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KJC3_007673-T1, KJC3_007673-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007673-T1
Unique NameKJC3_007673-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3080326..3081823-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007673-T1 ID=KJC3_007673-T1|Name=KJC3_007673-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1498bp|location=Sequence derived from alignment at ch5:3080326..3081823- (Aspergillus niger KJC3)
CTTATGAAAGCAAGTTATGCATTCACTAGGGATCCCCAACAACTCTCGGC
TCTCTGTTTGTCTCAAATGCGGGAAAGCAAGGAGTGAAAATATAATAACC
GGGTCCAGCAATAATTAATCCGCCCGGCGACGGCTGCGATGTCAAGAATA
TGCGCCTTAAAAGTGGTCTATCATAATGACCAGCAGGTACCATTCCGATG
TGCCGGACGGTCTGGTTGTTGCCGGAATATTTTATTGAAGTCGTCGCATA
CCATACTTTCACTGCCTACACATCGACCTGAACTTGGAGGATGCTGTCTA
TAAGAACGATAGCCAGAGCCAAGCTGTGGGGACGATGGATGACATGGGCC
GGACATAAGATCGGGGATAACGGTGGAGAGCGAAAAACGTCGTCGCAAAC
CAGTGCCTGCTCCTCCAACACACGAGTTTAGCATTCTCTGAGTGTCTGTC
TGAGCAGTGCGAGCTACCACTCATCTTGCACGTCGCATCTCTACGTGGAT
CAACCATGCGGGAAGCGGTAGGTGGACATGCGGCTGCTCACCGCGACTCC
ACATCACTGCCGCAGCAGATTGAGCTTGGGCTCGAGGATGTGTGGATTGG
TGTGACCGATCCGAAGGAGAGGCGCAGGCTGCAGAACAGGTTAAATCAGA
GGGCCCGAAGTAGGTTGGCAAACGAGTCTCTCCCAAGTGGGCTGGCTGAC
GATCCAAATAGGGCGCCGTCAGCACTTGGCTAAAGAGCTACCCAGAAGAT
CTGAGCGATATGATTCTCAGGCCTGGTCCACAACAGTATCGGCGCCCTAT
CAACTCGATTTACAATGCTTGGATGAACTCCGCATCTTTGGTCCGCTTGC
CGCAAAATCCCGCAGTACCCTGCAGCAACTAGAAGCTATGGTGCATGTTG
AGTTTGCACTTGGCTCACCACAGGCCGATTTGCGTTTGGGCGTAACTCGG
TTGAACATTTTGCGGGCATTGTACACCAATGTTGACATTTTAGGTTATGA
TGCCAAAGATATGGCTGCCGATGAGGTGCTGTCAATGTTCGCCATGATTG
GGCCACGATGTCTGGCAACAGCCGGTCGGGAGGCTGTCCTGCCTCCTGCA
TTGCAGCCTACAGAGATTCAACGCACTGTACCCCATCATCCCTGGCTCGA
CCTCATCCCCATTCCCGGGATGCGCGACAACCTCATTCTGATGGAAGATC
TGATGGATGATCGCCAATTGTGTCGGGATATGTGCGGCTACCGCTCTCAG
GTACCTCGGTCGGGGCATAGACGCCCTACAGGGATGGGAGAAACAGGAGT
GATTGTGTGGAAAGATCCCTGGGATCCTGCTGGGTGGGAGATCACCGAGA
CCTTCTTCCAGCTGTGGGGGTGGTCCGTCAAGGATTGCTGGGGTTTGTTT
AGTTCGACCAATGCATGGCGGATGCGCCGGAGAGAGAGACCACTCTTTGC
AATACGTTCTACCGATAGCTATTAGTGGAGTGGGAATGCATCTAGTAC
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Coding sequence (CDS) from alignment at ch5:3080326..3081823-

>KJC3_007673-T1 ID=KJC3_007673-T1|Name=KJC3_007673-T1|organism=Aspergillus niger KJC3|type=CDS|length=1836bp|location=Sequence derived from alignment at ch5:3080326..3081823- (Aspergillus niger KJC3)
GGCGCCGTCAGCACTTGGCTAAAGAGCTACCCAGAAGATCTGAGCGATAT
GATTCTCAGGCCTGGTCCACAACAGTATCGGCGCCCTATCAACTCGATTT
ACAATGCTTGGATGAACTCCGCATCTTTGGTCCGCTTGCCGCAAAATCCC
GCAGTACCCTGCAGCAACTAGAAGCTATGGTGCATGTTGAGTTTGCACTT
GGCTCACCACAGGCCGATTTGCGTTTGGGCGTAACTCGGTTGAACATTTT
GCGGGCATTGTACACCAATGTTGACATTTTAGGTTATGATGCCAAAGATA
TGGCTGCCGATGAGGTGCTGTCAATGTTCGCCATGATTGGGCCACGATGT
CTGGCAACAGCCGGTCGGGAGGCTGTCCTGCCTCCTGCATTGCAGCCTAC
AGAGATTCAACGCACTGTACCCCATCATCCCTGGCTCGACCTCATCCCCA
TTCCCGGGATGCGCGACAACCTCATTCTGATGGAAGATCTGATGGATGAT
CGCCAATTGTGTCGGGATATGTGCGGCTACCGCTCTCAGGTACCTCGGTC
GGGGCATAGACGCCCTACAGGGATGGGAGAAACAGGAGTGATTGTGTGGA
AAGATCCCTGGGATCCTGCTGGGTGGGAGATCACCGAGACCTTCTTCCAG
CTGTGGGGGTGGTCCGTCAAGGATTGCTGGGGTTTGTTTAGTTCGACCAA
TGCATGGCGGATGCGCCGGAGAGAGAGACCACTCTTTGCAATACGTTCTA
CCGATAGCTATTAGATGCGGGAAGCGGTAGGTGGACATGCGGCTGCTCAC
CGCGACTCCACATCACTGCCGCAGCAGATTGAGCTTGGGCTCGAGGATGT
GTGGATTGGTGTGACCGATCCGAAGGAGAGGCGCAGGCTGCAGAACAGGT
TAAATCAGAGGGCCCGAAGGCGCCGTCAGCACTTGGCTAAAGAGCTACCC
AGAAGATCTGAGCGATATGATTCTCAGGCCTGGTCCACAACAGTATCGGC
GCCCTATCAACTCGATTTACAATGCTTGGATGAACTCCGCATCTTTGGTC
CGCTTGCCGCAAAATCCCGCAGTACCCTGCAGCAACTAGAAGCTATGGTG
CATGTTGAGTTTGCACTTGGCTCACCACAGGCCGATTTGCGTTTGGGCGT
AACTCGGTTGAACATTTTGCGGGCATTGTACACCAATGTTGACATTTTAG
GTTATGATGCCAAAGATATGGCTGCCGATGAGGTGCTGTCAATGTTCGCC
ATGATTGGGCCACGATGTCTGGCAACAGCCGGTCGGGAGGCTGTCCTGCC
TCCTGCATTGCAGCCTACAGAGATTCAACGCACTGTACCCCATCATCCCT
GGCTCGACCTCATCCCCATTCCCGGGATGCGCGACAACCTCATTCTGATG
GAAGATCTGATGGATGATCGCCAATTGTGTCGGGATATGTGCGGCTACCG
CTCTCAGGTACCTCGGTCGGGGCATAGACGCCCTACAGGGATGGGAGAAA
CAGGAGTGATTGTGTGGAAAGATCCCTGGGATCCTGCTGGGTGGGAGATC
ACCGAGACCTTCTTCCAGCTGTGGGGGTGGTCCGTCAAGGATTGCTGGGG
TTTGTTTAGTTCGACCAATGCATGGCGGATGCGCCGGAGAGAGAGACCAC
TCTTTGCAATACGTTCTACCGATAGCTATTAGATGCGGGAAGCGGTAGGT
GGACATGCGGCTGCTCACCGCGACTCCACATCACTGCCGCAGCAGATTGA
GCTTGGGCTCGAGGATGTGTGGATTGGTGTGACCGATCCGAAGGAGAGGC
GCAGGCTGCAGAACAGGTTAAATCAGAGGGCCCGAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007673KJC3_007673Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007673-T1KJC3_007673-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007673-T1.cdsKJC3_007673-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007673-T1.utr3p1KJC3_007673-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007673-T1.exon2KJC3_007673-T1.exon2Aspergillus niger KJC3exon
KJC3_007673-T1.exon1KJC3_007673-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007673-T1.utr5p1KJC3_007673-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021833
DBxrefPFAM:PF11905
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3080326..3081823 -
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