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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3096873..3097987+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007678-T1 ID=KJC3_007678-T1|Name=KJC3_007678-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1115bp|location=Sequence derived from alignment at ch5:3096873..3097987+ (Aspergillus niger KJC3)
ATGCCCCCGTTCGAGAAGCTGAGGAAAATGCATAGCCCTTTCCCGGGCTC
GTTTCGCAGTAGGTTTATTCCCGCTCTCGATCATCGCACAGCGACATTGG
CTCTGAATTCTGGACTTGGCACGAGAGACGGTGACTGACCAACGCCTCAT
ACAGGTGAATGTAACAAAGCCGCCCGGATTCTAGACGCCTTTACGAACCC
ATTGAACCCGGATGGCCGCGACAGTCTCATTCCCCCGAAAGTCCTCGGAG
CTGCCAAGGCAAGTGGCATTACCACGGTCGCAAATAATCCTTACGCGGTT
GACTGACCAGCCAAGGACAGGGCTTCGCAATTTTCTCCGTCTCGAAGCTG
GGCATCGTTGGATCGGTACGAATGGGCTCGGGCATTTTAATCGCGCGCCT
CGAAGACGGCGACTGGTCTGCACCTTCAGCCATCCTGACAGCAGGAGTCG
GAGTAGGATCGCAGCTGGGCGTGGAGGTGACCAATTTCGTCTTCGTCCTC
AACACAACCAGCGCCGTTCGCACATTTGCCCAGCTGGGGAGTTTGTCTCT
GGGCAAGACAGCTTCATTTGCCATGGGCCCATCGGGGAGATTTGGCGAAG
TCAACGGAGTGGTCAGTGCCGGTGGGATGGCGGGCATCTTTGTCTACGGC
CATAATCAAGGTTTTTTTGGCGGCTTCAGTACGGAAGGGAGCATGATATT
CGAACGCCGCGGCGCAAACCAGAAGTTATATGGGAAGAAGATCAAGGCGC
GCGATTTAATCGAGGGCCAGTTCCCACCCCCCGAGGAGGCGGACGAGTTG
ATGAACGTCCTGCGCTCCGATCTGTTCGCGCCTCGACCGGAATTGTACGC
TACCTCTTCTGCTTCCACCAAAGGTTCCATTTCTTCCGAACGGCCATTGC
AGTCCTCTGCCGGCACAGACATTCAGAAAAAGCCAATTGAAATGCCTGCT
GATGAGATCGTCCAATTGCCCGCCGAACTACCCGCCGAATTCATCGCTGA
GCTCCCAGCAGAGGTGGTGCCGGACATCTACTACGACAAATCGGTCGGCT
CGTCGGAGACGCTGCTGCCAGAGTTGCCATCCGAGCCAGCCTCGGTGCGT
CCAGCAAAGAGTTGA back to topCoding sequence (CDS) from alignment at ch5:3096873..3097987+ >KJC3_007678-T1 ID=KJC3_007678-T1|Name=KJC3_007678-T1|organism=Aspergillus niger KJC3|type=CDS|length=2871bp|location=Sequence derived from alignment at ch5:3096873..3097987+ (Aspergillus niger KJC3)
ATGCCCCCGTTCGAGAAGCTGAGGAAAATGCATAGCCCTTTCCCGGGCTC
GTTTCGCAGTGAATGTAACAAAGCCGCCCGGATTCTAGACGCCTTTACGA
ACCCATTGAACCCGGATGGCCGCGACAGTCTCATTCCCCCGAAAGTCCTC
GGAGCTGCCAAGGGCTTCGCAATTTTCTCCGTCTCGAAGCTGGGCATCGT
TGGATCGGTACGAATGGGCTCGGGCATTTTAATCGCGCGCCTCGAAGACG
GCGACTGGTCTGCACCTTCAGCCATCCTGACAGCAGGAGTCGGAGTAGGA
TCGCAGCTGGGCGTGGAGGTGACCAATTTCGTCTTCGTCCTCAACACAAC
CAGCGCCGTTCGCACATTTGCCCAGCTGGGGAGTTTGTCTCTGGGCAAGA
CAGCTTCATTTGCCATGGGCCCATCGGGGAGATTTGGCGAAGTCAACGGA
GTGGTCAGTGCCGGTGGGATGGCGGGCATCTTTGTCTACGGCCATAATCA
AGGTTTTTTTGGCGGCTTCAGTACGGAAGGGAGCATGATATTCGAACGCC
GCGGCGCAAACCAGAAGTTATATGGGAAGAAGATCAAGGCGCGCGATTTA
ATCGAGGGCCAGTTCCCACCCCCCGAGGAGGCGGACGAGTTGATGAACGT
CCTGCGCTCCGATCTGTTCGCGCCTCGACCGGAATTGTACGCTACCTCTT
CTGCTTCCACCAAAGGTTCCATTTCTTCCGAACGGCCATTGCAGTCCTCT
GCCGGCACAGACATTCAGAAAAAGCCAATTGAAATGCCTGCTGATGAGAT
CGTCCAATTGCCCGCCGAACTACCCGCCGAATTCATCGCTGAGCTCCCAG
CAGAGGTGGTGCCGGACATCTACTACGACAAATCGGTCGGCTCGTCGGAG
ACGCTGCTGCCAGAGTTGCCATCCGAGCCAGCCTCGGTGCGTCCAGCAAA
GAGTTGAATGCCCCCGTTCGAGAAGCTGAGGAAAATGCATAGCCCTTTCC
CGGGCTCGTTTCGCAGTGAATGTAACAAAGCCGCCCGGATTCTAGACGCC
TTTACGAACCCATTGAACCCGGATGGCCGCGACAGTCTCATTCCCCCGAA
AGTCCTCGGAGCTGCCAAGGGCTTCGCAATTTTCTCCGTCTCGAAGCTGG
GCATCGTTGGATCGGTACGAATGGGCTCGGGCATTTTAATCGCGCGCCTC
GAAGACGGCGACTGGTCTGCACCTTCAGCCATCCTGACAGCAGGAGTCGG
AGTAGGATCGCAGCTGGGCGTGGAGGTGACCAATTTCGTCTTCGTCCTCA
ACACAACCAGCGCCGTTCGCACATTTGCCCAGCTGGGGAGTTTGTCTCTG
GGCAAGACAGCTTCATTTGCCATGGGCCCATCGGGGAGATTTGGCGAAGT
CAACGGAGTGGTCAGTGCCGGTGGGATGGCGGGCATCTTTGTCTACGGCC
ATAATCAAGGTTTTTTTGGCGGCTTCAGTACGGAAGGGAGCATGATATTC
GAACGCCGCGGCGCAAACCAGAAGTTATATGGGAAGAAGATCAAGGCGCG
CGATTTAATCGAGGGCCAGTTCCCACCCCCCGAGGAGGCGGACGAGTTGA
TGAACGTCCTGCGCTCCGATCTGTTCGCGCCTCGACCGGAATTGTACGCT
ACCTCTTCTGCTTCCACCAAAGGTTCCATTTCTTCCGAACGGCCATTGCA
GTCCTCTGCCGGCACAGACATTCAGAAAAAGCCAATTGAAATGCCTGCTG
ATGAGATCGTCCAATTGCCCGCCGAACTACCCGCCGAATTCATCGCTGAG
CTCCCAGCAGAGGTGGTGCCGGACATCTACTACGACAAATCGGTCGGCTC
GTCGGAGACGCTGCTGCCAGAGTTGCCATCCGAGCCAGCCTCGGTGCGTC
CAGCAAAGAGTTGAATGCCCCCGTTCGAGAAGCTGAGGAAAATGCATAGC
CCTTTCCCGGGCTCGTTTCGCAGTGAATGTAACAAAGCCGCCCGGATTCT
AGACGCCTTTACGAACCCATTGAACCCGGATGGCCGCGACAGTCTCATTC
CCCCGAAAGTCCTCGGAGCTGCCAAGGGCTTCGCAATTTTCTCCGTCTCG
AAGCTGGGCATCGTTGGATCGGTACGAATGGGCTCGGGCATTTTAATCGC
GCGCCTCGAAGACGGCGACTGGTCTGCACCTTCAGCCATCCTGACAGCAG
GAGTCGGAGTAGGATCGCAGCTGGGCGTGGAGGTGACCAATTTCGTCTTC
GTCCTCAACACAACCAGCGCCGTTCGCACATTTGCCCAGCTGGGGAGTTT
GTCTCTGGGCAAGACAGCTTCATTTGCCATGGGCCCATCGGGGAGATTTG
GCGAAGTCAACGGAGTGGTCAGTGCCGGTGGGATGGCGGGCATCTTTGTC
TACGGCCATAATCAAGGTTTTTTTGGCGGCTTCAGTACGGAAGGGAGCAT
GATATTCGAACGCCGCGGCGCAAACCAGAAGTTATATGGGAAGAAGATCA
AGGCGCGCGATTTAATCGAGGGCCAGTTCCCACCCCCCGAGGAGGCGGAC
GAGTTGATGAACGTCCTGCGCTCCGATCTGTTCGCGCCTCGACCGGAATT
GTACGCTACCTCTTCTGCTTCCACCAAAGGTTCCATTTCTTCCGAACGGC
CATTGCAGTCCTCTGCCGGCACAGACATTCAGAAAAAGCCAATTGAAATG
CCTGCTGATGAGATCGTCCAATTGCCCGCCGAACTACCCGCCGAATTCAT
CGCTGAGCTCCCAGCAGAGGTGGTGCCGGACATCTACTACGACAAATCGG
TCGGCTCGTCGGAGACGCTGCTGCCAGAGTTGCCATCCGAGCCAGCCTCG
GTGCGTCCAGCAAAGAGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033643 |
| DBxref | InterPro:IPR007461 |
| DBxref | PFAM:PF04366 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3096873..3097987 + |
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