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KJC3_007685-T1, KJC3_007685-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007685-T1
Unique NameKJC3_007685-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3111634..3112716+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007685-T1 ID=KJC3_007685-T1|Name=KJC3_007685-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1083bp|location=Sequence derived from alignment at ch5:3111634..3112716+ (Aspergillus niger KJC3)
CATTGGAGGAATCTGTCAGTCACCCAACCCCGACCATGCAGAACTACTAC
TGACATTATGCTTCATCTTCAGTGGAAACAATCGGATATGTTGGCCGTCT
GCTGTCATCGCTTGAAAGCCCCAACTACAGCACAGGCTCGTATGCCATGC
AAAGCGCCCTTATTCTGATCGCTCCCGCCTTCCTGGCTGCCAGTATTTAC
ATGACCCTCGGTCGCATCATTCGAATGGTCCAAGCCGAACAGTACTCGGT
GTTCAGGTTGAACTGGGTGACCAAGATCTTTGTTGCGGGCGACGTTCTTT
CCTTTCTGATGCAAGCCTCTGGTGCGTATATTCCTGTCTCCGAATCCTTT
CTGGCAGTATCGCTAAGAACAGTAGGCGCTGGTCTCATGGTCAGCAACTC
TAGCGACCCATCCACGGGCGAGCACATTATTATCGGCGGTCTCTTTGTTC
AGATTATCTTCTTCGGCTTCTTCATTATCACCGCGCTCATCTTCCAAATG
CGACTAGCGAAGGCTCCCACCGGCACTTCCGTTGATTTATCGCACATCTG
GCGTCGCCACATGAACGCTCTTTACATCTCCAGTGTCCTGATCTTCGTCC
GTTCCATTGTCCGTGTGGTGGAGTACCTGCAGGGATATGACGGCTATCTC
ATGAAGCATGAGGTTTTCATTTATGTGTTTGATGCGTTGCTGATGTTCCT
GGCGATGGAGATACTCCAATTCATCCATCCCAGCCAAGTCAACTGCTATC
TGGGGCGTGGAGACCGTTATTCTGACAAGGTGATCAAGACGCAAAAGTTC
ATGTCTGTGCCGGTGGAAATGGAGGTTTCGTCCGTTTGAAAGACTTGCAT
TATTATCCCTTGTGATGTATGTTATGATTGTCATGGTTACTGGCGTTCAC
TGTCTCATTATTCATCGTGTTTGTCAATCTGTTCATAATAGATGTTTTGT
TCTCACATTATTATATCTCATCGATTCATCGTCACAAAGGTGTTGAAACA
TACCCGCTCATTGTGGAATCATAGCTGTGGTTATTTAGCTAGAGTGAGGA
CAAGAATACTTTTTCCCAACGCCTCCGATACCG
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Coding sequence (CDS) from alignment at ch5:3111634..3112716+

>KJC3_007685-T1 ID=KJC3_007685-T1|Name=KJC3_007685-T1|organism=Aspergillus niger KJC3|type=CDS|length=1278bp|location=Sequence derived from alignment at ch5:3111634..3112716+ (Aspergillus niger KJC3)
ATGCAAAGCGCCCTTATTCTGATCGCTCCCGCCTTCCTGGCTGCCAGTAT
TTACATGACCCTCGGTCGCATCATTCGAATGGTCCAAGCCGAACAGTACT
CGGTGTTCAGGTTGAACTGGGTGACCAAGATCTTTGTTGCGGGCGACGTT
CTTTCCTTTCTGATGCAAGCCTCTGGCGCTGGTCTCATGGTCAGCAACTC
TAGCGACCCATCCACGGGCGAGCACATTATTATCGGCGGTCTCTTTGTTC
AGATTATCTTCTTCGGCTTCTTCATTATCACCGCGCTCATCTTCCAAATG
CGACTAGCGAAGGCTCCCACCGGCACTTCCGTTGATTTATCGCACATCTG
GCGTCGCCACATGAACGCTCTTTACATCTCCAGTGTCCTGATCTTCGTCC
GTTCCATTGTCCGTGTGGTGGAGTACCTGCAGGGATATGACGGCTATCTC
ATGAAGCATGAGGTTTTCATTTATGTGTTTGATGCGTTGCTGATGTTCCT
GGCGATGGAGATACTCCAATTCATCCATCCCAGCCAAGTCAACTGCTATC
TGGGGCGTGGAGACCGTTATTCTGACAAGGTGATCAAGACGCAAAAGTTC
ATGTCTGTGCCGGTGGAAATGGAGGTTTCGTCCGTTTGAATGCAAAGCGC
CCTTATTCTGATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACATGACCC
TCGGTCGCATCATTCGAATGGTCCAAGCCGAACAGTACTCGGTGTTCAGG
TTGAACTGGGTGACCAAGATCTTTGTTGCGGGCGACGTTCTTTCCTTTCT
GATGCAAGCCTCTGGCGCTGGTCTCATGGTCAGCAACTCTAGCGACCCAT
CCACGGGCGAGCACATTATTATCGGCGGTCTCTTTGTTCAGATTATCTTC
TTCGGCTTCTTCATTATCACCGCGCTCATCTTCCAAATGCGACTAGCGAA
GGCTCCCACCGGCACTTCCGTTGATTTATCGCACATCTGGCGTCGCCACA
TGAACGCTCTTTACATCTCCAGTGTCCTGATCTTCGTCCGTTCCATTGTC
CGTGTGGTGGAGTACCTGCAGGGATATGACGGCTATCTCATGAAGCATGA
GGTTTTCATTTATGTGTTTGATGCGTTGCTGATGTTCCTGGCGATGGAGA
TACTCCAATTCATCCATCCCAGCCAAGTCAACTGCTATCTGGGGCGTGGA
GACCGTTATTCTGACAAGGTGATCAAGACGCAAAAGTTCATGTCTGTGCC
GGTGGAAATGGAGGTTTCGTCCGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007685KJC3_007685Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007685-T1.utr5p1KJC3_007685-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007685-T1.exon1KJC3_007685-T1.exon1Aspergillus niger KJC3exon
KJC3_007685-T1.exon2KJC3_007685-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007685-T1.cdsKJC3_007685-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007685-T1.utr3p1KJC3_007685-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007685-T1KJC3_007685-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_5.4
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3111634..3112716 +
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