You are here

Home

KJC3_007662-T1, KJC3_007662-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007662-T1
Unique NameKJC3_007662-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3063117..3064379+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007662-T1 ID=KJC3_007662-T1|Name=KJC3_007662-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1263bp|location=Sequence derived from alignment at ch5:3063117..3064379+ (Aspergillus niger KJC3)
ATGGGGCAGGTTGTCGGCGCGATTGTCTTCCCTCCGTGGTCCGAGTGCTT
TGGACGCAAAAAGCTATATTTTATCAGCAGCACCGGTAGTGCGGTGTGTT
GCCTAATAATTGGGCTTGTTCATTCATTAGTCGCCGTGGTCATCTGTCGC
ATCGTCGGTGGCTTCTTGAGTGCTATTCCATACACTGTTGGCAGCGGCAG
CAATGAGGACATGTTCAACTCGCGATCTCGCATCTGGACCACTTTCCTCT
GGACCATTGCCTCGAACGTCGGTCTTCTAATCGGTCCAATCATCAGCATC
CTTGTTGTTGAAATCCTACACTGGTACGTCTTCTGATCCGTTTCGCGAGA
CAAGCTCTGACTGAGTAGGCGCTGGGTGTTTTACATATATACGATCATCC
TGGCTGTCATGAGCGCGTTCTTCCTGCTCATCCGGGAATCACGGCCCGCC
CTGCTCCTGGCCAAAGAGGTCTCACGCATTCGCCACGAAACGGGCCACGA
CAGCCTACAGCCTCTTAATCACGATCACTCCCCTGACCTCCGCACCTTCG
TCAAGGTCTCGCTCTTCCGACCCCTGCAGCTCTTCTTCGGTGAGCTTCTC
ATCTTCACGATGGCCATGATGATCGCGTTCTCCTTCGCGTTGGTCTATAT
CTTCACCGAGGCACTCCAGCCCATCTACGAGAGCATGGGTTTCACTCCAT
CAGCTGCAGCTCTTCCTTTCCTCGCCGTGGGTGTTGGTGTTTGTTTCAGC
ACTCTCACTCGCATCCTCGACTTTCGAATCATCGACGCCAAACACGCAGC
CTCCGAGCCCGTCAAACCAGAAGATAAACTGACCGGACTGGCCATTGGGG
CTCCTGCCTTTGCGATTGGGCTCTGGTGGTTCGCATGGACGATTCCCCCG
CAGGCAGAAAATATCCACTGGATTGTCCCTACGCTTTCCCTGGTGTTCAT
TGGATATGCGTTGAATGAATTCGACACCGTTCTATATGGCTATCTGGCCG
ATAGTTATCTGAGCTATTCAGCGAGTGGCACAGCGGCGGTGCAGTTGGTT
CGAGCAGGGATGTCGGGGGCATTTCCGCTCTTCACGCGGCAGATGTTTGA
CGGGCTGGGAGCGAATGTCGCAGCTTCATTGTTGGCGGCATTGGCAACAG
TGTTCTGTAGTGTGCCGTTATTGTTTGTGTTTTATGGGGAGCGGATCCGC
GCGAAGAGTCAGTTCGCGAAGCATAGTTTGGAGGTTCAGGAGCAATTTGT
CAAGCAGGGTTGA
back to top

Coding sequence (CDS) from alignment at ch5:3063117..3064379+

>KJC3_007662-T1 ID=KJC3_007662-T1|Name=KJC3_007662-T1|organism=Aspergillus niger KJC3|type=CDS|length=2436bp|location=Sequence derived from alignment at ch5:3063117..3064379+ (Aspergillus niger KJC3)
ATGGGGCAGGTTGTCGGCGCGATTGTCTTCCCTCCGTGGTCCGAGTGCTT
TGGACGCAAAAAGCTATATTTTATCAGCAGCACCGGTAGTGCGGTGTGTT
GCCTAATAATTGGGCTTGTTCATTCATTAGTCGCCGTGGTCATCTGTCGC
ATCGTCGGTGGCTTCTTGAGTGCTATTCCATACACTGTTGGCAGCGGCAG
CAATGAGGACATGTTCAACTCGCGATCTCGCATCTGGACCACTTTCCTCT
GGACCATTGCCTCGAACGTCGGTCTTCTAATCGGTCCAATCATCAGCATC
CTTGTTGTTGAAATCCTACACTGGCGCTGGGTGTTTTACATATATACGAT
CATCCTGGCTGTCATGAGCGCGTTCTTCCTGCTCATCCGGGAATCACGGC
CCGCCCTGCTCCTGGCCAAAGAGGTCTCACGCATTCGCCACGAAACGGGC
CACGACAGCCTACAGCCTCTTAATCACGATCACTCCCCTGACCTCCGCAC
CTTCGTCAAGGTCTCGCTCTTCCGACCCCTGCAGCTCTTCTTCGGTGAGC
TTCTCATCTTCACGATGGCCATGATGATCGCGTTCTCCTTCGCGTTGGTC
TATATCTTCACCGAGGCACTCCAGCCCATCTACGAGAGCATGGGTTTCAC
TCCATCAGCTGCAGCTCTTCCTTTCCTCGCCGTGGGTGTTGGTGTTTGTT
TCAGCACTCTCACTCGCATCCTCGACTTTCGAATCATCGACGCCAAACAC
GCAGCCTCCGAGCCCGTCAAACCAGAAGATAAACTGACCGGACTGGCCAT
TGGGGCTCCTGCCTTTGCGATTGGGCTCTGGTGGTTCGCATGGACGATTC
CCCCGCAGGCAGAAAATATCCACTGGATTGTCCCTACGCTTTCCCTGGTG
TTCATTGGATATGCGTTGAATGAATTCGACACCGTTCTATATGGCTATCT
GGCCGATAGTTATCTGAGCTATTCAGCGAGTGGCACAGCGGCGGTGCAGT
TGGTTCGAGCAGGGATGTCGGGGGCATTTCCGCTCTTCACGCGGCAGATG
TTTGACGGGCTGGGAGCGAATGTCGCAGCTTCATTGTTGGCGGCATTGGC
AACAGTGTTCTGTAGTGTGCCGTTATTGTTTGTGTTTTATGGGGAGCGGA
TCCGCGCGAAGAGTCAGTTCGCGAAGCATAGTTTGGAGGTTCAGGAGCAA
TTTGTCAAGCAGGGTTGAATGGGGCAGGTTGTCGGCGCGATTGTCTTCCC
TCCGTGGTCCGAGTGCTTTGGACGCAAAAAGCTATATTTTATCAGCAGCA
CCGGTAGTGCGGTGTGTTGCCTAATAATTGGGCTTGTTCATTCATTAGTC
GCCGTGGTCATCTGTCGCATCGTCGGTGGCTTCTTGAGTGCTATTCCATA
CACTGTTGGCAGCGGCAGCAATGAGGACATGTTCAACTCGCGATCTCGCA
TCTGGACCACTTTCCTCTGGACCATTGCCTCGAACGTCGGTCTTCTAATC
GGTCCAATCATCAGCATCCTTGTTGTTGAAATCCTACACTGGCGCTGGGT
GTTTTACATATATACGATCATCCTGGCTGTCATGAGCGCGTTCTTCCTGC
TCATCCGGGAATCACGGCCCGCCCTGCTCCTGGCCAAAGAGGTCTCACGC
ATTCGCCACGAAACGGGCCACGACAGCCTACAGCCTCTTAATCACGATCA
CTCCCCTGACCTCCGCACCTTCGTCAAGGTCTCGCTCTTCCGACCCCTGC
AGCTCTTCTTCGGTGAGCTTCTCATCTTCACGATGGCCATGATGATCGCG
TTCTCCTTCGCGTTGGTCTATATCTTCACCGAGGCACTCCAGCCCATCTA
CGAGAGCATGGGTTTCACTCCATCAGCTGCAGCTCTTCCTTTCCTCGCCG
TGGGTGTTGGTGTTTGTTTCAGCACTCTCACTCGCATCCTCGACTTTCGA
ATCATCGACGCCAAACACGCAGCCTCCGAGCCCGTCAAACCAGAAGATAA
ACTGACCGGACTGGCCATTGGGGCTCCTGCCTTTGCGATTGGGCTCTGGT
GGTTCGCATGGACGATTCCCCCGCAGGCAGAAAATATCCACTGGATTGTC
CCTACGCTTTCCCTGGTGTTCATTGGATATGCGTTGAATGAATTCGACAC
CGTTCTATATGGCTATCTGGCCGATAGTTATCTGAGCTATTCAGCGAGTG
GCACAGCGGCGGTGCAGTTGGTTCGAGCAGGGATGTCGGGGGCATTTCCG
CTCTTCACGCGGCAGATGTTTGACGGGCTGGGAGCGAATGTCGCAGCTTC
ATTGTTGGCGGCATTGGCAACAGTGTTCTGTAGTGTGCCGTTATTGTTTG
TGTTTTATGGGGAGCGGATCCGCGCGAAGAGTCAGTTCGCGAAGCATAGT
TTGGAGGTTCAGGAGCAATTTGTCAAGCAGGGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007662KJC3_007662Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007662-T1.exon1KJC3_007662-T1.exon1Aspergillus niger KJC3exon
KJC3_007662-T1.exon2KJC3_007662-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007662-T1.cdsKJC3_007662-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007662-T1KJC3_007662-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3063117..3064379 +
Powered by Drupal