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KJC3_007658-T1, KJC3_007658-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007658-T1
Unique NameKJC3_007658-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3054980..3056322-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007658-T1 ID=KJC3_007658-T1|Name=KJC3_007658-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1343bp|location=Sequence derived from alignment at ch5:3054980..3056322- (Aspergillus niger KJC3)
CAGGAATCAAAGAACTTTCATCGAGATCTCTTCAAAACTACCAACCACTT
AACCACCGAAAAGCCTCGTAATCATCTCATCAAGATGACATTCCCACTGA
AGAACGTGGTAATCGTCGGGGTAAGTGAACTTAGACCATCCTCCCCTACC
CTTCACATATTAACATACAATCCCTCTTAGGCCGCAGGAAACCTGGGCTC
CCATGTCCTCAAGGCCTTCCTTTCATCTAACGCATTCAACATCACTGTCC
TCTCCAGAGACTCATCTACCAGCACCTTCCCCGACGGCCTCAAAGTCATC
AAGTCAGACTACAGCCATGACTCACTCGTCTCTGCCTTCAAGGGCCAAGA
TGCCGTGATCAGCATTGTAGGCAATGGCGGCTTTTCCAACCAGCAGAAAC
TCATCGACGCTGCCCTCGCCGCAGGAGTCAAACGATTCATCCCCAGCGAA
TTCGGTAACAACACCGCAGATGAACGTGTCCGGGCACTTGCACCGCTTCT
TGATGGCAAGAAAGCCATTGTCGATTATCTTAAGGAGAAACAGGATCGGC
TGAGTTGGACTGCACTCATAACGGGGCCGTTCTTTGATTGGGTAAGTGAC
TCTACGACAGACTCCTATAGTACCTATTCCTTGCTATGTATTACCTAAGA
ATCAAAGCTAATATATTTGACTCAACAGGGTCTCCAAACCGGCTTCCTGG
GCTTCAACCTCCAATCGCACGAAGCAACCATCTACGACGACGGCACCATC
CCGGCCTCAGTCAGCACCCTCGCTCAGATCGGCCATTCTCTAGTCGCTGT
CTTGCAGAACCCAGAGGTTACTGAGAATCAATACGTCTACGTCGAGTCAT
TCACCGTCACGCAAAAGCAGATTCTCGGGGCTCTCGAAAAAGCCACCGGC
AAGGAATGGAAGGTCACTGATGTTGACTTTGAACCGCTTATTCAAGAGAG
TACTGAGCGGTTCAAGGGTGGTGATTTCTCGGCCGTGCGCGTTCTGCTCT
TAGCGTCTGCGTTGGCGAGGTTACCGGATGGGCCGTATGGAAGTTGGGAG
CAGGTGTCGGGCGGGTCGTGGAATAAGAGATTGGGGATTGAGTATGAGGA
TTTGGATGAGGTTGTGGGGTCGCTCGTTAATTAGGATGTCTTGAGCGGCT
TTCAGGGTATATTGTTGCAGGACACATATTTTGGAACGAGCAATAAATTA
TTGATAAATGAAACAGACATATTAAGTATGGTATCTGAACTCCACCTCGC
CATCACCTGTCTTCACTCTTCGCGTATCCTCCTTTTCGCCCGCCAGAATC
TCCTCTTTCACCTTATTCTCCCGTCTCAGATACACCGCATGAA
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Coding sequence (CDS) from alignment at ch5:3054980..3056322-

>KJC3_007658-T1 ID=KJC3_007658-T1|Name=KJC3_007658-T1|organism=Aspergillus niger KJC3|type=CDS|length=2709bp|location=Sequence derived from alignment at ch5:3054980..3056322- (Aspergillus niger KJC3)
GGTCTCCAAACCGGCTTCCTGGGCTTCAACCTCCAATCGCACGAAGCAAC
CATCTACGACGACGGCACCATCCCGGCCTCAGTCAGCACCCTCGCTCAGA
TCGGCCATTCTCTAGTCGCTGTCTTGCAGAACCCAGAGGTTACTGAGAAT
CAATACGTCTACGTCGAGTCATTCACCGTCACGCAAAAGCAGATTCTCGG
GGCTCTCGAAAAAGCCACCGGCAAGGAATGGAAGGTCACTGATGTTGACT
TTGAACCGCTTATTCAAGAGAGTACTGAGCGGTTCAAGGGTGGTGATTTC
TCGGCCGTGCGCGTTCTGCTCTTAGCGTCTGCGTTGGCGAGGTTACCGGA
TGGGCCGTATGGAAGTTGGGAGCAGGTGTCGGGCGGGTCGTGGAATAAGA
GATTGGGGATTGAGTATGAGGATTTGGATGAGGTTGTGGGGTCGCTCGTT
AATTAGGCCGCAGGAAACCTGGGCTCCCATGTCCTCAAGGCCTTCCTTTC
ATCTAACGCATTCAACATCACTGTCCTCTCCAGAGACTCATCTACCAGCA
CCTTCCCCGACGGCCTCAAAGTCATCAAGTCAGACTACAGCCATGACTCA
CTCGTCTCTGCCTTCAAGGGCCAAGATGCCGTGATCAGCATTGTAGGCAA
TGGCGGCTTTTCCAACCAGCAGAAACTCATCGACGCTGCCCTCGCCGCAG
GAGTCAAACGATTCATCCCCAGCGAATTCGGTAACAACACCGCAGATGAA
CGTGTCCGGGCACTTGCACCGCTTCTTGATGGCAAGAAAGCCATTGTCGA
TTATCTTAAGGAGAAACAGGATCGGCTGAGTTGGACTGCACTCATAACGG
GGCCGTTCTTTGATTGGATGACATTCCCACTGAAGAACGTGGTAATCGTC
GGGGGTCTCCAAACCGGCTTCCTGGGCTTCAACCTCCAATCGCACGAAGC
AACCATCTACGACGACGGCACCATCCCGGCCTCAGTCAGCACCCTCGCTC
AGATCGGCCATTCTCTAGTCGCTGTCTTGCAGAACCCAGAGGTTACTGAG
AATCAATACGTCTACGTCGAGTCATTCACCGTCACGCAAAAGCAGATTCT
CGGGGCTCTCGAAAAAGCCACCGGCAAGGAATGGAAGGTCACTGATGTTG
ACTTTGAACCGCTTATTCAAGAGAGTACTGAGCGGTTCAAGGGTGGTGAT
TTCTCGGCCGTGCGCGTTCTGCTCTTAGCGTCTGCGTTGGCGAGGTTACC
GGATGGGCCGTATGGAAGTTGGGAGCAGGTGTCGGGCGGGTCGTGGAATA
AGAGATTGGGGATTGAGTATGAGGATTTGGATGAGGTTGTGGGGTCGCTC
GTTAATTAGGCCGCAGGAAACCTGGGCTCCCATGTCCTCAAGGCCTTCCT
TTCATCTAACGCATTCAACATCACTGTCCTCTCCAGAGACTCATCTACCA
GCACCTTCCCCGACGGCCTCAAAGTCATCAAGTCAGACTACAGCCATGAC
TCACTCGTCTCTGCCTTCAAGGGCCAAGATGCCGTGATCAGCATTGTAGG
CAATGGCGGCTTTTCCAACCAGCAGAAACTCATCGACGCTGCCCTCGCCG
CAGGAGTCAAACGATTCATCCCCAGCGAATTCGGTAACAACACCGCAGAT
GAACGTGTCCGGGCACTTGCACCGCTTCTTGATGGCAAGAAAGCCATTGT
CGATTATCTTAAGGAGAAACAGGATCGGCTGAGTTGGACTGCACTCATAA
CGGGGCCGTTCTTTGATTGGATGACATTCCCACTGAAGAACGTGGTAATC
GTCGGGGGTCTCCAAACCGGCTTCCTGGGCTTCAACCTCCAATCGCACGA
AGCAACCATCTACGACGACGGCACCATCCCGGCCTCAGTCAGCACCCTCG
CTCAGATCGGCCATTCTCTAGTCGCTGTCTTGCAGAACCCAGAGGTTACT
GAGAATCAATACGTCTACGTCGAGTCATTCACCGTCACGCAAAAGCAGAT
TCTCGGGGCTCTCGAAAAAGCCACCGGCAAGGAATGGAAGGTCACTGATG
TTGACTTTGAACCGCTTATTCAAGAGAGTACTGAGCGGTTCAAGGGTGGT
GATTTCTCGGCCGTGCGCGTTCTGCTCTTAGCGTCTGCGTTGGCGAGGTT
ACCGGATGGGCCGTATGGAAGTTGGGAGCAGGTGTCGGGCGGGTCGTGGA
ATAAGAGATTGGGGATTGAGTATGAGGATTTGGATGAGGTTGTGGGGTCG
CTCGTTAATTAGGCCGCAGGAAACCTGGGCTCCCATGTCCTCAAGGCCTT
CCTTTCATCTAACGCATTCAACATCACTGTCCTCTCCAGAGACTCATCTA
CCAGCACCTTCCCCGACGGCCTCAAAGTCATCAAGTCAGACTACAGCCAT
GACTCACTCGTCTCTGCCTTCAAGGGCCAAGATGCCGTGATCAGCATTGT
AGGCAATGGCGGCTTTTCCAACCAGCAGAAACTCATCGACGCTGCCCTCG
CCGCAGGAGTCAAACGATTCATCCCCAGCGAATTCGGTAACAACACCGCA
GATGAACGTGTCCGGGCACTTGCACCGCTTCTTGATGGCAAGAAAGCCAT
TGTCGATTATCTTAAGGAGAAACAGGATCGGCTGAGTTGGACTGCACTCA
TAACGGGGCCGTTCTTTGATTGGATGACATTCCCACTGAAGAACGTGGTA
ATCGTCGGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007658KJC3_007658Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007658-T1KJC3_007658-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007658-T1.cdsKJC3_007658-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007658-T1.utr3p2KJC3_007658-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_007658-T1.utr3p1KJC3_007658-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007658-T1.exon4KJC3_007658-T1.exon4Aspergillus niger KJC3exon
KJC3_007658-T1.exon3KJC3_007658-T1.exon3Aspergillus niger KJC3exon
KJC3_007658-T1.exon2KJC3_007658-T1.exon2Aspergillus niger KJC3exon
KJC3_007658-T1.exon1KJC3_007658-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007658-T1.utr5p1KJC3_007658-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3054980..3056322 -
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