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KJC3_007656-T1, KJC3_007656-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007656-T1
Unique NameKJC3_007656-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3051895..3053047-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007656-T1 ID=KJC3_007656-T1|Name=KJC3_007656-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1153bp|location=Sequence derived from alignment at ch5:3051895..3053047- (Aspergillus niger KJC3)
AGGAAATATGGGGTAGATACAAGTCCATTGATAGGCTATCAGGTCTATCG
GTGAGTAAGTGATTGATTATATATGCTAACTCAAATGTTGAACCTACTCC
TAACCACTTCCAACCCACCGCTAACAACAACCAGAATCCCTCTCCATCCA
TCCATCCAGGAAAACCCCCCCAAGATGGCCATAACCCAGACACCGGAAAC
CCTATCCAGCCAGGAAACGCGGCTTCTGGCCCGGCAAAACACCATCACCA
ACACGGCGGGCTACTCGGGGAACAACCTGCAAGCCAACCTTCTCATTCTG
CCAGAAAAACACAGCCAGGACTTCCACAACCTCTGTCTTCGCAACCCAGT
ATCCTGCCCCCTCCTAGGAATCAGCAGCATCCCGGGAAACCCCCACAAAA
TCACCCCAACGCCATGCATCCAGAACCGCGACTTCGACATCCGCACCGAC
TGCCCATCCTACCGAGTCTACAAGCACGGCAAATGCATCGCGGCCAACAA
ACCCGACCTCCTCGATCTGTGGTCCACCGATGACCCAAATGCCGAAAATT
ACACAGCCTTCCTCCTGGGGTGCTCCTTCAGCTTCGAAGCCGCCCTGTGC
AATGCAACCCCGCCCTTAACCCCGCGGCACCAACTCAGCAACACCATCGT
GTCCATGTACCGCACGTCATTGCCCCTCCTGCCTGCAGGCATCTTCACCA
ACGCAACATGCATCGTGTCCATGCGTCCATACCACGAATCAGAGGTCGAG
AGGGTGCGGGACATCACGCGCCCGTATCTAGCTACGCACGGGGAGCCCGT
CGATTGGGGCTGGGATGCGGTGAAGCGTCTGGGCATTCGGAATATTCATG
ATCCGGATTTTGGGGAGAAGATTGAGTTTAAGGATGGGGAGGTGCCGGTT
TTTTGGGTATGCAAGATATGCTTTTTGTTTAAATTTTTTGATGAGGTGTA
TGTGATTATGCTAACGCGGGATGATGGTTAGGCGTGTGGAGTGACGCCGC
AGATGGCGATCGAGGCGGCCGGGGATAAGATTGATGGGTTGGTGTTTGCG
CATGAGCCGGGGAATATGCTGGTGACGGATTGGGTGGTCGAGGATTTGGA
GAGGCTGAAGGAAGGGATTGCGGCTTTCCAGGGATGGATGAATTAGACTA
GAG
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Coding sequence (CDS) from alignment at ch5:3051895..3053047-

>KJC3_007656-T1 ID=KJC3_007656-T1|Name=KJC3_007656-T1|organism=Aspergillus niger KJC3|type=CDS|length=1998bp|location=Sequence derived from alignment at ch5:3051895..3053047- (Aspergillus niger KJC3)
GCGTGTGGAGTGACGCCGCAGATGGCGATCGAGGCGGCCGGGGATAAGAT
TGATGGGTTGGTGTTTGCGCATGAGCCGGGGAATATGCTGGTGACGGATT
GGGTGGTCGAGGATTTGGAGAGGCTGAAGGAAGGGATTGCGGCTTTCCAG
GGATGGATGAATTAGATGCTAACTCAAATGTTGAACCTACTCCTAACCAC
TTCCAACCCACCGCTAACAACAACCAGAATCCCTCTCCATCCATCCATCC
AGGAAAACCCCCCCAAGATGGCCATAACCCAGACACCGGAAACCCTATCC
AGCCAGGAAACGCGGCTTCTGGCCCGGCAAAACACCATCACCAACACGGC
GGGCTACTCGGGGAACAACCTGCAAGCCAACCTTCTCATTCTGCCAGAAA
AACACAGCCAGGACTTCCACAACCTCTGTCTTCGCAACCCAGTATCCTGC
CCCCTCCTAGGAATCAGCAGCATCCCGGGAAACCCCCACAAAATCACCCC
AACGCCATGCATCCAGAACCGCGACTTCGACATCCGCACCGACTGCCCAT
CCTACCGAGTCTACAAGCACGGCAAATGCATCGCGGCCAACAAACCCGAC
CTCCTCGATCTGTGGTCCACCGATGACCCAAATGCCGAAAATTACACAGC
CTTCCTCCTGGGGTGCTCCTTCAGCTTCGAAGCCGCCCTGTGCAATGCAA
CCCCGCCCTTAACCCCGCGGCACCAACTCAGCAACACCATCGTGTCCATG
TACCGCACGTCATTGCCCCTCCTGCCTGCAGGCATCTTCACCAACGCAAC
ATGCATCGTGTCCATGCGTCCATACCACGAATCAGAGGTCGAGAGGGTGC
GGGACATCACGCGCCCGTATCTAGCTACGCACGGGGAGCCCGTCGATTGG
GGCTGGGATGCGGTGAAGCGTCTGGGCATTCGGAATATTCATGATCCGGA
TTTTGGGGAGAAGATTGAGTTTAAGGATGGGGAGGTGCCGGTTTTTTGGG
CGTGTGGAGTGACGCCGCAGATGGCGATCGAGGCGGCCGGGGATAAGATT
GATGGGTTGGTGTTTGCGCATGAGCCGGGGAATATGCTGGTGACGGATTG
GGTGGTCGAGGATTTGGAGAGGCTGAAGGAAGGGATTGCGGCTTTCCAGG
GATGGATGAATTAGATGCTAACTCAAATGTTGAACCTACTCCTAACCACT
TCCAACCCACCGCTAACAACAACCAGAATCCCTCTCCATCCATCCATCCA
GGAAAACCCCCCCAAGATGGCCATAACCCAGACACCGGAAACCCTATCCA
GCCAGGAAACGCGGCTTCTGGCCCGGCAAAACACCATCACCAACACGGCG
GGCTACTCGGGGAACAACCTGCAAGCCAACCTTCTCATTCTGCCAGAAAA
ACACAGCCAGGACTTCCACAACCTCTGTCTTCGCAACCCAGTATCCTGCC
CCCTCCTAGGAATCAGCAGCATCCCGGGAAACCCCCACAAAATCACCCCA
ACGCCATGCATCCAGAACCGCGACTTCGACATCCGCACCGACTGCCCATC
CTACCGAGTCTACAAGCACGGCAAATGCATCGCGGCCAACAAACCCGACC
TCCTCGATCTGTGGTCCACCGATGACCCAAATGCCGAAAATTACACAGCC
TTCCTCCTGGGGTGCTCCTTCAGCTTCGAAGCCGCCCTGTGCAATGCAAC
CCCGCCCTTAACCCCGCGGCACCAACTCAGCAACACCATCGTGTCCATGT
ACCGCACGTCATTGCCCCTCCTGCCTGCAGGCATCTTCACCAACGCAACA
TGCATCGTGTCCATGCGTCCATACCACGAATCAGAGGTCGAGAGGGTGCG
GGACATCACGCGCCCGTATCTAGCTACGCACGGGGAGCCCGTCGATTGGG
GCTGGGATGCGGTGAAGCGTCTGGGCATTCGGAATATTCATGATCCGGAT
TTTGGGGAGAAGATTGAGTTTAAGGATGGGGAGGTGCCGGTTTTTTGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007656KJC3_007656Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007656-T1KJC3_007656-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007656-T1.cdsKJC3_007656-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007656-T1.utr3p1KJC3_007656-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007656-T1.exon2KJC3_007656-T1.exon2Aspergillus niger KJC3exon
KJC3_007656-T1.exon1KJC3_007656-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007656-T1.utr5p1KJC3_007656-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038021
DBxrefInterPro:IPR009906
DBxrefPFAM:PF07286
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3051895..3053047 -
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