KJC3_007679-T1, KJC3_007679-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_007679-T1
Unique Name	KJC3_007679-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch5:3098642..3100703+
coding sequence from alignment at ch5:3098642..3100703+

mRNA from alignment at ch5:3098642..3100703+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_007679-T1 ID=KJC3_007679-T1|Name=KJC3_007679-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2062bp|location=Sequence derived from alignment at ch5:3098642..3100703+ (Aspergillus niger KJC3)
ATGGATGATTTATCCCACCCGGCGCAAGCAACTGCATCATCCCAGACCAC
GTATCCCCGTAGCTGCATCCCCTGCAATCGCAGAAAGCTCCGATGCGACC
GGAAATTTCCCTGCGGCCGGTGTGTGAAGGGCGGCGAGCAATGTGTCTTT
CCGGGTCCCAAGCGAGCGCCCCGACAGCTCAAACGGCCTCCCATCGCGGA
GGTGTTGGCCCAGCTGCGACAGCTAGAGCAAGAGGTCCAGCTCCTGCGCG
CTCAAGCTCAGCAACCCGCGGAGGCTGGAGCGTCTCCACTCGGCCATCCT
CTGGAGGAGGCCGCTGGTCCACTGGAGCCAGGCGAGCGGGAAGGCAGGCT
AGTTGTCAAGGAAGGTAAGAGTCGTTATGTGGGGGATGCTCCCTCGGCTG
TGCTGGGGGATAAGGTTAGATCAACTTTCCTCGTCTGATACTTGTTCCTT
CTCCCAACAAGAGCCCTGACGGGTGTGTTCGTGACTATTATAGATCCGAG
AACTACAGGATATCTGTGATGCATCATCCTCCGAGGATGAACTGGAGACC
CCAGAGACATCCGGCTTGCACTTCGCCAGTAGCCTCGGGGGCAACTGGCG
CAATCACAGTTTACGGGACACCTATCTCCAGCCAGATCAGATGCAGCGCT
TATGGCAAGTCTACCAAGACAATGTGGCACCGTTACTCGCCGTTCTACAT
GTACCTTCCGTGGAGATCATGGTACGCGAAGAATCCGAGAACATCAATCC
GGACCCTGCCCGCGAAGCACTCATTCTCGCCGTCTGCTTCGCTGCCATCG
TAACCATACCCCCAGACCAGTGCATGACCTTGGTGGGTATGGATTGCGAA
AAGGCCATCCAGAGCTATCAGCTCGCCGTGGACCAGGCGTTGGTACGAGC
CAACTTCATCAAGTCCCAGAATATCTGCGTCTTGCAAGCTGCGGTGATCT
TCTTGCTCTGTCTCCGTTGGAGAGGCGATGCGAGACTCGTCTGGGCGGCG
TCTGCCGTTGTGGTTCGCGTGGCTCAGGGACAGGGCATTCATCGCGACGG
TCAAAGCCTTGGACTCAGCCCATTTGACTCGGAAATGCGACGTCGCTTAT
GGTGGCACATCTGTCTTCTGGATATGGTGTGCTCTGAGGAGCAAGGGACC
GACACCCAAATCCAGCCAGGCATGTTTGACACTCGTCTCCCCCATAACAT
CGACGGGGCAGATCTGGACCCATCCATGACCGAGCTGCCACCGGAGAAGA
CTGGTGCCACCGATATCACCCTCCTCATAATCCAGTGCGACATCATCTCG
GAACTTAACTGGCCGAATCGGCGTAACGGTGGTGCAAGAGATGCACAATC
CACCGCTGATCAGGAACCGCTCGTTACCACCGTAGCGAACCGTCTGGAAG
GTCGCTTTTTGCAACACTTGGACATGAACATCCCAATTCAATGGGTATAC
GCCATGATTATCCGGCTTACCCTGTCAAAACTGTGGCTATACGCCCATTA
CAACAAAATGGCCAGCCATGAGTCTCGATCCGGATGGTCGCAAGCCGCCT
GCGATGATGCCTTTCAAGCGGCCGTCGAAACGATCAAATTCACCATTCTG
CTGCATACGAACGAGAGTACTTCGCAATGGGCGTGGCTATGCAAGACCTA
TAAGCAGTGGCACACGGTCGCGTTCATCCTCGCGGAGCTGTGCAACCGCC
CTATCACGGCCGAGACCGACCATGCCTGGCAGGTGGTGACGGAGATCCAG
CGGCAATGGGAACAAGATGGCTCGCCCCAGAGTGTCATGCTCCGGAAGCC
CCTCAAGCGCTTGATGCAACGGACGGCATCGACCAGGGCGGCCAAGATGG
GGATATCGCCAGGCTCCTCACTGGGCACGGAGGTTAAGGATGATGATAGC
ATCGGGTCGGGTTTGATGTCCTTTAATACAAACCCTCTGCCAGGTATGGA
TTTCTCTCAGGTATCCCTGGGTCAAGGATCTCTTCCCCCGGATGCGTATT
CACTGGGGATGGCTGGTTTTGGTGTTTCGGGCATGGAGTGGCTGTGGGAG
CCATTGCTGTGA

Coding sequence (CDS) from alignment at ch5:3098642..3100703+

>KJC3_007679-T1 ID=KJC3_007679-T1|Name=KJC3_007679-T1|organism=Aspergillus niger KJC3|type=CDS|length=3966bp|location=Sequence derived from alignment at ch5:3098642..3100703+ (Aspergillus niger KJC3)
ATGGATGATTTATCCCACCCGGCGCAAGCAACTGCATCATCCCAGACCAC
GTATCCCCGTAGCTGCATCCCCTGCAATCGCAGAAAGCTCCGATGCGACC
GGAAATTTCCCTGCGGCCGGTGTGTGAAGGGCGGCGAGCAATGTGTCTTT
CCGGGTCCCAAGCGAGCGCCCCGACAGCTCAAACGGCCTCCCATCGCGGA
GGTGTTGGCCCAGCTGCGACAGCTAGAGCAAGAGGTCCAGCTCCTGCGCG
CTCAAGCTCAGCAACCCGCGGAGGCTGGAGCGTCTCCACTCGGCCATCCT
CTGGAGGAGGCCGCTGGTCCACTGGAGCCAGGCGAGCGGGAAGGCAGGCT
AGTTGTCAAGGAAGGTAAGAGTCGTTATGTGGGGGATGCTCCCTCGGCTG
TGCTGGGGGATAAGATCCGAGAACTACAGGATATCTGTGATGCATCATCC
TCCGAGGATGAACTGGAGACCCCAGAGACATCCGGCTTGCACTTCGCCAG
TAGCCTCGGGGGCAACTGGCGCAATCACAGTTTACGGGACACCTATCTCC
AGCCAGATCAGATGCAGCGCTTATGGCAAGTCTACCAAGACAATGTGGCA
CCGTTACTCGCCGTTCTACATGTACCTTCCGTGGAGATCATGGTACGCGA
AGAATCCGAGAACATCAATCCGGACCCTGCCCGCGAAGCACTCATTCTCG
CCGTCTGCTTCGCTGCCATCGTAACCATACCCCCAGACCAGTGCATGACC
TTGGTGGGTATGGATTGCGAAAAGGCCATCCAGAGCTATCAGCTCGCCGT
GGACCAGGCGTTGGTACGAGCCAACTTCATCAAGTCCCAGAATATCTGCG
TCTTGCAAGCTGCGGTGATCTTCTTGCTCTGTCTCCGTTGGAGAGGCGAT
GCGAGACTCGTCTGGGCGGCGTCTGCCGTTGTGGTTCGCGTGGCTCAGGG
ACAGGGCATTCATCGCGACGGTCAAAGCCTTGGACTCAGCCCATTTGACT
CGGAAATGCGACGTCGCTTATGGTGGCACATCTGTCTTCTGGATATGGTG
TGCTCTGAGGAGCAAGGGACCGACACCCAAATCCAGCCAGGCATGTTTGA
CACTCGTCTCCCCCATAACATCGACGGGGCAGATCTGGACCCATCCATGA
CCGAGCTGCCACCGGAGAAGACTGGTGCCACCGATATCACCCTCCTCATA
ATCCAGTGCGACATCATCTCGGAACTTAACTGGCCGAATCGGCGTAACGG
TGGTGCAAGAGATGCACAATCCACCGCTGATCAGGAACCGCTCGTTACCA
CCGTAGCGAACCGTCTGGAAGGTCGCTTTTTGCAACACTTGGACATGAAC
ATCCCAATTCAATGGGTATACGCCATGATTATCCGGCTTACCCTGTCAAA
ACTGTGGCTATACGCCCATTACAACAAAATGGCCAGCCATGAGTCTCGAT
CCGGATGGTCGCAAGCCGCCTGCGATGATGCCTTTCAAGCGGCCGTCGAA
ACGATCAAATTCACCATTCTGCTGCATACGAACGAGAGTACTTCGCAATG
GGCGTGGCTATGCAAGACCTATAAGCAGTGGCACACGGTCGCGTTCATCC
TCGCGGAGCTGTGCAACCGCCCTATCACGGCCGAGACCGACCATGCCTGG
CAGGTGGTGACGGAGATCCAGCGGCAATGGGAACAAGATGGCTCGCCCCA
GAGTGTCATGCTCCGGAAGCCCCTCAAGCGCTTGATGCAACGGACGGCAT
CGACCAGGGCGGCCAAGATGGGGATATCGCCAGGCTCCTCACTGGGCACG
GAGGTTAAGGATGATGATAGCATCGGGTCGGGTTTGATGTCCTTTAATAC
AAACCCTCTGCCAGGTATGGATTTCTCTCAGGTATCCCTGGGTCAAGGAT
CTCTTCCCCCGGATGCGTATTCACTGGGGATGGCTGGTTTTGGTGTTTCG
GGCATGGAGTGGCTGTGGGAGCCATTGCTGTGAATGGATGATTTATCCCA
CCCGGCGCAAGCAACTGCATCATCCCAGACCACGTATCCCCGTAGCTGCA
TCCCCTGCAATCGCAGAAAGCTCCGATGCGACCGGAAATTTCCCTGCGGC
CGGTGTGTGAAGGGCGGCGAGCAATGTGTCTTTCCGGGTCCCAAGCGAGC
GCCCCGACAGCTCAAACGGCCTCCCATCGCGGAGGTGTTGGCCCAGCTGC
GACAGCTAGAGCAAGAGGTCCAGCTCCTGCGCGCTCAAGCTCAGCAACCC
GCGGAGGCTGGAGCGTCTCCACTCGGCCATCCTCTGGAGGAGGCCGCTGG
TCCACTGGAGCCAGGCGAGCGGGAAGGCAGGCTAGTTGTCAAGGAAGGTA
AGAGTCGTTATGTGGGGGATGCTCCCTCGGCTGTGCTGGGGGATAAGATC
CGAGAACTACAGGATATCTGTGATGCATCATCCTCCGAGGATGAACTGGA
GACCCCAGAGACATCCGGCTTGCACTTCGCCAGTAGCCTCGGGGGCAACT
GGCGCAATCACAGTTTACGGGACACCTATCTCCAGCCAGATCAGATGCAG
CGCTTATGGCAAGTCTACCAAGACAATGTGGCACCGTTACTCGCCGTTCT
ACATGTACCTTCCGTGGAGATCATGGTACGCGAAGAATCCGAGAACATCA
ATCCGGACCCTGCCCGCGAAGCACTCATTCTCGCCGTCTGCTTCGCTGCC
ATCGTAACCATACCCCCAGACCAGTGCATGACCTTGGTGGGTATGGATTG
CGAAAAGGCCATCCAGAGCTATCAGCTCGCCGTGGACCAGGCGTTGGTAC
GAGCCAACTTCATCAAGTCCCAGAATATCTGCGTCTTGCAAGCTGCGGTG
ATCTTCTTGCTCTGTCTCCGTTGGAGAGGCGATGCGAGACTCGTCTGGGC
GGCGTCTGCCGTTGTGGTTCGCGTGGCTCAGGGACAGGGCATTCATCGCG
ACGGTCAAAGCCTTGGACTCAGCCCATTTGACTCGGAAATGCGACGTCGC
TTATGGTGGCACATCTGTCTTCTGGATATGGTGTGCTCTGAGGAGCAAGG
GACCGACACCCAAATCCAGCCAGGCATGTTTGACACTCGTCTCCCCCATA
ACATCGACGGGGCAGATCTGGACCCATCCATGACCGAGCTGCCACCGGAG
AAGACTGGTGCCACCGATATCACCCTCCTCATAATCCAGTGCGACATCAT
CTCGGAACTTAACTGGCCGAATCGGCGTAACGGTGGTGCAAGAGATGCAC
AATCCACCGCTGATCAGGAACCGCTCGTTACCACCGTAGCGAACCGTCTG
GAAGGTCGCTTTTTGCAACACTTGGACATGAACATCCCAATTCAATGGGT
ATACGCCATGATTATCCGGCTTACCCTGTCAAAACTGTGGCTATACGCCC
ATTACAACAAAATGGCCAGCCATGAGTCTCGATCCGGATGGTCGCAAGCC
GCCTGCGATGATGCCTTTCAAGCGGCCGTCGAAACGATCAAATTCACCAT
TCTGCTGCATACGAACGAGAGTACTTCGCAATGGGCGTGGCTATGCAAGA
CCTATAAGCAGTGGCACACGGTCGCGTTCATCCTCGCGGAGCTGTGCAAC
CGCCCTATCACGGCCGAGACCGACCATGCCTGGCAGGTGGTGACGGAGAT
CCAGCGGCAATGGGAACAAGATGGCTCGCCCCAGAGTGTCATGCTCCGGA
AGCCCCTCAAGCGCTTGATGCAACGGACGGCATCGACCAGGGCGGCCAAG
ATGGGGATATCGCCAGGCTCCTCACTGGGCACGGAGGTTAAGGATGATGA
TAGCATCGGGTCGGGTTTGATGTCCTTTAATACAAACCCTCTGCCAGGTA
TGGATTTCTCTCAGGTATCCCTGGGTCAAGGATCTCTTCCCCCGGATGCG
TATTCACTGGGGATGGCTGGTTTTGGTGTTTCGGGCATGGAGTGGCTGTG
GGAGCCATTGCTGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0006351	transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677	DNA binding
GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_007679	KJC3_007679	Aspergillus niger KJC3	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007679-T1.exon1	KJC3_007679-T1.exon1	Aspergillus niger KJC3	exon
KJC3_007679-T1.exon2	KJC3_007679-T1.exon2	Aspergillus niger KJC3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007679-T1.cds	KJC3_007679-T1.cds	Aspergillus niger KJC3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007679-T1	KJC3_007679-T1-protein	Aspergillus niger KJC3	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	InterPro:IPR007219
DBxref	PFAM:PF00172
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch5	supercontig	ch5:3098642..3100703 +

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KJC3_007679-T1, KJC3_007679-T1 (mRNA) Aspergillus niger KJC3

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KJC3_007679-T1, KJC3_007679-T1 (mRNA) Aspergillus niger KJC3