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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3154295..3156976+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007702-T2 ID=KJC3_007702-T2|Name=KJC3_007702-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2682bp|location=Sequence derived from alignment at ch5:3154295..3156976+ (Aspergillus niger KJC3)
CAGTTTACAGCGCGAGGATATCCAATCCCGTTGTTCATTATACCCTCTAA
GCTCCGTATCTCGGGAATTCCCTCGCTTAATTCCCTCCCTGCACGGTCTC
CCCGCAAATGTCAGATCGCGACACTGCGTCATGCTGGCTGTGCCCCCAAC
TAGCTGCTCTTGGCTCCCCCAGATTATCGGCCCCCTGCTGTCTCTGAATT
AGCCTGTCCTGGCCCACGCTGCTTTACAGTCCGCTCCCCTCTCATATCCT
TCGAACTGTCTATTTCTCCGAGCAAGGTCGGCCATGTGCGGAAATGGGTC
CCAAGCGCCAGTCTTCTCCGACCACCCCCCGGGCCTGTCAATTCTGTCGC
GTCCGCAAGATCCGTTGTGACAACGAGAAGCCCACCTGCGGCTCCTGTCA
GCGTCATGATCGACAATGTGTCTATGTGGTCGACCCACCCCGCCAGAGGT
AGGTGTTCTTCCCACCTGGACGCCTCTCGCCATCCATGGCTGCAATTATC
TTGCCACGCATGCGCTGACGCTGCTGCTCCAGGCCGTCCCGGGCTCTCAT
CAATGCCGCTCACCGCCAGAGGCGTGCGGCGGAGAACGTGATTATTGCTT
TGAAGAAGGCTGATCCAGTTGCTCGAACTGCTATCCTTGATTCTATCCAT
GTCAAGGACGGAGTCCTGCAACTACCGGCATCATTGGCCGGCCTCGATGC
TAATATCAACGACACTCCGGTATCTCAACCCACCCAAGCCTCGGACAATA
GCTCGAACGTGTACAGTACGCCAAATGACGAGCTGAATGAGAGTAGCTCC
GAAGATGATGACTACGATCCCACCACCTTTCTCTCCCGGGACGAATGCGG
CACTGTCGGCATCTTTGGCCCGTCGTCGGCGTTGCATGCCCGGAGCCCTC
TCGGCCTAGCCAGCAGTGCCAACTCACGGCCTGCTGCAGAGCCAGACCGA
TATCAACTTATCGCCGAGGCCGCCCTCCAGCGCCAACGTGAGCCTGATCT
ACGTCGGTTACCGACCATTGGAGGGATACCGTCCGAGTTGGCTTTGCATC
TGCTTGATCTACACTGGAACCGGCAGCATCACACATTCCTACTAACATAT
CGTCCAGCATTCATGCGTGATCTCGTCACTGGCGGCCCGTACTGCTCGGA
CTTTCTGCTCAACGCCGTCTTCGCTTGTTCGAGCAAGTTCTCAACACGGG
TCGAGGTGCGGGAAGATCCGCAACGGCCCGAATCGGCCGGCAAACGGTTC
TTCGATCGGTGTGATCAACTGCTGGCAGAACAGTCGCTCTTGACGCATTC
GAGCATCCCGACCATTGCCGGATTAATCATGCTTGGCAGCACCTTCAATG
CCCGGGGACAGACTTCCAAAGGCTGGCTCTACACGGGATTTGCTCTGCGC
ATGGTATACGACCTCGGCTTGCATTTGGACTGCAAGGAGGTTGCTGCCAG
TGCGGAGGATATCGAGGTCCGACGCCGTGTCTTTTGGGCAGCCTTTATCT
GTGATAAGCTCCAGAGCTTGTATTTTGGACGGCCTTTCACAATTCAGCTA
CGTGATGCGCATGTGTCGCGAGACTTCATGGATACCTTTGAAGAGAACGA
GTTATGGATGCCGTATATCGACCCCCTCAAGCCAGACAATACTGCCCGCT
CTCACGTGCCCACTCGCATTTACTCCGTGACCGTGTTTCAGCAACTATGT
TCTCTGTCCAAGATTATGACCAGCATTATTGACCGCTTCTACATGGCTGG
TGCCACTGGCAGCAAGACACGCAAGCATCTGGAGCTTATTGACCGTCGTC
TTGAGATTTGGTATCGTAAATTGCCAGCAGAGCTGCGATATGAGCCCTGG
GCAGATGATGGCCAATCGCCGCACGCCACTGTAGCACCCAATGTCATTAT
CCTGCTAACTACCTACAATGCCCTCATCATTCTACTCCATCGTCCGTTCA
TGGGTAGTGGGCATCTGCGCTCCGACGACCCGCCCGCGGACTCCTGGGAG
CGTTGTGTCACGGCTGCCCGCAACATCACCAGCCTGGCGCTGGCCTATCG
ATCAGCCTACTCCCTGCGTCGAGCCAACTACATGCTCAGCTACGCGGTAT
ATGTAGCCTGCACTATTCATGCGCGCAATCCGGCCATCCGAGAAAGCACT
CGCCGCAAGGAAGCGTCATCTCCGCTGACAGTATGTCTACGTTGTTTGGA
CGAGCTGGCCATCCCCAATTGCGGCGTCTCGGCGCCGTCGAAGATTATTC
GCCGGCTCATGGAAGCCAACGGCATGTCCATTCAGACTGGTAAGGAGCCT
ACGCACTCTTCAACAAATACCGACGTCACTAACGACGTTCAGGATGTGAC
CCGGCTATTCAGGATCCCTTCCAGGTAGATATAAATTTAGATTTCCAAAC
CTTTCCCGGTCTGGATTTCAGCCCTGCGCGACTCGATCATGCCAACCACA
TCTCTGGCTTCCAGGACTTCAACCAGGACCTGGACCTGCTGTTCGGGTTC
ATGAACGAGCCCGACGTGTCCATGTCCTCCATGTTCACTGGGGTTGTACC
CTATTAGCGACGTGTATATGGACCTCACTTTCGACAGAACCGTCATTCAA
TCAAACACATAAAGTACATAACATCATGAAAACATCATATCGTAACTGAA
TGAGCTCACTCCAGAACACTCGGATCTTCCTT back to topCoding sequence (CDS) from alignment at ch5:3154295..3156976+ >KJC3_007702-T2 ID=KJC3_007702-T2|Name=KJC3_007702-T2|organism=Aspergillus niger KJC3|type=CDS|length=5337bp|location=Sequence derived from alignment at ch5:3154295..3156976+ (Aspergillus niger KJC3)
ATGTCAAGGACGGAGTCCTGCAACTACCGGCATCATTGGCCGGCCTCGAT
GCTAATATCAACGACACTCCGCTCCGAAGATGATGACTACGATCCCACCA
CCTTTCTCTCCCGGGACGAATGCGGCACTGTCGGCATCTTTGGCCCGTCG
TCGGCGTTGCATGCCCGGAGCCCTCTCGGCCTAGCCAGCAGTGCCAACTC
ACGGCCTGCTGCAGAGCCAGACCGATATCAACTTATCGCCGAGGCCGCCC
TCCAGCGCCAACGTGAGCCTGATCTACGTCGGTTACCGACCATTGGAGGG
ATACCGTCCGAGTTGGCTTTGCATCTGCTTGATCTACACTGGAACCGGCA
GCATCACACATTCCTACTAACATATCGTCCAGCATTCATGCGTGATCTCG
TCACTGGCGGCCCGTACTGCTCGGACTTTCTGCTCAACGCCGTCTTCGCT
TGTTCGAGCAAGTTCTCAACACGGGTCGAGGTGCGGGAAGATCCGCAACG
GCCCGAATCGGCCGGCAAACGGTTCTTCGATCGGTGTGATCAACTGCTGG
CAGAACAGTCGCTCTTGACGCATTCGAGCATCCCGACCATTGCCGGATTA
ATCATGCTTGGCAGCACCTTCAATGCCCGGGGACAGACTTCCAAAGGCTG
GCTCTACACGGGATTTGCTCTGCGCATGGTATACGACCTCGGCTTGCATT
TGGACTGCAAGGAGGTTGCTGCCAGTGCGGAGGATATCGAGGTCCGACGC
CGTGTCTTTTGGGCAGCCTTTATCTGTGATAAGCTCCAGAGCTTGTATTT
TGGACGGCCTTTCACAATTCAGCTACGTGATGCGCATGTGTCGCGAGACT
TCATGGATACCTTTGAAGAGAACGAGTTATGGATGCCGTATATCGACCCC
CTCAAGCCAGACAATACTGCCCGCTCTCACGTGCCCACTCGCATTTACTC
CGTGACCGTGTTTCAGCAACTATGTTCTCTGTCCAAGATTATGACCAGCA
TTATTGACCGCTTCTACATGGCTGGTGCCACTGGCAGCAAGACACGCAAG
CATCTGGAGCTTATTGACCGTCGTCTTGAGATTTGGTATCGTAAATTGCC
AGCAGAGCTGCGATATGAGCCCTGGGCAGATGATGGCCAATCGCCGCACG
CCACTGTAGCACCCAATGTCATTATCCTGCTAACTACCTACAATGCCCTC
ATCATTCTACTCCATCGTCCGTTCATGGGTAGTGGGCATCTGCGCTCCGA
CGACCCGCCCGCGGACTCCTGGGAGCGTTGTGTCACGGCTGCCCGCAACA
TCACCAGCCTGGCGCTGGCCTATCGATCAGCCTACTCCCTGCGTCGAGCC
AACTACATGCTCAGCTACGCGGTATATGTAGCCTGCACTATTCATGCGCG
CAATCCGGCCATCCGAGAAAGCACTCGCCGCAAGGAAGCGTCATCTCCGC
TGACAGTATGTCTACGTTGTTTGGACGAGCTGGCCATCCCCAATTGCGGC
GTCTCGGCGCCGTCGAAGATTATTCGCCGGCTCATGGAAGCCAACGGCAT
GTCCATTCAGACTGGATGTGACCCGGCTATTCAGGATCCCTTCCAGGTAG
ATATAAATTTAGATTTCCAAACCTTTCCCGGTCTGGATTTCAGCCCTGCG
CGACTCGATCATGCCAACCACATCTCTGGCTTCCAGGACTTCAACCAGGA
CCTGGACCTGCTGTTCGGGTTCATGAACGAGCCCGACGTGTCCATGTCCT
CCATGTTCACTGGGGTTGTACCCTATTAGATGTCAAGGACGGAGTCCTGC
AACTACCGGCATCATTGGCCGGCCTCGATGCTAATATCAACGACACTCCG
CTCCGAAGATGATGACTACGATCCCACCACCTTTCTCTCCCGGGACGAAT
GCGGCACTGTCGGCATCTTTGGCCCGTCGTCGGCGTTGCATGCCCGGAGC
CCTCTCGGCCTAGCCAGCAGTGCCAACTCACGGCCTGCTGCAGAGCCAGA
CCGATATCAACTTATCGCCGAGGCCGCCCTCCAGCGCCAACGTGAGCCTG
ATCTACGTCGGTTACCGACCATTGGAGGGATACCGTCCGAGTTGGCTTTG
CATCTGCTTGATCTACACTGGAACCGGCAGCATCACACATTCCTACTAAC
ATATCGTCCAGCATTCATGCGTGATCTCGTCACTGGCGGCCCGTACTGCT
CGGACTTTCTGCTCAACGCCGTCTTCGCTTGTTCGAGCAAGTTCTCAACA
CGGGTCGAGGTGCGGGAAGATCCGCAACGGCCCGAATCGGCCGGCAAACG
GTTCTTCGATCGGTGTGATCAACTGCTGGCAGAACAGTCGCTCTTGACGC
ATTCGAGCATCCCGACCATTGCCGGATTAATCATGCTTGGCAGCACCTTC
AATGCCCGGGGACAGACTTCCAAAGGCTGGCTCTACACGGGATTTGCTCT
GCGCATGGTATACGACCTCGGCTTGCATTTGGACTGCAAGGAGGTTGCTG
CCAGTGCGGAGGATATCGAGGTCCGACGCCGTGTCTTTTGGGCAGCCTTT
ATCTGTGATAAGCTCCAGAGCTTGTATTTTGGACGGCCTTTCACAATTCA
GCTACGTGATGCGCATGTGTCGCGAGACTTCATGGATACCTTTGAAGAGA
ACGAGTTATGGATGCCGTATATCGACCCCCTCAAGCCAGACAATACTGCC
CGCTCTCACGTGCCCACTCGCATTTACTCCGTGACCGTGTTTCAGCAACT
ATGTTCTCTGTCCAAGATTATGACCAGCATTATTGACCGCTTCTACATGG
CTGGTGCCACTGGCAGCAAGACACGCAAGCATCTGGAGCTTATTGACCGT
CGTCTTGAGATTTGGTATCGTAAATTGCCAGCAGAGCTGCGATATGAGCC
CTGGGCAGATGATGGCCAATCGCCGCACGCCACTGTAGCACCCAATGTCA
TTATCCTGCTAACTACCTACAATGCCCTCATCATTCTACTCCATCGTCCG
TTCATGGGTAGTGGGCATCTGCGCTCCGACGACCCGCCCGCGGACTCCTG
GGAGCGTTGTGTCACGGCTGCCCGCAACATCACCAGCCTGGCGCTGGCCT
ATCGATCAGCCTACTCCCTGCGTCGAGCCAACTACATGCTCAGCTACGCG
GTATATGTAGCCTGCACTATTCATGCGCGCAATCCGGCCATCCGAGAAAG
CACTCGCCGCAAGGAAGCGTCATCTCCGCTGACAGTATGTCTACGTTGTT
TGGACGAGCTGGCCATCCCCAATTGCGGCGTCTCGGCGCCGTCGAAGATT
ATTCGCCGGCTCATGGAAGCCAACGGCATGTCCATTCAGACTGGATGTGA
CCCGGCTATTCAGGATCCCTTCCAGGTAGATATAAATTTAGATTTCCAAA
CCTTTCCCGGTCTGGATTTCAGCCCTGCGCGACTCGATCATGCCAACCAC
ATCTCTGGCTTCCAGGACTTCAACCAGGACCTGGACCTGCTGTTCGGGTT
CATGAACGAGCCCGACGTGTCCATGTCCTCCATGTTCACTGGGGTTGTAC
CCTATTAGATGTCAAGGACGGAGTCCTGCAACTACCGGCATCATTGGCCG
GCCTCGATGCTAATATCAACGACACTCCGCTCCGAAGATGATGACTACGA
TCCCACCACCTTTCTCTCCCGGGACGAATGCGGCACTGTCGGCATCTTTG
GCCCGTCGTCGGCGTTGCATGCCCGGAGCCCTCTCGGCCTAGCCAGCAGT
GCCAACTCACGGCCTGCTGCAGAGCCAGACCGATATCAACTTATCGCCGA
GGCCGCCCTCCAGCGCCAACGTGAGCCTGATCTACGTCGGTTACCGACCA
TTGGAGGGATACCGTCCGAGTTGGCTTTGCATCTGCTTGATCTACACTGG
AACCGGCAGCATCACACATTCCTACTAACATATCGTCCAGCATTCATGCG
TGATCTCGTCACTGGCGGCCCGTACTGCTCGGACTTTCTGCTCAACGCCG
TCTTCGCTTGTTCGAGCAAGTTCTCAACACGGGTCGAGGTGCGGGAAGAT
CCGCAACGGCCCGAATCGGCCGGCAAACGGTTCTTCGATCGGTGTGATCA
ACTGCTGGCAGAACAGTCGCTCTTGACGCATTCGAGCATCCCGACCATTG
CCGGATTAATCATGCTTGGCAGCACCTTCAATGCCCGGGGACAGACTTCC
AAAGGCTGGCTCTACACGGGATTTGCTCTGCGCATGGTATACGACCTCGG
CTTGCATTTGGACTGCAAGGAGGTTGCTGCCAGTGCGGAGGATATCGAGG
TCCGACGCCGTGTCTTTTGGGCAGCCTTTATCTGTGATAAGCTCCAGAGC
TTGTATTTTGGACGGCCTTTCACAATTCAGCTACGTGATGCGCATGTGTC
GCGAGACTTCATGGATACCTTTGAAGAGAACGAGTTATGGATGCCGTATA
TCGACCCCCTCAAGCCAGACAATACTGCCCGCTCTCACGTGCCCACTCGC
ATTTACTCCGTGACCGTGTTTCAGCAACTATGTTCTCTGTCCAAGATTAT
GACCAGCATTATTGACCGCTTCTACATGGCTGGTGCCACTGGCAGCAAGA
CACGCAAGCATCTGGAGCTTATTGACCGTCGTCTTGAGATTTGGTATCGT
AAATTGCCAGCAGAGCTGCGATATGAGCCCTGGGCAGATGATGGCCAATC
GCCGCACGCCACTGTAGCACCCAATGTCATTATCCTGCTAACTACCTACA
ATGCCCTCATCATTCTACTCCATCGTCCGTTCATGGGTAGTGGGCATCTG
CGCTCCGACGACCCGCCCGCGGACTCCTGGGAGCGTTGTGTCACGGCTGC
CCGCAACATCACCAGCCTGGCGCTGGCCTATCGATCAGCCTACTCCCTGC
GTCGAGCCAACTACATGCTCAGCTACGCGGTATATGTAGCCTGCACTATT
CATGCGCGCAATCCGGCCATCCGAGAAAGCACTCGCCGCAAGGAAGCGTC
ATCTCCGCTGACAGTATGTCTACGTTGTTTGGACGAGCTGGCCATCCCCA
ATTGCGGCGTCTCGGCGCCGTCGAAGATTATTCGCCGGCTCATGGAAGCC
AACGGCATGTCCATTCAGACTGGATGTGACCCGGCTATTCAGGATCCCTT
CCAGGTAGATATAAATTTAGATTTCCAAACCTTTCCCGGTCTGGATTTCA
GCCCTGCGCGACTCGATCATGCCAACCACATCTCTGGCTTCCAGGACTTC
AACCAGGACCTGGACCTGCTGTTCGGGTTCATGAACGAGCCCGACGTGTC
CATGTCCTCCATGTTCACTGGGGTTGTACCCTATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007702-T2.utr3p1 | KJC3_007702-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3154295..3156976 + |
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