGGG
AAGTGAACACGAAGCTGAGATCATCGATGAAATATCGGAAGATAATGACG
CTCAAGCCGTTTTAAAGTCGGGCCCGGAGATTTTTGGAGTCAGTCATCCT
TCGAAACGTACACCATCCAAGGGAAGTAAGTCTCTAAGCCTCGAGAACCT
GCCTCCTATCATCAAGCAGTTCCAGTTCAGGTGCAAAGAGCCCGGCTGCA
AGGCGCCTTTCAAGAGGCAGGAGCACCTGAGGCGCCACATGAAGACCCAC
TCCAAAGAGAAGCCTCATGTTTGCTGGGTGCCCGGCTGCCACCGTGCGTT
CGGTCGCAGTGACAGCCTCAACGCCCACTACACCAAAACCCACAGCAAGC
GGGGAGGACGAAACCGCTACGTCGCTACCCTAGATGAGAATAGTTCGGAC
TACAACCCGGAATACCGTGGCCAGCTCACCCCTGACGGCCGCCCTATTTG
CGGATCCAAGCTCGAGGACCCCAACCCCGATTGTGGCAACCTGAGTGTTG
AGGGGCATTTACCAGTTGCTGAGCCAGAAACATATGAGATACCGGTCGGC
AAAAATCTTTTGAATACAGCAAAACCCCCTGTATCCCCCAAGGGGGGACC
ATGAATTCATATCTGCTTCAACTCTGCTTGTGGAGCGATTAGCAGAAGCC
AACCTGGAAAGATCTATTCGCGTCAGGGAAAATGAAGTCGACGACGAAGT
ATTAGATGCTCTGACTCTATTCAAGCCCTATTCTCAGTTCTGTGATTCCG
CCATCGGGACATCTCTCGCCCCAACATCACGCTACGCTGCAACTACAGCG
TCACATACCTCATTCCTGTCAGTGACTGGAGATGAAGGGAAAGGTCGACC
TCGAGTACCCCCTCTACCAGTAGTAGGTGGTACTTTCCGCTGCTACTACT
GTGGTGATTATGTATCTATGCCTAACAGAATTTATTGGAAATGGCGGAGG
CGTTTGAAGACTCGACCAAGTTAGCAGAGGATTGGCTCACGTACAGGACT
GATCAGAGCACTCTTGATCCGAATTTGGGCTTCGTTGAACTATTCTATCA
AACCTGCTCGGCTGCTCTGGTCCATCTCTGGAGATCTCATTTCCGATCAA
CAATTCGAGGGTCCCACAGAAACACATTGAAGAAGGATGTTGCCAACATT
GATTTATGGGAAGAAAAATTTCCAATTGGGCACCTTGATACTATTCTGGG
ACGATCACAGCCCTTGAAGTTAAACGTGATCGAGAACCTGAAGGGCATCG
GAAACGTCCTAAGGCCATACTTCGCGATTTATGACTCGAGCACACACGCA
GGAAACGGGCGCGATGTCGCCCAAGATCTTGGTCAAGAATTAGTGACTCA
GCTAGAAAAAGCTGTCATAATTTTGGACGAAGCTGCATCTGACTCGTCTT
CAGATGATGATTCCTCTGACAACTCATCTGAGAGCAGCGAGAGTGAGTAT
AATCGTTTTGGGCGGCTCCACTGCTATGTCAACTGCTTGATGGAGCTGGT
TCCAGTGATCGAGAGGAACATTTCGCGCTTGAAAAAGGAGGAGCAGTCGC
AGCACGTGCCACTCCAGAGCGAATTTCGGTTGTCCCAGGATGCGCAGCCT
TTTGCCATGCGCATTCGAGATCGGATGCACGTTTATTCAGATTTGGAGTC
ATACCTGTGCACACATGAAGATTGCAGAGACTCCTTCAAAACGTTCCGAA
GCCGCAAGTCTTGGATGGATCATGAATACATTGCGCACTTCAGTCAGTGT
CTATGGCGTTGCTGTACATGCAATTACACAGCCTATGCCGAGAGAGAGTT
CATTGATCATTTGGTAAAAGTTCACAGCCTTGACATCGCTGGGAGTCTTT
TGAATACAACAGTGTCAAGGGCTGAGGAGAGAGTTTTGAAGCCCCAATTC
AAAGATCATAAGTGCGCACTGTGTTTAGAATCTGGTTGGAAGTCCAAGAA
GGAGTATGCAACACATGTAGGAAGGCACTTGGAAGAAGTATCTCTCGCAT
GTCTTCCAATAGAGGAGGAAGGGGTTAGCGACGTTGACTCAAATGCTGAC
AGGTGGACCAATGCGACTAAGGGAAGTGAACACGAAGCTGAGATCATCGA
TGAAATATCGGAAGATAATGACGCTCAAGCCGTTTTAAAGTCGGGCCCGG
AGATTTTTGGAGTCAGTCATCCTTCGAAACGTACACCATCCAAGGGAAGT
AAGTCTCTAAGCCTCGAGAACCTGCCTCCTATCATCAAGCAGTTCCAGTT
CAGGTGCAAAGAGCCCGGCTGCAAGGCGCCTTTCAAGAGGCAGGAGCACC
TGAGGCGCCACATGAAGACCCACTCCAAAGAGAAGCCTCATGTTTGCTGG
GTGCCCGGCTGCCACCGTGCGTTCGGTCGCAGTGACAGCCTCAACGCCCA
CTACACCAAAACCCACAGCAAGCGGGGAGGACGAAACCGCTACGTCGCTA
CCCTAGATGAGAATAGTTCGGACTACAACCCGGAATACCGTGGCCAGCTC
ACCCCTGACGGCCGCCCTATTTGCGGATCCAAGCTCGAGGACCCCAACCC
CGATTGTGGCAACCTGAGTGTTGAGGGGCATTTACCAGTTGCTGAGCCAG
AAACATATGAGATACCGGTCGGCAAAAATCTTTTGAATACAGCAAAACCC
CCTGTATCCCCCAAGGGGGGACCATGAATTCATATCTGCTTCAACTCTGC
TTGTGGAGCGATTAGCAGAAGCCAACCTGGAAAGATCTATTCGCGTCAGG
GAAAATGAAGTCGACGACGAAGTATTAGATGCTCTGACTCTATTCAAGCC
CTATTCTCAGTTCTGTGATTCCGCCATCGGGACATCTCTCGCCCCAACAT
CACGCTACGCTGCAACTACAGCGTCACATACCTCATTCCTGTCAGTGACT
GGAGATGAAGGGAAAGGTCGACCTCGAGTACCCCCTCTACCAGTAGTAGG
TGGTACTTTCCGCTGCTACTACTGTGGTGATTATGTATCTATGCCTAACA
GAATTTATTGGAAATGGCGGAGGCGTTTGAAGACTCGACCAAGTTAGCAG
AGGATTGGCTCACGTACAGGACTGATCAGAGCACTCTTGATCCGAATTTG
GGCTTCGTTGAACTATTCTATCAAACCTGCTCGGCTGCTCTGGTCCATCT
CTGGAGATCTCATTTCCGATCAACAATTCGAGGGTCCCACAGAAACACAT
TGAAGAAGGATGTTGCCAACATTGATTTATGGGAAGAAAAATTTCCAATT
GGGCACCTTGATACTATTCTGGGACGATCACAGCCCTTGAAGTTAAACGT
GATCGAGAACCTGAAGGGCATCGGAAACGTCCTAAGGCCATACTTCGCGA
TTTATGACTCGAGCACACACGCAGGAAACGGGCGCGATGTCGCCCAAGAT
CTTGGTCAAGAATTAGTGACTCAGCTAGAAAAAGCTGTCATAATTTTGGA
CGAAGCTGCATCTGACTCGTCTTCAGATGATGATTCCTCTGACAACTCAT
CTGAGAGCAGCGAGAGTGAGTATAATCGTTTTGGGCGGCTCCACTGCTAT
GTCAACTGCTTGATGGAGCTGGTTCCAGTGATCGAGAGGAACATTTCGCG
CTTGAAAAAGGAGGAGCAGTCGCAGCACGTGCCACTCCAGAGCGAATTTC
GGTTGTCCCAGGATGCGCAGCCTTTTGCCATGCGCATTCGAGATCGGATG
CACGTTTATTCAGATTTGGAGTCATACCTGTGCACACATGAAGATTGCAG
AGACTCCTTCAAAACGTTCCGAAGCCGCAAGTCTTGGATGGATCATGAAT
ACATTGCGCACTTCAGTCAGTGTCTATGGCGTTGCTGTACATGCAATTAC
ACAGCCTATGCCGAGAGAGAGTTCATTGATCATTTGGTAAAAGTTCACAG
CCTTGACATCGCTGGGAGTCTTTTGAATACAACAGTGTCAAGGGCTGAGG
AGAGAGTTTTGAAGCCCCAATTCAAAGATCATAAGTGCGCACTGTGTTTA
GAATCTGGTTGGAAGTCCAAGAAGGAGTATGCAACACATGTAGGAAGGCA
CTTGGAAGAAGTATCTCTCGCATGTCTTCCAATAGAGGAGGAAGGGGTTA
GCGACGTTGACTCAAATGCTGACAGGTGGACCAATGCGACTAAGGGAAGT
GAACACGAAGCTGAGATCATCGATGAAATATCGGAAGATAATGACGCTCA
AGCCGTTTTAAAGTCGGGCCCGGAGATTTTTGGAGTCAGTCATCCTTCGA
AACGTACACCATCCAAGGGAAGTAAGTCTCTAAGCCTCGAGAACCTGCCT
CCTATCATCAAGCAGTTCCAGTTCAGGTGCAAAGAGCCCGGCTGCAAGGC
GCCTTTCAAGAGGCAGGAGCACCTGAGGCGCCACATGAAGACCCACTCCA
AAGAGAAGCCTCATGTTTGCTGGGTGCCCGGCTGCCACCGTGCGTTCGGT
CGCAGTGACAGCCTCAACGCCCACTACACCAAAACCCACAGCAAGCGGGG
AGGACGAAACCGCTACGTCGCTACCCTAGATGAGAATAGTTCGGACTACA
ACCCGGAATACCGTGGCCAGCTCACCCCTGACGGCCGCCCTATTTGCGGA
TCCAAGCTCGAGGACCCCAACCCCGATTGTGGCAACCTGAGTGTTGAGGG
GCATTTACCAGTTGCTGAGCCAGAAACATATGAGATACCGGTCGGCAAAA
ATCTTTTGAATACAGCAAAACCCCCTGTATCCCCCAAGGGGGGACCATGA
ATTCATATCTGCTTCAACTCTGCTTGTGGAGCGATTAGCAGAAGCCAACC
TGGAAAGATCTATTCGCGTCAGGGAAAATGAAGTCGACGACGAAGTATTA
GATGCTCTGACTCTATTCAAGCCCTATTCTCAGTTCTGTGATTCCGCCAT
CGGGACATCTCTCGCCCCAACATCACGCTACGCTGCAACTACAGCGTCAC
ATACCTCATTCCTGTCAGTGACTGGAGATGAAGGGAAAGGTCGACCTCGA
GTACCCCCTCTACCAGTAGTAGGTGGTACTTTCCGCTGCTACTACTGTGG
TGATTATGTATCTATGCCTAACAGAATTTATTGGAAATGGCGGAGGCGTT
TGAAGACTCGACCAAGTTAGCAGAGGATTGGCTCACGTACAGGACTGATC
AGAGCACTCTTGATCCGAATTTGGGCTTCGTTGAACTATTCTATCAAACC
TGCTCGGCTGCTCTGGTCCATCTCTGGAGATCTCATTTCCGATCAACAAT
TCGAGGGTCCCACAGAAACACATTGAAGAAGGATGTTGCCAACATTGATT
TATGGGAAGAAAAATTTCCAATTGGGCACCTTGATACTATTCTGGGACGA
TCACAGCCCTTGAAGTTAAACGTGATCGAGAACCTGAAGGGCATCGGAAA
CGTCCTAAGGCCATACTTCGCGATTTATGACTCGAGCACACACGCAGGAA
ACGGGCGCGATGTCGCCCAAGATCTTGGTCAAGAATTAGTGACTCAGCTA
GAAAAAGCTGTCATAATTTTGGACGAAGCTGCATCTGACTCGTCTTCAGA
TGATGATTCCTCTGACAACTCATCTGAGAGCAGCGAGAGTGAGTATAATC
GTTTTGGGCGGCTCCACTGCTATGTCAACTGCTTGATGGAGCTGGTTCCA
GTGATCGAGAGGAACATTTCGCGCTTGAAAAAGGAGGAGCAGTCGCAGCA
CGTGCCACTCCAGAGCGAATTTCGGTTGTCCCAGGATGCGCAGCCTTTTG
CCATGCGCATTCGAGATCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
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| KJC3_007640-T1.utr5p1 | KJC3_007640-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3004655..3007217 - |
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