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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3011262..3012750+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007642-T1 ID=KJC3_007642-T1|Name=KJC3_007642-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1489bp|location=Sequence derived from alignment at ch5:3011262..3012750+ (Aspergillus niger KJC3)
CCGATCACACATGGCCCCTTTCCTTGGTGTTCTCTAGGTGCTTCGGAATA
GAGGAACTTTAAAGGTGGATCGACGCATCCTGAAACCATCCCCCGCCAGC
TTCGTGCGGCACCATGCTGTCGGGTAGTTCGTGCGGGTGAACCAGTCAAC
CACGAGCAGGGAACGGCCCCTACCGAATAAAAAGGTAACACCATCCCCGT
CTCACACCCTGCCATTTTCTTTCACGCCATGCAAGCTTGCACCTGGTGTG
CCAGCAGGCCTACAGGCTAGGCTACTACGCATGGCTTCTGCATCCTACAA
TGCTGGCCCTGGCATTCTGGGCCTCAATTGGGTAGCAGCTGGAATTGCCA
CCATCATCATGCTGTTGAGGCTCATTGCGAAGCATCGTATTCGCAACCTT
TCTTGGGACGATGCAATTATGATCCTTGCTTATGTATGGAACCTTTTGGG
AAGATTATACGACTAAGCTTACCATGGCAGACTTTGGCTATTGCGTCTTC
CGTCCTGATCACTATAGCAATCTCCCACGGATACGGACGACATGCTTACG
AACTCGATCGATCGGACCGCGTCTTGACTGCGAAACTTTATACAATTTTC
CAATGCGTCTCGATTCTCAGTACAGGAACGGGAAGGCTGGCTTTCGTGTT
ATACTTGCTGCCAATATTCCGACACAAATACCTCATGGGACACATCTTGT
GGCTTATATTCGCGCTTCAGCTCATTGCCAATTACGTCAGTCCTGTGACT
ATCCTGGTCCGATGCGCTGACATTCGCGCTATATGGGACATTACCGTCAA
GAGCAAATGCTGGGATCCAAAAATTCTGATAACTTATAGCTACGTGCAAT
GCAGTAAGTCCATATGCCGAATAATGTTCCATTGGATAGCGCTAATCTCG
GAAATCACAGCTATCAATACAGCAACCGACCTTTATCTCGCAATATTTCC
TGCATACACCTTGTGGAGTTTGAATCTCAAACGGCGGACGAAGACAATTC
TCATCATACTTATGGGCCTGGGGCTAGTGTATGTACGATATCTGTCGTTG
AGCCCAGCACAACTCTAACCGTTTATCCAGCGCCATGGTAGGATCAATCA
TGCGGATTATAAGCCTTCCCTCCCTCTCCATCATCGACGATCAATCTGCC
GCAACGAACCGTCTGACCATCTGGGCCTTGCTAGAATGTTACTTGGTCAT
CACTACGGCATCGATTCCATGTATTCGGACCTTGGTGATGGACTCTGTAC
GGCTACTAGTTAACAGCAGTCGATCCCGCTCAGGGAGAGAAGCAGATAGT
AGGAGGACAAGGCAGAACACTTGGGGCGATTATCCCATCTCGCGAAGCTA
CCGTGTAGCAGTGGGAGATGATGTCGAGGACAGGCGGCATATGCTGGGCG
ATGTTGAGTTGGGGCGGTATGGACATAGTGGAATAAGCAAGTTGGTCGAG
GTGACGGTTGCAGAAGAGGCGATACCAAAATGGATATAA back to topCoding sequence (CDS) from alignment at ch5:3011262..3012750+ >KJC3_007642-T1 ID=KJC3_007642-T1|Name=KJC3_007642-T1|organism=Aspergillus niger KJC3|type=CDS|length=4212bp|location=Sequence derived from alignment at ch5:3011262..3012750+ (Aspergillus niger KJC3)
ATGGCTTCTGCATCCTACAATGCTGGCCCTGGCATTCTGGGCCTCAATTG
GGTAGCAGCTGGAATTGCCACCATCATCATGCTGTTGAGGCTCATTGCGA
AGCATCGTATTCGCAACCTTTCTTGGGACGATGCAATTATGATCCTTGCT
TATACTTTGGCTATTGCGTCTTCCGTCCTGATCACTATAGCAATCTCCCA
CGGATACGGACGACATGCTTACGAACTCGATCGATCGGACCGCGTCTTGA
CTGCGAAACTTTATACAATTTTCCAATGCGTCTCGATTCTCAGTACAGGA
ACGGGAAGGCTGGCTTTCGTGTTATACTTGCTGCCAATATTCCGACACAA
ATACCTCATGGGACACATCTTGTGGCTTATATTCGCGCTTCAGCTCATTG
CCAATTACGTCAGTCCTGTGACTATCCTGGTCCGATGCGCTGACATTCGC
GCTATATGGGACATTACCGTCAAGAGCAAATGCTGGGATCCAAAAATTCT
GATAACTTATAGCTACGTGCAATGCACTATCAATACAGCAACCGACCTTT
ATCTCGCAATATTTCCTGCATACACCTTGTGGAGTTTGAATCTCAAACGG
CGGACGAAGACAATTCTCATCATACTTATGGGCCTGGGGCTAGTCGCCAT
GGTAGGATCAATCATGCGGATTATAAGCCTTCCCTCCCTCTCCATCATCG
ACGATCAATCTGCCGCAACGAACCGTCTGACCATCTGGGCCTTGCTAGAA
TGTTACTTGGTCATCACTACGGCATCGATTCCATGTATTCGGACCTTGGT
GATGGACTCTGTACGGCTACTAGTTAACAGCAGTCGATCCCGCTCAGGGA
GAGAAGCAGATAGTAGGAGGACAAGGCAGAACACTTGGGGCGATTATCCC
ATCTCGCGAAGCTACCGTGTAGCAGTGGGAGATGATGTCGAGGACAGGCG
GCATATGCTGGGCGATGTTGAGTTGGGGCGGTATGGACATAGTGGAATAA
GCAAGTTGGTCGAGGTGACGGTTGCAGAAGAGGCGATACCAAAATGGATA
TAAATGGCTTCTGCATCCTACAATGCTGGCCCTGGCATTCTGGGCCTCAA
TTGGGTAGCAGCTGGAATTGCCACCATCATCATGCTGTTGAGGCTCATTG
CGAAGCATCGTATTCGCAACCTTTCTTGGGACGATGCAATTATGATCCTT
GCTTATACTTTGGCTATTGCGTCTTCCGTCCTGATCACTATAGCAATCTC
CCACGGATACGGACGACATGCTTACGAACTCGATCGATCGGACCGCGTCT
TGACTGCGAAACTTTATACAATTTTCCAATGCGTCTCGATTCTCAGTACA
GGAACGGGAAGGCTGGCTTTCGTGTTATACTTGCTGCCAATATTCCGACA
CAAATACCTCATGGGACACATCTTGTGGCTTATATTCGCGCTTCAGCTCA
TTGCCAATTACGTCAGTCCTGTGACTATCCTGGTCCGATGCGCTGACATT
CGCGCTATATGGGACATTACCGTCAAGAGCAAATGCTGGGATCCAAAAAT
TCTGATAACTTATAGCTACGTGCAATGCACTATCAATACAGCAACCGACC
TTTATCTCGCAATATTTCCTGCATACACCTTGTGGAGTTTGAATCTCAAA
CGGCGGACGAAGACAATTCTCATCATACTTATGGGCCTGGGGCTAGTCGC
CATGGTAGGATCAATCATGCGGATTATAAGCCTTCCCTCCCTCTCCATCA
TCGACGATCAATCTGCCGCAACGAACCGTCTGACCATCTGGGCCTTGCTA
GAATGTTACTTGGTCATCACTACGGCATCGATTCCATGTATTCGGACCTT
GGTGATGGACTCTGTACGGCTACTAGTTAACAGCAGTCGATCCCGCTCAG
GGAGAGAAGCAGATAGTAGGAGGACAAGGCAGAACACTTGGGGCGATTAT
CCCATCTCGCGAAGCTACCGTGTAGCAGTGGGAGATGATGTCGAGGACAG
GCGGCATATGCTGGGCGATGTTGAGTTGGGGCGGTATGGACATAGTGGAA
TAAGCAAGTTGGTCGAGGTGACGGTTGCAGAAGAGGCGATACCAAAATGG
ATATAAATGGCTTCTGCATCCTACAATGCTGGCCCTGGCATTCTGGGCCT
CAATTGGGTAGCAGCTGGAATTGCCACCATCATCATGCTGTTGAGGCTCA
TTGCGAAGCATCGTATTCGCAACCTTTCTTGGGACGATGCAATTATGATC
CTTGCTTATACTTTGGCTATTGCGTCTTCCGTCCTGATCACTATAGCAAT
CTCCCACGGATACGGACGACATGCTTACGAACTCGATCGATCGGACCGCG
TCTTGACTGCGAAACTTTATACAATTTTCCAATGCGTCTCGATTCTCAGT
ACAGGAACGGGAAGGCTGGCTTTCGTGTTATACTTGCTGCCAATATTCCG
ACACAAATACCTCATGGGACACATCTTGTGGCTTATATTCGCGCTTCAGC
TCATTGCCAATTACGTCAGTCCTGTGACTATCCTGGTCCGATGCGCTGAC
ATTCGCGCTATATGGGACATTACCGTCAAGAGCAAATGCTGGGATCCAAA
AATTCTGATAACTTATAGCTACGTGCAATGCACTATCAATACAGCAACCG
ACCTTTATCTCGCAATATTTCCTGCATACACCTTGTGGAGTTTGAATCTC
AAACGGCGGACGAAGACAATTCTCATCATACTTATGGGCCTGGGGCTAGT
CGCCATGGTAGGATCAATCATGCGGATTATAAGCCTTCCCTCCCTCTCCA
TCATCGACGATCAATCTGCCGCAACGAACCGTCTGACCATCTGGGCCTTG
CTAGAATGTTACTTGGTCATCACTACGGCATCGATTCCATGTATTCGGAC
CTTGGTGATGGACTCTGTACGGCTACTAGTTAACAGCAGTCGATCCCGCT
CAGGGAGAGAAGCAGATAGTAGGAGGACAAGGCAGAACACTTGGGGCGAT
TATCCCATCTCGCGAAGCTACCGTGTAGCAGTGGGAGATGATGTCGAGGA
CAGGCGGCATATGCTGGGCGATGTTGAGTTGGGGCGGTATGGACATAGTG
GAATAAGCAAGTTGGTCGAGGTGACGGTTGCAGAAGAGGCGATACCAAAA
TGGATATAAATGGCTTCTGCATCCTACAATGCTGGCCCTGGCATTCTGGG
CCTCAATTGGGTAGCAGCTGGAATTGCCACCATCATCATGCTGTTGAGGC
TCATTGCGAAGCATCGTATTCGCAACCTTTCTTGGGACGATGCAATTATG
ATCCTTGCTTATACTTTGGCTATTGCGTCTTCCGTCCTGATCACTATAGC
AATCTCCCACGGATACGGACGACATGCTTACGAACTCGATCGATCGGACC
GCGTCTTGACTGCGAAACTTTATACAATTTTCCAATGCGTCTCGATTCTC
AGTACAGGAACGGGAAGGCTGGCTTTCGTGTTATACTTGCTGCCAATATT
CCGACACAAATACCTCATGGGACACATCTTGTGGCTTATATTCGCGCTTC
AGCTCATTGCCAATTACGTCAGTCCTGTGACTATCCTGGTCCGATGCGCT
GACATTCGCGCTATATGGGACATTACCGTCAAGAGCAAATGCTGGGATCC
AAAAATTCTGATAACTTATAGCTACGTGCAATGCACTATCAATACAGCAA
CCGACCTTTATCTCGCAATATTTCCTGCATACACCTTGTGGAGTTTGAAT
CTCAAACGGCGGACGAAGACAATTCTCATCATACTTATGGGCCTGGGGCT
AGTCGCCATGGTAGGATCAATCATGCGGATTATAAGCCTTCCCTCCCTCT
CCATCATCGACGATCAATCTGCCGCAACGAACCGTCTGACCATCTGGGCC
TTGCTAGAATGTTACTTGGTCATCACTACGGCATCGATTCCATGTATTCG
GACCTTGGTGATGGACTCTGTACGGCTACTAGTTAACAGCAGTCGATCCC
GCTCAGGGAGAGAAGCAGATAGTAGGAGGACAAGGCAGAACACTTGGGGC
GATTATCCCATCTCGCGAAGCTACCGTGTAGCAGTGGGAGATGATGTCGA
GGACAGGCGGCATATGCTGGGCGATGTTGAGTTGGGGCGGTATGGACATA
GTGGAATAAGCAAGTTGGTCGAGGTGACGGTTGCAGAAGAGGCGATACCA
AAATGGATATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007642-T1.utr5p1 | KJC3_007642-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3011262..3012750 + |
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