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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3092058..3094331- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007677-T1 ID=KJC3_007677-T1|Name=KJC3_007677-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2274bp|location=Sequence derived from alignment at ch5:3092058..3094331- (Aspergillus niger KJC3)
CAGGCAGGCACAATACAGCGCGTATACTTTCCATAATCCTACCACCTCCC
AAGCTACCTAGTCGCAATGGTGGCTACCGAGTGCGAATTTCGCAAAAGCA
CCTCCCAGAGTAATGACAGGAAGGTATTTAGACAGGCGTAGCTCCTGGGA
ATCCGGCGCCATCAATGATAGTACGTATGCCAATTGCATTTCCATTTTTG
CCACCCCAAACACTCATTCTGAACCTACCAGAAAGAGAAATGGCCCGGTG
CGATTTGACCGACCCTGCGGCACGGCCCCCTTCCACGTCTCCTACAACTG
TCGCGAGCAACATTGCGGCAGTGGCGAACCCAACAGAGGTCGACTGGGAT
GGTGACGCTGATCCTTCAAACCCCATGAACTGGAGCTTCTGGTATCGATG
GTGCCACATCGGCGTGATATCGCTCCTCACGTTCGTCACGTAAGTATGAG
CTTCTCTATATGCTGCCAGTTCACGCGCCACCCGGGTCCCCACCGACTAT
TGCATTGAAGGTCGCAGTTTGGTGGTTTCAATGTTAACCACTCTTGTACT
CCGATTATTTCTTCTGCGGCTAATAGTATCGCCCTAGGTCTTTGGGATCC
TCCATGCTGGCCCCTGCAGTCCCTGATGTTATGAGGTCACTAGGCTCCGA
CAACGCGGAGTTGGAGTCATTTGTAGTATCAATATATGTCATTGGATATG
CTTTAGGCCCGCTTATCGCTGCCCCCATGTCAGAGATATATGGGCGTAGC
ATAGTTTATAACGTGTCGAACGTGCTCTTCCTCGGTGCGACAATTGGATG
CGCACTGAGTACTAATGTGGGAATGTTTCTTGCCTTCCGGTTAATCTCCG
GCTGTGCTGGAGTGACACCACTCGCCCTGGGAGGGGGCTCAATTGGGGAC
CTAATGGCTCCCGAGAAAATGGGGACTGCGATGGCAATTTGGGGACTCGG
ATCTCTGGTGGCTCCGGTAGAAACTTCCTTGATATAGAACATCTTGTTTG
CCATGTAACTGACCTAAGTTCTGATGGATTGCAGGTTTTCGCTCCTATCG
CTGGAGGGTATCTCAGTGAAGATGTTGGTTGGAGATGGATCTTCTGGGTC
ATAACTATTCCGGTAAGGGGTGTCTATATATGTGAATAGCTCCAGGACTG
ATCAAACACTGAACTCGTTTGGGTAAATGTAGATGGCTGTTTTAACGATA
TTGTCAATCGTGACCCTTCGTGAAACGTATGCCCCCATACTGCTGGAACG
AAAAGCACGGCGCCTACGAAGAGAGACGGGAGATCGTGATCTCAGGTCAC
GTTCAGCTACACCGAAATCGCAACATGAGGTTTTTTTTTATGCTCTTGTG
CGCCCTTTAAAAATGCTCCTGACTTCCACGGTTGTCATGATGCTTGCATT
TGACGTGGCTGTAGTCTATGGATACCAATACCTGGTTTTTACCACACTGT
CATACATTTTCCAAGATGTGTACCATCTCTCGACAGGCCTGTCCGGGCTG
GTTTATCTTGGGGATGGGATAGGCACACTATTAGGTATGATGAAACCTTG
ATTCCTTCCTACGCCAAGCATTCAGTTCTGCTACCCCTTCTCTCCACCGG
TTCACCCCAGCCTCTCAATTCTTGGTGCACTTGTAGACCCCCCTGTGCAC
CCTGTCGTATTGCAGACAAGGAACCATTTTGAGATTAATATTGATCACCC
CTGAACCAGGGATATTCTCCATCGGTTACGCATCTGATAAGGTTGCTGAG
AGAAAGAAAGGAAGACTAAGTGCACCAGACGAAACATTGCCACCAGAAAG
CTGGTTATGGCCCATGATACCAGCTAGCCTTCTGACACCAATCGGTCTCC
TGTGGTACGGCTGGTCACTACAGGCTGGGTTATTTCCAGTTGTGCCTTTG
GTGGGTCTCGGCGTGTTTGGCTTCGGGATGATGGGCATCTTTCAGCCTGT
GCAGATCTATCTGGTAAATGCATTCCCAATACATTCGGCATCAGCCCTCG
CAGCGAGCAACTTGCTGAGAAGTTTAGTGGGTGCACTGTTGCCACTTGGA
GGGCACCGAATGTATGACACCATGGGGCTTGGATGGGGGAATAGTCTACT
GGCCTTTATTGCGTTGGCAATGGCGCCGGTCCCGATTATCTTGATGAAGT
TTGGGGAACGAATGAGGCTGAGCGATAGAAATATTGAAAATGGAAGGACT
CAAGGTTTTACGAGCTGAATACTACGGAGGCGTGAGTTTGGAATGTAAAT
TGACTGGAGATCTAATCTAGGAAA back to topCoding sequence (CDS) from alignment at ch5:3092058..3094331- >KJC3_007677-T1 ID=KJC3_007677-T1|Name=KJC3_007677-T1|organism=Aspergillus niger KJC3|type=CDS|length=7965bp|location=Sequence derived from alignment at ch5:3092058..3094331- (Aspergillus niger KJC3)
GGATATTCTCCATCGGTTACGCATCTGATAAGGTTGCTGAGAGAAAGAAA
GGAAGACTAAGTGCACCAGACGAAACATTGCCACCAGAAAGCTGGTTATG
GCCCATGATACCAGCTAGCCTTCTGACACCAATCGGTCTCCTGTGGTACG
GCTGGTCACTACAGGCTGGGTTATTTCCAGTTGTGCCTTTGGTGGGTCTC
GGCGTGTTTGGCTTCGGGATGATGGGCATCTTTCAGCCTGTGCAGATCTA
TCTGGTAAATGCATTCCCAATACATTCGGCATCAGCCCTCGCAGCGAGCA
ACTTGCTGAGAAGTTTAGTGGGTGCACTGTTGCCACTTGGAGGGCACCGA
ATGTATGACACCATGGGGCTTGGATGGGGGAATAGTCTACTGGCCTTTAT
TGCGTTGGCAATGGCGCCGGTCCCGATTATCTTGATGAAGTTTGGGGAAC
GAATGAGGCTGAGCGATAGAAATATTGAAAATGGAAGGACTCAAGGTTTT
ACGAGCTGAATGGCTGTTTTAACGATATTGTCAATCGTGACCCTTCGTGA
AACGTATGCCCCCATACTGCTGGAACGAAAAGCACGGCGCCTACGAAGAG
AGACGGGAGATCGTGATCTCAGGTCACGTTCAGCTACACCGAAATCGCAA
CATGAGGTTTTTTTTTATGCTCTTGTGCGCCCTTTAAAAATGCTCCTGAC
TTCCACGGTTGTCATGATGCTTGCATTTGACGTGGCTGTAGTCTATGGAT
ACCAATACCTGGTTTTTACCACACTGTCATACATTTTCCAAGATGTGTAC
CATCTCTCGACAGGCCTGTCCGGGCTGGTTTATCTTGGGGATGGGATAGG
CACACTATTAGGTTTTCGCTCCTATCGCTGGAGGGTATCTCAGTGAAGAT
GTTGGTTGGAGATGGATCTTCTGGGTCATAACTATTCCGGTCTTTGGGAT
CCTCCATGCTGGCCCCTGCAGTCCCTGATGTTATGAGGTCACTAGGCTCC
GACAACGCGGAGTTGGAGTCATTTGTAGTATCAATATATGTCATTGGATA
TGCTTTAGGCCCGCTTATCGCTGCCCCCATGTCAGAGATATATGGGCGTA
GCATAGTTTATAACGTGTCGAACGTGCTCTTCCTCGGTGCGACAATTGGA
TGCGCACTGAGTACTAATGTGGGAATGTTTCTTGCCTTCCGGTTAATCTC
CGGCTGTGCTGGAGTGACACCACTCGCCCTGGGAGGGGGCTCAATTGGGG
ACCTAATGGCTCCCGAGAAAATGGGGACTGCGATGGCAATTTGGGGACTC
GGATCTCTGGTGGCTCCGATGATAGTACGTATGCCAATTGCATTTCCATT
TTTGCCACCCCAAACACTCATTCTGAACCTACCAGAAAGAGAAATGGCCC
GGTGCGATTTGACCGACCCTGCGGCACGGCCCCCTTCCACGTCTCCTACA
ACTGTCGCGAGCAACATTGCGGCAGTGGCGAACCCAACAGAGGTCGACTG
GGATGGTGACGCTGATCCTTCAAACCCCATGAACTGGAGCTTCTGGTATC
GATGGTGCCACATCGGCGTGATATCGCTCCTCACGTTCGTCACGGATATT
CTCCATCGGTTACGCATCTGATAAGGTTGCTGAGAGAAAGAAAGGAAGAC
TAAGTGCACCAGACGAAACATTGCCACCAGAAAGCTGGTTATGGCCCATG
ATACCAGCTAGCCTTCTGACACCAATCGGTCTCCTGTGGTACGGCTGGTC
ACTACAGGCTGGGTTATTTCCAGTTGTGCCTTTGGTGGGTCTCGGCGTGT
TTGGCTTCGGGATGATGGGCATCTTTCAGCCTGTGCAGATCTATCTGGTA
AATGCATTCCCAATACATTCGGCATCAGCCCTCGCAGCGAGCAACTTGCT
GAGAAGTTTAGTGGGTGCACTGTTGCCACTTGGAGGGCACCGAATGTATG
ACACCATGGGGCTTGGATGGGGGAATAGTCTACTGGCCTTTATTGCGTTG
GCAATGGCGCCGGTCCCGATTATCTTGATGAAGTTTGGGGAACGAATGAG
GCTGAGCGATAGAAATATTGAAAATGGAAGGACTCAAGGTTTTACGAGCT
GAATGGCTGTTTTAACGATATTGTCAATCGTGACCCTTCGTGAAACGTAT
GCCCCCATACTGCTGGAACGAAAAGCACGGCGCCTACGAAGAGAGACGGG
AGATCGTGATCTCAGGTCACGTTCAGCTACACCGAAATCGCAACATGAGG
TTTTTTTTTATGCTCTTGTGCGCCCTTTAAAAATGCTCCTGACTTCCACG
GTTGTCATGATGCTTGCATTTGACGTGGCTGTAGTCTATGGATACCAATA
CCTGGTTTTTACCACACTGTCATACATTTTCCAAGATGTGTACCATCTCT
CGACAGGCCTGTCCGGGCTGGTTTATCTTGGGGATGGGATAGGCACACTA
TTAGGTTTTCGCTCCTATCGCTGGAGGGTATCTCAGTGAAGATGTTGGTT
GGAGATGGATCTTCTGGGTCATAACTATTCCGGTCTTTGGGATCCTCCAT
GCTGGCCCCTGCAGTCCCTGATGTTATGAGGTCACTAGGCTCCGACAACG
CGGAGTTGGAGTCATTTGTAGTATCAATATATGTCATTGGATATGCTTTA
GGCCCGCTTATCGCTGCCCCCATGTCAGAGATATATGGGCGTAGCATAGT
TTATAACGTGTCGAACGTGCTCTTCCTCGGTGCGACAATTGGATGCGCAC
TGAGTACTAATGTGGGAATGTTTCTTGCCTTCCGGTTAATCTCCGGCTGT
GCTGGAGTGACACCACTCGCCCTGGGAGGGGGCTCAATTGGGGACCTAAT
GGCTCCCGAGAAAATGGGGACTGCGATGGCAATTTGGGGACTCGGATCTC
TGGTGGCTCCGATGATAGTACGTATGCCAATTGCATTTCCATTTTTGCCA
CCCCAAACACTCATTCTGAACCTACCAGAAAGAGAAATGGCCCGGTGCGA
TTTGACCGACCCTGCGGCACGGCCCCCTTCCACGTCTCCTACAACTGTCG
CGAGCAACATTGCGGCAGTGGCGAACCCAACAGAGGTCGACTGGGATGGT
GACGCTGATCCTTCAAACCCCATGAACTGGAGCTTCTGGTATCGATGGTG
CCACATCGGCGTGATATCGCTCCTCACGTTCGTCACGGATATTCTCCATC
GGTTACGCATCTGATAAGGTTGCTGAGAGAAAGAAAGGAAGACTAAGTGC
ACCAGACGAAACATTGCCACCAGAAAGCTGGTTATGGCCCATGATACCAG
CTAGCCTTCTGACACCAATCGGTCTCCTGTGGTACGGCTGGTCACTACAG
GCTGGGTTATTTCCAGTTGTGCCTTTGGTGGGTCTCGGCGTGTTTGGCTT
CGGGATGATGGGCATCTTTCAGCCTGTGCAGATCTATCTGGTAAATGCAT
TCCCAATACATTCGGCATCAGCCCTCGCAGCGAGCAACTTGCTGAGAAGT
TTAGTGGGTGCACTGTTGCCACTTGGAGGGCACCGAATGTATGACACCAT
GGGGCTTGGATGGGGGAATAGTCTACTGGCCTTTATTGCGTTGGCAATGG
CGCCGGTCCCGATTATCTTGATGAAGTTTGGGGAACGAATGAGGCTGAGC
GATAGAAATATTGAAAATGGAAGGACTCAAGGTTTTACGAGCTGAATGGC
TGTTTTAACGATATTGTCAATCGTGACCCTTCGTGAAACGTATGCCCCCA
TACTGCTGGAACGAAAAGCACGGCGCCTACGAAGAGAGACGGGAGATCGT
GATCTCAGGTCACGTTCAGCTACACCGAAATCGCAACATGAGGTTTTTTT
TTATGCTCTTGTGCGCCCTTTAAAAATGCTCCTGACTTCCACGGTTGTCA
TGATGCTTGCATTTGACGTGGCTGTAGTCTATGGATACCAATACCTGGTT
TTTACCACACTGTCATACATTTTCCAAGATGTGTACCATCTCTCGACAGG
CCTGTCCGGGCTGGTTTATCTTGGGGATGGGATAGGCACACTATTAGGTT
TTCGCTCCTATCGCTGGAGGGTATCTCAGTGAAGATGTTGGTTGGAGATG
GATCTTCTGGGTCATAACTATTCCGGTCTTTGGGATCCTCCATGCTGGCC
CCTGCAGTCCCTGATGTTATGAGGTCACTAGGCTCCGACAACGCGGAGTT
GGAGTCATTTGTAGTATCAATATATGTCATTGGATATGCTTTAGGCCCGC
TTATCGCTGCCCCCATGTCAGAGATATATGGGCGTAGCATAGTTTATAAC
GTGTCGAACGTGCTCTTCCTCGGTGCGACAATTGGATGCGCACTGAGTAC
TAATGTGGGAATGTTTCTTGCCTTCCGGTTAATCTCCGGCTGTGCTGGAG
TGACACCACTCGCCCTGGGAGGGGGCTCAATTGGGGACCTAATGGCTCCC
GAGAAAATGGGGACTGCGATGGCAATTTGGGGACTCGGATCTCTGGTGGC
TCCGATGATAGTACGTATGCCAATTGCATTTCCATTTTTGCCACCCCAAA
CACTCATTCTGAACCTACCAGAAAGAGAAATGGCCCGGTGCGATTTGACC
GACCCTGCGGCACGGCCCCCTTCCACGTCTCCTACAACTGTCGCGAGCAA
CATTGCGGCAGTGGCGAACCCAACAGAGGTCGACTGGGATGGTGACGCTG
ATCCTTCAAACCCCATGAACTGGAGCTTCTGGTATCGATGGTGCCACATC
GGCGTGATATCGCTCCTCACGTTCGTCACGGATATTCTCCATCGGTTACG
CATCTGATAAGGTTGCTGAGAGAAAGAAAGGAAGACTAAGTGCACCAGAC
GAAACATTGCCACCAGAAAGCTGGTTATGGCCCATGATACCAGCTAGCCT
TCTGACACCAATCGGTCTCCTGTGGTACGGCTGGTCACTACAGGCTGGGT
TATTTCCAGTTGTGCCTTTGGTGGGTCTCGGCGTGTTTGGCTTCGGGATG
ATGGGCATCTTTCAGCCTGTGCAGATCTATCTGGTAAATGCATTCCCAAT
ACATTCGGCATCAGCCCTCGCAGCGAGCAACTTGCTGAGAAGTTTAGTGG
GTGCACTGTTGCCACTTGGAGGGCACCGAATGTATGACACCATGGGGCTT
GGATGGGGGAATAGTCTACTGGCCTTTATTGCGTTGGCAATGGCGCCGGT
CCCGATTATCTTGATGAAGTTTGGGGAACGAATGAGGCTGAGCGATAGAA
ATATTGAAAATGGAAGGACTCAAGGTTTTACGAGCTGAATGGCTGTTTTA
ACGATATTGTCAATCGTGACCCTTCGTGAAACGTATGCCCCCATACTGCT
GGAACGAAAAGCACGGCGCCTACGAAGAGAGACGGGAGATCGTGATCTCA
GGTCACGTTCAGCTACACCGAAATCGCAACATGAGGTTTTTTTTTATGCT
CTTGTGCGCCCTTTAAAAATGCTCCTGACTTCCACGGTTGTCATGATGCT
TGCATTTGACGTGGCTGTAGTCTATGGATACCAATACCTGGTTTTTACCA
CACTGTCATACATTTTCCAAGATGTGTACCATCTCTCGACAGGCCTGTCC
GGGCTGGTTTATCTTGGGGATGGGATAGGCACACTATTAGGTTTTCGCTC
CTATCGCTGGAGGGTATCTCAGTGAAGATGTTGGTTGGAGATGGATCTTC
TGGGTCATAACTATTCCGGTCTTTGGGATCCTCCATGCTGGCCCCTGCAG
TCCCTGATGTTATGAGGTCACTAGGCTCCGACAACGCGGAGTTGGAGTCA
TTTGTAGTATCAATATATGTCATTGGATATGCTTTAGGCCCGCTTATCGC
TGCCCCCATGTCAGAGATATATGGGCGTAGCATAGTTTATAACGTGTCGA
ACGTGCTCTTCCTCGGTGCGACAATTGGATGCGCACTGAGTACTAATGTG
GGAATGTTTCTTGCCTTCCGGTTAATCTCCGGCTGTGCTGGAGTGACACC
ACTCGCCCTGGGAGGGGGCTCAATTGGGGACCTAATGGCTCCCGAGAAAA
TGGGGACTGCGATGGCAATTTGGGGACTCGGATCTCTGGTGGCTCCGATG
ATAGTACGTATGCCAATTGCATTTCCATTTTTGCCACCCCAAACACTCAT
TCTGAACCTACCAGAAAGAGAAATGGCCCGGTGCGATTTGACCGACCCTG
CGGCACGGCCCCCTTCCACGTCTCCTACAACTGTCGCGAGCAACATTGCG
GCAGTGGCGAACCCAACAGAGGTCGACTGGGATGGTGACGCTGATCCTTC
AAACCCCATGAACTGGAGCTTCTGGTATCGATGGTGCCACATCGGCGTGA
TATCGCTCCTCACGTTCGTCACGGATATTCTCCATCGGTTACGCATCTGA
TAAGGTTGCTGAGAGAAAGAAAGGAAGACTAAGTGCACCAGACGAAACAT
TGCCACCAGAAAGCTGGTTATGGCCCATGATACCAGCTAGCCTTCTGACA
CCAATCGGTCTCCTGTGGTACGGCTGGTCACTACAGGCTGGGTTATTTCC
AGTTGTGCCTTTGGTGGGTCTCGGCGTGTTTGGCTTCGGGATGATGGGCA
TCTTTCAGCCTGTGCAGATCTATCTGGTAAATGCATTCCCAATACATTCG
GCATCAGCCCTCGCAGCGAGCAACTTGCTGAGAAGTTTAGTGGGTGCACT
GTTGCCACTTGGAGGGCACCGAATGTATGACACCATGGGGCTTGGATGGG
GGAATAGTCTACTGGCCTTTATTGCGTTGGCAATGGCGCCGGTCCCGATT
ATCTTGATGAAGTTTGGGGAACGAATGAGGCTGAGCGATAGAAATATTGA
AAATGGAAGGACTCAAGGTTTTACGAGCTGAATGGCTGTTTTAACGATAT
TGTCAATCGTGACCCTTCGTGAAACGTATGCCCCCATACTGCTGGAACGA
AAAGCACGGCGCCTACGAAGAGAGACGGGAGATCGTGATCTCAGGTCACG
TTCAGCTACACCGAAATCGCAACATGAGGTTTTTTTTTATGCTCTTGTGC
GCCCTTTAAAAATGCTCCTGACTTCCACGGTTGTCATGATGCTTGCATTT
GACGTGGCTGTAGTCTATGGATACCAATACCTGGTTTTTACCACACTGTC
ATACATTTTCCAAGATGTGTACCATCTCTCGACAGGCCTGTCCGGGCTGG
TTTATCTTGGGGATGGGATAGGCACACTATTAGGTTTTCGCTCCTATCGC
TGGAGGGTATCTCAGTGAAGATGTTGGTTGGAGATGGATCTTCTGGGTCA
TAACTATTCCGGTCTTTGGGATCCTCCATGCTGGCCCCTGCAGTCCCTGA
TGTTATGAGGTCACTAGGCTCCGACAACGCGGAGTTGGAGTCATTTGTAG
TATCAATATATGTCATTGGATATGCTTTAGGCCCGCTTATCGCTGCCCCC
ATGTCAGAGATATATGGGCGTAGCATAGTTTATAACGTGTCGAACGTGCT
CTTCCTCGGTGCGACAATTGGATGCGCACTGAGTACTAATGTGGGAATGT
TTCTTGCCTTCCGGTTAATCTCCGGCTGTGCTGGAGTGACACCACTCGCC
CTGGGAGGGGGCTCAATTGGGGACCTAATGGCTCCCGAGAAAATGGGGAC
TGCGATGGCAATTTGGGGACTCGGATCTCTGGTGGCTCCGATGATAGTAC
GTATGCCAATTGCATTTCCATTTTTGCCACCCCAAACACTCATTCTGAAC
CTACCAGAAAGAGAAATGGCCCGGTGCGATTTGACCGACCCTGCGGCACG
GCCCCCTTCCACGTCTCCTACAACTGTCGCGAGCAACATTGCGGCAGTGG
CGAACCCAACAGAGGTCGACTGGGATGGTGACGCTGATCCTTCAAACCCC
ATGAACTGGAGCTTCTGGTATCGATGGTGCCACATCGGCGTGATATCGCT
CCTCACGTTCGTCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007677-T1.utr3p1 | KJC3_007677-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007677-T1.utr5p1 | KJC3_007677-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3092058..3094331 - |
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