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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3147652..3150084- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007698-T1 ID=KJC3_007698-T1|Name=KJC3_007698-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2433bp|location=Sequence derived from alignment at ch5:3147652..3150084- (Aspergillus niger KJC3)
GGTTGGTTGATATCAAGCATCTAGGGCTCGATATCGGCGAAGAGCAGAAA
CACCGATGGGGGTCAGATATTTCCGATCGGTCAAAGCTTTCACAGCCGAC
TTGCATCACTAGATCTGCTCGACGACCGTCATCGTGTCTGCAAGGTTATG
CCGCAATCTCACTGTGCAACTGGCTCGGTGACCACCCGAGGCTGGCGATT
GGCGAACGATGAGGGGAGAGAGACATGTCAAACCCACCTCGCTAAGGTCA
AAACCCAACCAACTGCCAGACCCCTTCTACTGTGTCTTCCCCCGCACATC
TAGGATTCCCCATACGCCAAGATGATGCCAAGTATGGCGTCCCAGATTGA
GGTATAAACGTTGCCTCGCTCGGGGAGTTTTCGATTGTGTCCTCGACCAC
TCCCTCAAGCTCTCTGTCCACATTCACCATGAACATTCTTGCCACTCTCG
CCGGTCTCCCCAGGGAGATTGGCTCTACGCTGCACATGAAGCCTGTCCAG
GCGTTGATCTGGCTGGCTTGCTGGGCGTGCTGGACGCTGGGCTCTCTGCA
ATACTATGCCCTCCCGTTCACTCTCAGCACCGTGGCGGAAGCGCTCGACG
TGGCGGAAACCAACGTCTCAGAGGCCAACACCACTACGATGCTGTCCCGT
GCTGTAGGGGCAGTCATCTTTGGTATCCTGTCTGATCAATACGGGCGGAA
GATTCCCATGCTCATTGACCTGGTTCTCATGTGCGGCTTCACTGTCGCAA
CGGGGTTCTCGCAGACCTTTCCCCAGTTGATCGGATTCCGGTTCCTCTTT
GGTGGGTGCTACAGGTGAACACTGAGCGGGATAATCGTGCTAATGTGTCC
AGGCGTTGCTTACGGTGGTACATATGGTCTCGCCATGGCAACGGTGCTGG
AAGCGGTGCCGGAAAAGTCCCGCGGTGTGGTGGCTGGCTTCACGCAGCAA
GGCTTCTCGTCCGGTTATCTCTTTGCATCTGGCTTGCATCTGGCCATGAG
TAGGCTCACACTGATCCCTTTCTTTACTCATTACTCACTCTCTGGACAGA
TGGCTATGGTTGGCGCTCTCTTTTCTGGCTCTGCGCGGGCTTGACAGTCC
CCATCGCTATCCTTCACGCAGTGACCCCTTACTACAGCGTTGCCTCTCCT
GCCCCGCAAGATGAAGAGCATGCCAGCGGACCAGCCCAAACTTCTCGCGC
GGCTGTGGGAGGGAACCTTCCGTTCCATAAGAAGCTCGCCTACGTGCTCC
GCTACCACTACAAGGCCTTCATCTACGCCTGCTGTCTCACTTCCTGTCTG
GCTACCATGGGCCACGGCACCATGGATCTCTACCCGACCTTCCTCGTCAG
CCAACGCAAATTGAACATCTTGGAAGAGACCTGGGTGACCTGTATCCTGC
AGATTGGAGGTATCTTGGGCGGCGTGGTCGGCGGGTTCCTTTCCCACAAG
GTGAGCGCTAAGTGGGTGGCGGCAGGCGCAGGACTGCTGATCGCTCCGTG
GTTACCACTATGGACGCTGCCCACGAGATGGGGACTTCTCGCCCTGGGAG
CCTTCTTTTTGCAATTTTTCTACGGCGCTGCAATCGGTAACTTGGGAAAC
TTGTTGCAACAGCTGTGTCCTCATCCTGGTATCAGAGCCGCCTTTACTGG
TGTCGCATACAACATCGGTAATGCAGTGTCGTCGATCGCACCGACGATTG
AGACGTCGCTGGGAGAGCGGTTCCCGACTGCGGACGGGTCACCGGATTAT
GCGAAGACGCAGATGATCCTTGTCGGGATTGTAAGTATACATGATTCCCA
TTCTTTTATTTTTTGGACTGTAATTCGCTAATAGGTATGCTATTAGGTTA
TTTTCTGCTTAGTGTTGACCTTGACTCTCATGCCGCTGAACAGCTTGAAC
AAGAGCTGGGACCGGGAGGATCCCAATGCCACGGTCCCTGCGACGCATGC
AGAGATGGAAGTGATCGATAAAACCGATTTTAAAGCACAGGAGGCAGATG
CAGAGAGGGGTGGTTCGACACATGTTGAGGATGCCAAGCCTTAGTTCCAT
TGTTTTGTATGCTCAAGTTTTACGGTTTCGCGAGGTGGAATGAATGTAAA
GCCCGGCTTCAGCGTTCTGAATTGATTTGATTGATAAACAAATGCGCGGG
CTGGCCTGGTGATGCTCCTCCCTTGGAATGTTCTAGGGATCATGCCACCT
TTTTTCATCCTGTAAAATTAGTGCAGGAAGTAAGTTGCTCAGGACCATGG
ACGAAGGTTAGACCCTGTACCCGCAACGCTCACCCTGGTCGCTCGCACAT
GCACAAGCACTGCATAATGGTAGAATATTTCGGCATTAGCTTTGCCCCTA
ATTCCAGATCTAAGCGCTGCAGTGCATCAGTTCACCTCAAGGGGTCCCTT
GGCAGGAAAAAGAATGAGCCGCCTGGCGGGGAG back to topCoding sequence (CDS) from alignment at ch5:3147652..3150084- >KJC3_007698-T1 ID=KJC3_007698-T1|Name=KJC3_007698-T1|organism=Aspergillus niger KJC3|type=CDS|length=5796bp|location=Sequence derived from alignment at ch5:3147652..3150084- (Aspergillus niger KJC3)
GTTATTTTCTGCTTAGTGTTGACCTTGACTCTCATGCCGCTGAACAGCTT
GAACAAGAGCTGGGACCGGGAGGATCCCAATGCCACGGTCCCTGCGACGC
ATGCAGAGATGGAAGTGATCGATAAAACCGATTTTAAAGCACAGGAGGCA
GATGCAGAGAGGGGTGGTTCGACACATGTTGAGGATGCCAAGCCTTAGAT
GGCTATGGTTGGCGCTCTCTTTTCTGGCTCTGCGCGGGCTTGACAGTCCC
CATCGCTATCCTTCACGCAGTGACCCCTTACTACAGCGTTGCCTCTCCTG
CCCCGCAAGATGAAGAGCATGCCAGCGGACCAGCCCAAACTTCTCGCGCG
GCTGTGGGAGGGAACCTTCCGTTCCATAAGAAGCTCGCCTACGTGCTCCG
CTACCACTACAAGGCCTTCATCTACGCCTGCTGTCTCACTTCCTGTCTGG
CTACCATGGGCCACGGCACCATGGATCTCTACCCGACCTTCCTCGTCAGC
CAACGCAAATTGAACATCTTGGAAGAGACCTGGGTGACCTGTATCCTGCA
GATTGGAGGTATCTTGGGCGGCGTGGTCGGCGGGTTCCTTTCCCACAAGG
TGAGCGCTAAGTGGGTGGCGGCAGGCGCAGGACTGCTGATCGCTCCGTGG
TTACCACTATGGACGCTGCCCACGAGATGGGGACTTCTCGCCCTGGGAGC
CTTCTTTTTGCAATTTTTCTACGGCGCTGCAATCGGTAACTTGGGAAACT
TGTTGCAACAGCTGTGTCCTCATCCTGGTATCAGAGCCGCCTTTACTGGT
GTCGCATACAACATCGGTAATGCAGTGTCGTCGATCGCACCGACGATTGA
GACGTCGCTGGGAGAGCGGTTCCCGACTGCGGACGGGTCACCGGATTATG
CGAAGACGCAGATGATCCTTGTCGGGATTGCGTTGCTTACGGTGGTACAT
ATGGTCTCGCCATGGCAACGGTGCTGGAAGCGGTGCCGGAAAAGTCCCGC
GGTGTGGTGGCTGGCTTCACGCAGCAAGGCTTCTCGTCCGGTTATCTCTT
TGCATCTGGCTTGCATCTGGCCATGAATGAACATTCTTGCCACTCTCGCC
GGTCTCCCCAGGGAGATTGGCTCTACGCTGCACATGAAGCCTGTCCAGGC
GTTGATCTGGCTGGCTTGCTGGGCGTGCTGGACGCTGGGCTCTCTGCAAT
ACTATGCCCTCCCGTTCACTCTCAGCACCGTGGCGGAAGCGCTCGACGTG
GCGGAAACCAACGTCTCAGAGGCCAACACCACTACGATGCTGTCCCGTGC
TGTAGGGGCAGTCATCTTTGGTATCCTGTCTGATCAATACGGGCGGAAGA
TTCCCATGCTCATTGACCTGGTTCTCATGTGCGGCTTCACTGTCGCAACG
GGGTTCTCGCAGACCTTTCCCCAGTTGATCGGATTCCGGTTCCTCTTTGG
TTATTTTCTGCTTAGTGTTGACCTTGACTCTCATGCCGCTGAACAGCTTG
AACAAGAGCTGGGACCGGGAGGATCCCAATGCCACGGTCCCTGCGACGCA
TGCAGAGATGGAAGTGATCGATAAAACCGATTTTAAAGCACAGGAGGCAG
ATGCAGAGAGGGGTGGTTCGACACATGTTGAGGATGCCAAGCCTTAGATG
GCTATGGTTGGCGCTCTCTTTTCTGGCTCTGCGCGGGCTTGACAGTCCCC
ATCGCTATCCTTCACGCAGTGACCCCTTACTACAGCGTTGCCTCTCCTGC
CCCGCAAGATGAAGAGCATGCCAGCGGACCAGCCCAAACTTCTCGCGCGG
CTGTGGGAGGGAACCTTCCGTTCCATAAGAAGCTCGCCTACGTGCTCCGC
TACCACTACAAGGCCTTCATCTACGCCTGCTGTCTCACTTCCTGTCTGGC
TACCATGGGCCACGGCACCATGGATCTCTACCCGACCTTCCTCGTCAGCC
AACGCAAATTGAACATCTTGGAAGAGACCTGGGTGACCTGTATCCTGCAG
ATTGGAGGTATCTTGGGCGGCGTGGTCGGCGGGTTCCTTTCCCACAAGGT
GAGCGCTAAGTGGGTGGCGGCAGGCGCAGGACTGCTGATCGCTCCGTGGT
TACCACTATGGACGCTGCCCACGAGATGGGGACTTCTCGCCCTGGGAGCC
TTCTTTTTGCAATTTTTCTACGGCGCTGCAATCGGTAACTTGGGAAACTT
GTTGCAACAGCTGTGTCCTCATCCTGGTATCAGAGCCGCCTTTACTGGTG
TCGCATACAACATCGGTAATGCAGTGTCGTCGATCGCACCGACGATTGAG
ACGTCGCTGGGAGAGCGGTTCCCGACTGCGGACGGGTCACCGGATTATGC
GAAGACGCAGATGATCCTTGTCGGGATTGCGTTGCTTACGGTGGTACATA
TGGTCTCGCCATGGCAACGGTGCTGGAAGCGGTGCCGGAAAAGTCCCGCG
GTGTGGTGGCTGGCTTCACGCAGCAAGGCTTCTCGTCCGGTTATCTCTTT
GCATCTGGCTTGCATCTGGCCATGAATGAACATTCTTGCCACTCTCGCCG
GTCTCCCCAGGGAGATTGGCTCTACGCTGCACATGAAGCCTGTCCAGGCG
TTGATCTGGCTGGCTTGCTGGGCGTGCTGGACGCTGGGCTCTCTGCAATA
CTATGCCCTCCCGTTCACTCTCAGCACCGTGGCGGAAGCGCTCGACGTGG
CGGAAACCAACGTCTCAGAGGCCAACACCACTACGATGCTGTCCCGTGCT
GTAGGGGCAGTCATCTTTGGTATCCTGTCTGATCAATACGGGCGGAAGAT
TCCCATGCTCATTGACCTGGTTCTCATGTGCGGCTTCACTGTCGCAACGG
GGTTCTCGCAGACCTTTCCCCAGTTGATCGGATTCCGGTTCCTCTTTGGT
TATTTTCTGCTTAGTGTTGACCTTGACTCTCATGCCGCTGAACAGCTTGA
ACAAGAGCTGGGACCGGGAGGATCCCAATGCCACGGTCCCTGCGACGCAT
GCAGAGATGGAAGTGATCGATAAAACCGATTTTAAAGCACAGGAGGCAGA
TGCAGAGAGGGGTGGTTCGACACATGTTGAGGATGCCAAGCCTTAGATGG
CTATGGTTGGCGCTCTCTTTTCTGGCTCTGCGCGGGCTTGACAGTCCCCA
TCGCTATCCTTCACGCAGTGACCCCTTACTACAGCGTTGCCTCTCCTGCC
CCGCAAGATGAAGAGCATGCCAGCGGACCAGCCCAAACTTCTCGCGCGGC
TGTGGGAGGGAACCTTCCGTTCCATAAGAAGCTCGCCTACGTGCTCCGCT
ACCACTACAAGGCCTTCATCTACGCCTGCTGTCTCACTTCCTGTCTGGCT
ACCATGGGCCACGGCACCATGGATCTCTACCCGACCTTCCTCGTCAGCCA
ACGCAAATTGAACATCTTGGAAGAGACCTGGGTGACCTGTATCCTGCAGA
TTGGAGGTATCTTGGGCGGCGTGGTCGGCGGGTTCCTTTCCCACAAGGTG
AGCGCTAAGTGGGTGGCGGCAGGCGCAGGACTGCTGATCGCTCCGTGGTT
ACCACTATGGACGCTGCCCACGAGATGGGGACTTCTCGCCCTGGGAGCCT
TCTTTTTGCAATTTTTCTACGGCGCTGCAATCGGTAACTTGGGAAACTTG
TTGCAACAGCTGTGTCCTCATCCTGGTATCAGAGCCGCCTTTACTGGTGT
CGCATACAACATCGGTAATGCAGTGTCGTCGATCGCACCGACGATTGAGA
CGTCGCTGGGAGAGCGGTTCCCGACTGCGGACGGGTCACCGGATTATGCG
AAGACGCAGATGATCCTTGTCGGGATTGCGTTGCTTACGGTGGTACATAT
GGTCTCGCCATGGCAACGGTGCTGGAAGCGGTGCCGGAAAAGTCCCGCGG
TGTGGTGGCTGGCTTCACGCAGCAAGGCTTCTCGTCCGGTTATCTCTTTG
CATCTGGCTTGCATCTGGCCATGAATGAACATTCTTGCCACTCTCGCCGG
TCTCCCCAGGGAGATTGGCTCTACGCTGCACATGAAGCCTGTCCAGGCGT
TGATCTGGCTGGCTTGCTGGGCGTGCTGGACGCTGGGCTCTCTGCAATAC
TATGCCCTCCCGTTCACTCTCAGCACCGTGGCGGAAGCGCTCGACGTGGC
GGAAACCAACGTCTCAGAGGCCAACACCACTACGATGCTGTCCCGTGCTG
TAGGGGCAGTCATCTTTGGTATCCTGTCTGATCAATACGGGCGGAAGATT
CCCATGCTCATTGACCTGGTTCTCATGTGCGGCTTCACTGTCGCAACGGG
GTTCTCGCAGACCTTTCCCCAGTTGATCGGATTCCGGTTCCTCTTTGGTT
ATTTTCTGCTTAGTGTTGACCTTGACTCTCATGCCGCTGAACAGCTTGAA
CAAGAGCTGGGACCGGGAGGATCCCAATGCCACGGTCCCTGCGACGCATG
CAGAGATGGAAGTGATCGATAAAACCGATTTTAAAGCACAGGAGGCAGAT
GCAGAGAGGGGTGGTTCGACACATGTTGAGGATGCCAAGCCTTAGATGGC
TATGGTTGGCGCTCTCTTTTCTGGCTCTGCGCGGGCTTGACAGTCCCCAT
CGCTATCCTTCACGCAGTGACCCCTTACTACAGCGTTGCCTCTCCTGCCC
CGCAAGATGAAGAGCATGCCAGCGGACCAGCCCAAACTTCTCGCGCGGCT
GTGGGAGGGAACCTTCCGTTCCATAAGAAGCTCGCCTACGTGCTCCGCTA
CCACTACAAGGCCTTCATCTACGCCTGCTGTCTCACTTCCTGTCTGGCTA
CCATGGGCCACGGCACCATGGATCTCTACCCGACCTTCCTCGTCAGCCAA
CGCAAATTGAACATCTTGGAAGAGACCTGGGTGACCTGTATCCTGCAGAT
TGGAGGTATCTTGGGCGGCGTGGTCGGCGGGTTCCTTTCCCACAAGGTGA
GCGCTAAGTGGGTGGCGGCAGGCGCAGGACTGCTGATCGCTCCGTGGTTA
CCACTATGGACGCTGCCCACGAGATGGGGACTTCTCGCCCTGGGAGCCTT
CTTTTTGCAATTTTTCTACGGCGCTGCAATCGGTAACTTGGGAAACTTGT
TGCAACAGCTGTGTCCTCATCCTGGTATCAGAGCCGCCTTTACTGGTGTC
GCATACAACATCGGTAATGCAGTGTCGTCGATCGCACCGACGATTGAGAC
GTCGCTGGGAGAGCGGTTCCCGACTGCGGACGGGTCACCGGATTATGCGA
AGACGCAGATGATCCTTGTCGGGATTGCGTTGCTTACGGTGGTACATATG
GTCTCGCCATGGCAACGGTGCTGGAAGCGGTGCCGGAAAAGTCCCGCGGT
GTGGTGGCTGGCTTCACGCAGCAAGGCTTCTCGTCCGGTTATCTCTTTGC
ATCTGGCTTGCATCTGGCCATGAATGAACATTCTTGCCACTCTCGCCGGT
CTCCCCAGGGAGATTGGCTCTACGCTGCACATGAAGCCTGTCCAGGCGTT
GATCTGGCTGGCTTGCTGGGCGTGCTGGACGCTGGGCTCTCTGCAATACT
ATGCCCTCCCGTTCACTCTCAGCACCGTGGCGGAAGCGCTCGACGTGGCG
GAAACCAACGTCTCAGAGGCCAACACCACTACGATGCTGTCCCGTGCTGT
AGGGGCAGTCATCTTTGGTATCCTGTCTGATCAATACGGGCGGAAGATTC
CCATGCTCATTGACCTGGTTCTCATGTGCGGCTTCACTGTCGCAACGGGG
TTCTCGCAGACCTTTCCCCAGTTGATCGGATTCCGGTTCCTCTTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007698-T1.utr3p1 | KJC3_007698-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007698-T1.utr5p1 | KJC3_007698-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_5.4 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3147652..3150084 - |
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