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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3053321..3055101+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007657-T1 ID=KJC3_007657-T1|Name=KJC3_007657-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1781bp|location=Sequence derived from alignment at ch5:3053321..3055101+ (Aspergillus niger KJC3)
CCTGAGGGCTGGTCCATGGTTCTTAACCCCAGATCCTCCGCTGTTGACGT
TTTCATCATTCTTCCTTCTCCCCCACATCCTCCTGGGTCTTCACAGCTCA
TCCTCTCTCCATCATGACTATCGATCAGATGGATCCCGTAGTTGAGCGAA
AATCGCTCGAGAAGCCAATTGAGCAGGCGTCTCCTGAAGAGACTGCCATT
GGGGATATTGACGATGTCGTCCTCGACCCAGCCAAGGAGAAGAAGCTTCT
CATGAAGCTCGATATGGCCTTTGTGCCCATTATCATGTTGACCTACCTGT
CTTGCTTCCTCGACCGTAGTAACATCGGTGAATATCCCCCAATGCACGTT
CCCCACGAGGATGGATATCGCTAATGATTTTTATTTCAGGTAATGTCAAG
GTAGCTGGCATGCCTGAAGACATCCACGCCTCCGACAGCGAGTATTCTAC
CGCCGTGTCCATCTTCTACGCTACCTACGTGCTATTAGAGGCACCTTGGG
CCGTGGCAATGAAGAAGCTCACTCCGCGGAATATCCTCACCGGTCTATGC
ATCATCTGGTCAATTACCACCGTGTTTACGGGCTTCATCCACAATGTCGC
CTCGCTGTACGCAACACGGTTGATCCTCGGTGGCTGCGAAGCCGGACTCT
TCCCGTGTCTAAACCTGTATTTGACCATGGTGTATCGTCGAGAAGAGCAA
GCAAAGCGCGTCTCATACCTGATGAGCTGCGCCGCCATCTCCGGTGCCGT
GGGAGGTCTACTCGCATATGCATTGTTGCACATGGACGGTGTAGGCGGCA
AAGCCGGCTGGAGGTAAGCTACCCGTGTACCCCTCCCTATCACCCCATCA
ACACTTTCTAACAAAAACCACAAAGATGGGTCTACATCATCGAAGGACTC
TTCAGTCTAGTGTGCGCCATCCTCATCTGGTTCGGTCTTCCCAACGACCC
CAGCAACGCCTACTTCCTCACCGCCGAAGAGAAATACATGATGCGCGTGC
GCAACGAACAACGCCGGAAGTACATGGGCAGTGAGCACTTCAGCTGGGAG
GAGATGCGCATTGCTCTTCGTGATCCCAAGCTCATGTTCTCTGCCCTCAC
GCAGTTCTGTCAGGATATTCTCCTCTACGGATTCAGTACTTTCCTTCCTA
CTATCTTGGGGAGTCTGGGGTATAATAGTCTCATGAGTAATGTGCTCACG
GTACCGGTGTATATCTGGGCTGCGATCGTGTTTATTGCTGTCGCGTTTTG
CGCGGATCGCTTTGGGAGGTTTTCTATCGTAAGTTTCCTCCCCCCAGATC
CTAACATATATTCATTACGGGATAACGTGTGTGCTAACGATGGGAACAGT
TCATCCTAGCCACCAACATCTTCGGCATCGTCGGCTACATCCTCCTCCTG
ACTGTGTCCAACGACGCCGTCAAATACTTCGCTACTTACCTCTGCGGTGT
GGCTGTCTACACCGGCGTCGGACTGAACGTCGCCTGGTTGAACGTCAACG
TGGCGCCTCAGTACCGTCGTGCACTCGCCATCGGTCTCCAGCAGACAGTG
GGTAACTGCGCCGGTATTGTAGCGGGCCAGGTCTATCGCACGTCGCCGTA
TGTACTAGGGAATGCCTTCTCGTTGGGGGCATTGGTGGTATCGCAGGTAA
TTGTCGCGCTTCATGCGGTGTATCTGAGACGGGAGAATAAGGTGAAAGAG
GAGATTCTGGCGGGCGAAAAGGAGGATACGCGAAGAGTGAAGACAGGTGA
TGGCGAGGTGGAGTTCAGATACCATACTTAA back to topCoding sequence (CDS) from alignment at ch5:3053321..3055101+ >KJC3_007657-T1 ID=KJC3_007657-T1|Name=KJC3_007657-T1|organism=Aspergillus niger KJC3|type=CDS|length=5892bp|location=Sequence derived from alignment at ch5:3053321..3055101+ (Aspergillus niger KJC3)
ATGACTATCGATCAGATGGATCCCGTAGTTGAGCGAAAATCGCTCGAGAA
GCCAATTGAGCAGGCGTCTCCTGAAGAGACTGCCATTGGGGATATTGACG
ATGTCGTCCTCGACCCAGCCAAGGAGAAGAAGCTTCTCATGAAGCTCGAT
ATGGCCTTTGTGCCCATTATCATGTTGACCTACCTGTCTTGCTTCCTCGA
CCGTAGTAACATCGGTAATGTCAAGGTAGCTGGCATGCCTGAAGACATCC
ACGCCTCCGACAGCGAGTATTCTACCGCCGTGTCCATCTTCTACGCTACC
TACGTGCTATTAGAGGCACCTTGGGCCGTGGCAATGAAGAAGCTCACTCC
GCGGAATATCCTCACCGGTCTATGCATCATCTGGTCAATTACCACCGTGT
TTACGGGCTTCATCCACAATGTCGCCTCGCTGTACGCAACACGGTTGATC
CTCGGTGGCTGCGAAGCCGGACTCTTCCCGTGTCTAAACCTGTATTTGAC
CATGGTGTATCGTCGAGAAGAGCAAGCAAAGCGCGTCTCATACCTGATGA
GCTGCGCCGCCATCTCCGGTGCCGTGGGAGGTCTACTCGCATATGCATTG
TTGCACATGGACGGTGTAGGCGGCAAAGCCGGCTGGAGATGGGTCTACAT
CATCGAAGGACTCTTCAGTCTAGTGTGCGCCATCCTCATCTGGTTCGGTC
TTCCCAACGACCCCAGCAACGCCTACTTCCTCACCGCCGAAGAGAAATAC
ATGATGCGCGTGCGCAACGAACAACGCCGGAAGTACATGGGCAGTGAGCA
CTTCAGCTGGGAGGAGATGCGCATTGCTCTTCGTGATCCCAAGCTCATGT
TCTCTGCCCTCACGCAGTTCTGTCAGGATATTCTCCTCTACGGATTCAGT
ACTTTCCTTCCTACTATCTTGGGGAGTCTGGGGTATAATAGTCTCATGAG
TAATGTGCTCACGGTACCGGTGTATATCTGGGCTGCGATCGTGTTTATTG
CTGTCGCGTTTTGCGCGGATCGCTTTGGGAGGTTTTCTATCTTCATCCTA
GCCACCAACATCTTCGGCATCGTCGGCTACATCCTCCTCCTGACTGTGTC
CAACGACGCCGTCAAATACTTCGCTACTTACCTCTGCGGTGTGGCTGTCT
ACACCGGCGTCGGACTGAACGTCGCCTGGTTGAACGTCAACGTGGCGCCT
CAGTACCGTCGTGCACTCGCCATCGGTCTCCAGCAGACAGTGGGTAACTG
CGCCGGTATTGTAGCGGGCCAGGTCTATCGCACGTCGCCGTATGTACTAG
GGAATGCCTTCTCGTTGGGGGCATTGGTGGTATCGCAGGTAATTGTCGCG
CTTCATGCGGTGTATCTGAGACGGGAGAATAAGGTGAAAGAGGAGATTCT
GGCGGGCGAAAAGGAGGATACGCGAAGAGTGAAGACAGGTGATGGCGAGG
TGGAGTTCAGATACCATACTTAAATGACTATCGATCAGATGGATCCCGTA
GTTGAGCGAAAATCGCTCGAGAAGCCAATTGAGCAGGCGTCTCCTGAAGA
GACTGCCATTGGGGATATTGACGATGTCGTCCTCGACCCAGCCAAGGAGA
AGAAGCTTCTCATGAAGCTCGATATGGCCTTTGTGCCCATTATCATGTTG
ACCTACCTGTCTTGCTTCCTCGACCGTAGTAACATCGGTAATGTCAAGGT
AGCTGGCATGCCTGAAGACATCCACGCCTCCGACAGCGAGTATTCTACCG
CCGTGTCCATCTTCTACGCTACCTACGTGCTATTAGAGGCACCTTGGGCC
GTGGCAATGAAGAAGCTCACTCCGCGGAATATCCTCACCGGTCTATGCAT
CATCTGGTCAATTACCACCGTGTTTACGGGCTTCATCCACAATGTCGCCT
CGCTGTACGCAACACGGTTGATCCTCGGTGGCTGCGAAGCCGGACTCTTC
CCGTGTCTAAACCTGTATTTGACCATGGTGTATCGTCGAGAAGAGCAAGC
AAAGCGCGTCTCATACCTGATGAGCTGCGCCGCCATCTCCGGTGCCGTGG
GAGGTCTACTCGCATATGCATTGTTGCACATGGACGGTGTAGGCGGCAAA
GCCGGCTGGAGATGGGTCTACATCATCGAAGGACTCTTCAGTCTAGTGTG
CGCCATCCTCATCTGGTTCGGTCTTCCCAACGACCCCAGCAACGCCTACT
TCCTCACCGCCGAAGAGAAATACATGATGCGCGTGCGCAACGAACAACGC
CGGAAGTACATGGGCAGTGAGCACTTCAGCTGGGAGGAGATGCGCATTGC
TCTTCGTGATCCCAAGCTCATGTTCTCTGCCCTCACGCAGTTCTGTCAGG
ATATTCTCCTCTACGGATTCAGTACTTTCCTTCCTACTATCTTGGGGAGT
CTGGGGTATAATAGTCTCATGAGTAATGTGCTCACGGTACCGGTGTATAT
CTGGGCTGCGATCGTGTTTATTGCTGTCGCGTTTTGCGCGGATCGCTTTG
GGAGGTTTTCTATCTTCATCCTAGCCACCAACATCTTCGGCATCGTCGGC
TACATCCTCCTCCTGACTGTGTCCAACGACGCCGTCAAATACTTCGCTAC
TTACCTCTGCGGTGTGGCTGTCTACACCGGCGTCGGACTGAACGTCGCCT
GGTTGAACGTCAACGTGGCGCCTCAGTACCGTCGTGCACTCGCCATCGGT
CTCCAGCAGACAGTGGGTAACTGCGCCGGTATTGTAGCGGGCCAGGTCTA
TCGCACGTCGCCGTATGTACTAGGGAATGCCTTCTCGTTGGGGGCATTGG
TGGTATCGCAGGTAATTGTCGCGCTTCATGCGGTGTATCTGAGACGGGAG
AATAAGGTGAAAGAGGAGATTCTGGCGGGCGAAAAGGAGGATACGCGAAG
AGTGAAGACAGGTGATGGCGAGGTGGAGTTCAGATACCATACTTAAATGA
CTATCGATCAGATGGATCCCGTAGTTGAGCGAAAATCGCTCGAGAAGCCA
ATTGAGCAGGCGTCTCCTGAAGAGACTGCCATTGGGGATATTGACGATGT
CGTCCTCGACCCAGCCAAGGAGAAGAAGCTTCTCATGAAGCTCGATATGG
CCTTTGTGCCCATTATCATGTTGACCTACCTGTCTTGCTTCCTCGACCGT
AGTAACATCGGTAATGTCAAGGTAGCTGGCATGCCTGAAGACATCCACGC
CTCCGACAGCGAGTATTCTACCGCCGTGTCCATCTTCTACGCTACCTACG
TGCTATTAGAGGCACCTTGGGCCGTGGCAATGAAGAAGCTCACTCCGCGG
AATATCCTCACCGGTCTATGCATCATCTGGTCAATTACCACCGTGTTTAC
GGGCTTCATCCACAATGTCGCCTCGCTGTACGCAACACGGTTGATCCTCG
GTGGCTGCGAAGCCGGACTCTTCCCGTGTCTAAACCTGTATTTGACCATG
GTGTATCGTCGAGAAGAGCAAGCAAAGCGCGTCTCATACCTGATGAGCTG
CGCCGCCATCTCCGGTGCCGTGGGAGGTCTACTCGCATATGCATTGTTGC
ACATGGACGGTGTAGGCGGCAAAGCCGGCTGGAGATGGGTCTACATCATC
GAAGGACTCTTCAGTCTAGTGTGCGCCATCCTCATCTGGTTCGGTCTTCC
CAACGACCCCAGCAACGCCTACTTCCTCACCGCCGAAGAGAAATACATGA
TGCGCGTGCGCAACGAACAACGCCGGAAGTACATGGGCAGTGAGCACTTC
AGCTGGGAGGAGATGCGCATTGCTCTTCGTGATCCCAAGCTCATGTTCTC
TGCCCTCACGCAGTTCTGTCAGGATATTCTCCTCTACGGATTCAGTACTT
TCCTTCCTACTATCTTGGGGAGTCTGGGGTATAATAGTCTCATGAGTAAT
GTGCTCACGGTACCGGTGTATATCTGGGCTGCGATCGTGTTTATTGCTGT
CGCGTTTTGCGCGGATCGCTTTGGGAGGTTTTCTATCTTCATCCTAGCCA
CCAACATCTTCGGCATCGTCGGCTACATCCTCCTCCTGACTGTGTCCAAC
GACGCCGTCAAATACTTCGCTACTTACCTCTGCGGTGTGGCTGTCTACAC
CGGCGTCGGACTGAACGTCGCCTGGTTGAACGTCAACGTGGCGCCTCAGT
ACCGTCGTGCACTCGCCATCGGTCTCCAGCAGACAGTGGGTAACTGCGCC
GGTATTGTAGCGGGCCAGGTCTATCGCACGTCGCCGTATGTACTAGGGAA
TGCCTTCTCGTTGGGGGCATTGGTGGTATCGCAGGTAATTGTCGCGCTTC
ATGCGGTGTATCTGAGACGGGAGAATAAGGTGAAAGAGGAGATTCTGGCG
GGCGAAAAGGAGGATACGCGAAGAGTGAAGACAGGTGATGGCGAGGTGGA
GTTCAGATACCATACTTAAATGACTATCGATCAGATGGATCCCGTAGTTG
AGCGAAAATCGCTCGAGAAGCCAATTGAGCAGGCGTCTCCTGAAGAGACT
GCCATTGGGGATATTGACGATGTCGTCCTCGACCCAGCCAAGGAGAAGAA
GCTTCTCATGAAGCTCGATATGGCCTTTGTGCCCATTATCATGTTGACCT
ACCTGTCTTGCTTCCTCGACCGTAGTAACATCGGTAATGTCAAGGTAGCT
GGCATGCCTGAAGACATCCACGCCTCCGACAGCGAGTATTCTACCGCCGT
GTCCATCTTCTACGCTACCTACGTGCTATTAGAGGCACCTTGGGCCGTGG
CAATGAAGAAGCTCACTCCGCGGAATATCCTCACCGGTCTATGCATCATC
TGGTCAATTACCACCGTGTTTACGGGCTTCATCCACAATGTCGCCTCGCT
GTACGCAACACGGTTGATCCTCGGTGGCTGCGAAGCCGGACTCTTCCCGT
GTCTAAACCTGTATTTGACCATGGTGTATCGTCGAGAAGAGCAAGCAAAG
CGCGTCTCATACCTGATGAGCTGCGCCGCCATCTCCGGTGCCGTGGGAGG
TCTACTCGCATATGCATTGTTGCACATGGACGGTGTAGGCGGCAAAGCCG
GCTGGAGATGGGTCTACATCATCGAAGGACTCTTCAGTCTAGTGTGCGCC
ATCCTCATCTGGTTCGGTCTTCCCAACGACCCCAGCAACGCCTACTTCCT
CACCGCCGAAGAGAAATACATGATGCGCGTGCGCAACGAACAACGCCGGA
AGTACATGGGCAGTGAGCACTTCAGCTGGGAGGAGATGCGCATTGCTCTT
CGTGATCCCAAGCTCATGTTCTCTGCCCTCACGCAGTTCTGTCAGGATAT
TCTCCTCTACGGATTCAGTACTTTCCTTCCTACTATCTTGGGGAGTCTGG
GGTATAATAGTCTCATGAGTAATGTGCTCACGGTACCGGTGTATATCTGG
GCTGCGATCGTGTTTATTGCTGTCGCGTTTTGCGCGGATCGCTTTGGGAG
GTTTTCTATCTTCATCCTAGCCACCAACATCTTCGGCATCGTCGGCTACA
TCCTCCTCCTGACTGTGTCCAACGACGCCGTCAAATACTTCGCTACTTAC
CTCTGCGGTGTGGCTGTCTACACCGGCGTCGGACTGAACGTCGCCTGGTT
GAACGTCAACGTGGCGCCTCAGTACCGTCGTGCACTCGCCATCGGTCTCC
AGCAGACAGTGGGTAACTGCGCCGGTATTGTAGCGGGCCAGGTCTATCGC
ACGTCGCCGTATGTACTAGGGAATGCCTTCTCGTTGGGGGCATTGGTGGT
ATCGCAGGTAATTGTCGCGCTTCATGCGGTGTATCTGAGACGGGAGAATA
AGGTGAAAGAGGAGATTCTGGCGGGCGAAAAGGAGGATACGCGAAGAGTG
AAGACAGGTGATGGCGAGGTGGAGTTCAGATACCATACTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007657-T1.utr5p1 | KJC3_007657-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3053321..3055101 + |
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