KJC3_007716-T1, KJC3_007716-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_007716-T1
Unique Name	KJC3_007716-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch5:3185421..3188295-
coding sequence from alignment at ch5:3185421..3188295-

mRNA from alignment at ch5:3185421..3188295-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_007716-T1 ID=KJC3_007716-T1|Name=KJC3_007716-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2875bp|location=Sequence derived from alignment at ch5:3185421..3188295- (Aspergillus niger KJC3)
AGCTCCCCGATCGATCGATGAGGAGGGGTTATCGCCATTCAGGGCCCAAT
AACTCACGATGATCGGTGACGATGACCACAGAGGACCGTCATTGAGCGGG
GATGTATAGTGGGTTATACCGCGGACCAGGGCCAACCAGCGAAGCATTTG
GGGGATCAGGCCAGGAACCAAACCCTGTTGCGTGTCGATTCCTTTGCCTC
TCAAGCTTTCCGACAAGCCCCATGAGGATCCACCCATGACGCCAGTCTTT
CCCATGTCTTCAACGCTCCCCGATAGTCTGCCCGCACCACCGCAACCCAC
TGGCCTGTACTTTTTGTAGATCTCGCGCATCAATGCTCAATGGCCGGTGT
GGATGCGCTCGCTTACGCCCTCGCTGCAGTCTCTGGTCCAGTCGGAGATG
CGGAGAGGGCGCCAGCAAGTCGTCATCATGTTTGCTGCTCCTTCACGCCA
TTCTTTCTTCTCCTGTCTTTTATTGTTCCCCTACTCCTGTTGCTCACTGG
CCAATTTTTCAACGTCTGGAACATCAGCTGGGCGTCTTGAGTGTGTCACG
CAGCCATTGCTTCCAGTTGAGTCGGCCATCCGCATCCCGTCCATTATTCG
CATCCCATCGACAGGAGCAATTTTATCACCCTTCGAATAAGCACATAGCA
TCTATCTCCGTCACAATATGGACGACGGGGAGACCAGGCGCCCACGGGCA
ACGGTATGTTCACTCGTATTCTCCTTCAGCTGAGCCAGGAGCTGATCGGA
GTAATCTCCTCGCTTGAGCAGTCTGATGCGATCTCCCCCCGAGGAGAGAA
CCCTCCCACTTCACCTCTATCACCTACTCGCGGCCGCCGAGGGACTGCTG
GTGACGCTGACTTTGTTTCTCCCACCCGCCGCGTCTCTGGCCGTGATGGC
TCCGGGGCTGGAGTTCGTCGACGCAGCTCCGCCGCCTCCCGTCGCAGTGG
TGGAAGTGGCATCCCCAGTTTGGCGCCACGCACCACGCTGGCTGGACGAA
CCCAAGGTCGTTTCACCATGGCTGGCCCAGAAGAGACGCCTCAGCTGCGC
TTGGCCCATGAACCGTTTGTGCAACCGGGCTATGGCGATCTAAACCCATC
CTACGAACAGCCCGCCAACTCCAAACCTGTCTGGGGTCTGGCGAAACCGC
TCCCTCGTGTCGTCCGACCGGGCATGGTGCCGACCAAGGAGGAGCTGTTG
GAAGCCCGTCAAAATATTCAGCTGCCGGCAGAAAATTCACAGAAGCTAGG
GCTGGAGGTCGACCCCAATGACCTAGAGCTGGGCCAAATCGAGAAGACGG
CTGACCCTCGTAAAATGGCGGCCCAGGTGGAAGATGCCCGCATCCAGCGT
GAGAACAACTTCATGAACAAGATTCTGAGTGGGGATGCCACCACAACGCG
ACAAGGCTCGCGCCTCTCGCGGACTTCATCGTCGCGTATCCGCCGCCCAT
CGGCCTGGGATCTCCCGCCTGAGAATCTCTCGACGGTGCCCGAAGGCGAG
ACCCCGGCTCCCAGTGAGACCCATGAGGAACCCCCTCAGATGAGTAGTGA
GGAGCCCTTGGAGCCCGTCCTGGAGGAGCCCGAGCTGCGCGCTGACGATG
GCAAGGACGGGATGATGGACGACCTGCCCAATCTGGAGGAGATCGAGGCC
GCCTATCCGGAAGATCTGCATCCGCTGGTACAGGAGCTGGTGGAGGAGGA
GGTGCACAACAACCACACCACCTGGTCCGTCATCCGCACTCATCACCGCG
AAGCCCTGGCCGAGTCCCTGGGGGTCTTCGTGCAGCTGTTCGTCGGCTTT
TGCGGCGATCTAGCAGTGACCGTGGCCAACGCCGGTAATCCCAACACCAC
CGACTGGGTCTGGGGGTTTGCTACCATGATGGCCATCTACGTCTCCGGTG
GTGTGTCCGGTGCACATCTCAATCCGACCATCACCATTATGCTATGGTTT
TACCGCGGTTTCCCCAAGAGCAAGATGCCCGAGTACTTCGCCGCGCAATT
CTTGGGGGCCTTCATCGCCGCGCTCGCCGCGTACGGTCTCTACTATCACT
CCATCCAACACTATCTCCTGACCAACTCCACCACGGGCATCATCACCAGC
TTTGTGACAAGTCAGCGCGAGACCTGGATCGGTCCTGGTACTGCCTTCTT
TACCGAATTTCTGGGCACGATGATACTGACGGTGGTGGTCCTGGCGCTGG
GTGACGATCAGAACGCACCCCCGGGAGCGGGTATGAACTCACTCATCGTG
GGTCTCATGGTGACCTGCAACACGATGAGCTTTGCCTACCAGACGGGTGC
CGCCTTGAATCCGAGTCGAGACTTTGGGCCCCGATTAGCGTTGCTGGCTC
TTGGGTACGGCTCGTCGCTGTTCACCAATCCGTACTGGTTTTACGGACCA
TGGGCCGGATCACTCGCGGGCTCCTTCCTCGGTGCCTTCCTGTACGACTT
TATGATCTTTACGGGTGGTGAATCGCCGGTCAACTACCCCTGGGAACGGA
CGCAGCGGGCGATGCGAAAGAGTCGGATGAAGTGGGGGAAGCGGTTGCAT
CTGTCACGCCGAGACAGGGGAGAGAAGACTGTTCGTTGAACAGCAGCGGC
GTAGACAAAGGGGAATTCGAATTTAGTGCAGAATGTTTCACCAGATTGTT
TGAGAAAGCCTTGCTACGTGCATGCGGGATGCATACTAGTGATGTTTGTA
GTTACATGATACACTCATATTGACAGCAATAAGCGATGAACGTTGTACAT
ACGCATTGATGATTCGGATTCTGGACACAATATATATATTGTATATAGTT
CAAATACTTTCTTAGTATTTTTATAATCTCAGCATCACAACTCATGGCAA
GGTAGTGCTACTACTTAATAGCCCC

Coding sequence (CDS) from alignment at ch5:3185421..3188295-

>KJC3_007716-T1 ID=KJC3_007716-T1|Name=KJC3_007716-T1|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch5:3185421..3188295- (Aspergillus niger KJC3)
TCTGATGCGATCTCCCCCCGAGGAGAGAACCCTCCCACTTCACCTCTATC
ACCTACTCGCGGCCGCCGAGGGACTGCTGGTGACGCTGACTTTGTTTCTC
CCACCCGCCGCGTCTCTGGCCGTGATGGCTCCGGGGCTGGAGTTCGTCGA
CGCAGCTCCGCCGCCTCCCGTCGCAGTGGTGGAAGTGGCATCCCCAGTTT
GGCGCCACGCACCACGCTGGCTGGACGAACCCAAGGTCGTTTCACCATGG
CTGGCCCAGAAGAGACGCCTCAGCTGCGCTTGGCCCATGAACCGTTTGTG
CAACCGGGCTATGGCGATCTAAACCCATCCTACGAACAGCCCGCCAACTC
CAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCTCGTGTCGTCCGACCGG
GCATGGTGCCGACCAAGGAGGAGCTGTTGGAAGCCCGTCAAAATATTCAG
CTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGGAGGTCGACCCCAATGA
CCTAGAGCTGGGCCAAATCGAGAAGACGGCTGACCCTCGTAAAATGGCGG
CCCAGGTGGAAGATGCCCGCATCCAGCGTGAGAACAACTTCATGAACAAG
ATTCTGAGTGGGGATGCCACCACAACGCGACAAGGCTCGCGCCTCTCGCG
GACTTCATCGTCGCGTATCCGCCGCCCATCGGCCTGGGATCTCCCGCCTG
AGAATCTCTCGACGGTGCCCGAAGGCGAGACCCCGGCTCCCAGTGAGACC
CATGAGGAACCCCCTCAGATGAGTAGTGAGGAGCCCTTGGAGCCCGTCCT
GGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAGGACGGGATGATGGACG
ACCTGCCCAATCTGGAGGAGATCGAGGCCGCCTATCCGGAAGATCTGCAT
CCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGCACAACAACCACACCAC
CTGGTCCGTCATCCGCACTCATCACCGCGAAGCCCTGGCCGAGTCCCTGG
GGGTCTTCGTGCAGCTGTTCGTCGGCTTTTGCGGCGATCTAGCAGTGACC
GTGGCCAACGCCGGTAATCCCAACACCACCGACTGGGTCTGGGGGTTTGC
TACCATGATGGCCATCTACGTCTCCGGTGGTGTGTCCGGTGCACATCTCA
ATCCGACCATCACCATTATGCTATGGTTTTACCGCGGTTTCCCCAAGAGC
AAGATGCCCGAGTACTTCGCCGCGCAATTCTTGGGGGCCTTCATCGCCGC
GCTCGCCGCGTACGGTCTCTACTATCACTCCATCCAACACTATCTCCTGA
CCAACTCCACCACGGGCATCATCACCAGCTTTGTGACAAGTCAGCGCGAG
ACCTGGATCGGTCCTGGTACTGCCTTCTTTACCGAATTTCTGGGCACGAT
GATACTGACGGTGGTGGTCCTGGCGCTGGGTGACGATCAGAACGCACCCC
CGGGAGCGGGTATGAACTCACTCATCGTGGGTCTCATGGTGACCTGCAAC
ACGATGAGCTTTGCCTACCAGACGGGTGCCGCCTTGAATCCGAGTCGAGA
CTTTGGGCCCCGATTAGCGTTGCTGGCTCTTGGGTACGGCTCGTCGCTGT
TCACCAATCCGTACTGGTTTTACGGACCATGGGCCGGATCACTCGCGGGC
TCCTTCCTCGGTGCCTTCCTGTACGACTTTATGATCTTTACGGGTGGTGA
ATCGCCGGTCAACTACCCCTGGGAACGGACGCAGCGGGCGATGCGAAAGA
GTCGGATGAAGTGGGGGAAGCGGTTGCATCTGTCACGCCGAGACAGGGGA
GAGAAGACTGTTCGTTGAATGGACGACGGGGAGACCAGGCGCCCACGGGC
AACGTCTGATGCGATCTCCCCCCGAGGAGAGAACCCTCCCACTTCACCTC
TATCACCTACTCGCGGCCGCCGAGGGACTGCTGGTGACGCTGACTTTGTT
TCTCCCACCCGCCGCGTCTCTGGCCGTGATGGCTCCGGGGCTGGAGTTCG
TCGACGCAGCTCCGCCGCCTCCCGTCGCAGTGGTGGAAGTGGCATCCCCA
GTTTGGCGCCACGCACCACGCTGGCTGGACGAACCCAAGGTCGTTTCACC
ATGGCTGGCCCAGAAGAGACGCCTCAGCTGCGCTTGGCCCATGAACCGTT
TGTGCAACCGGGCTATGGCGATCTAAACCCATCCTACGAACAGCCCGCCA
ACTCCAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCTCGTGTCGTCCGA
CCGGGCATGGTGCCGACCAAGGAGGAGCTGTTGGAAGCCCGTCAAAATAT
TCAGCTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGGAGGTCGACCCCA
ATGACCTAGAGCTGGGCCAAATCGAGAAGACGGCTGACCCTCGTAAAATG
GCGGCCCAGGTGGAAGATGCCCGCATCCAGCGTGAGAACAACTTCATGAA
CAAGATTCTGAGTGGGGATGCCACCACAACGCGACAAGGCTCGCGCCTCT
CGCGGACTTCATCGTCGCGTATCCGCCGCCCATCGGCCTGGGATCTCCCG
CCTGAGAATCTCTCGACGGTGCCCGAAGGCGAGACCCCGGCTCCCAGTGA
GACCCATGAGGAACCCCCTCAGATGAGTAGTGAGGAGCCCTTGGAGCCCG
TCCTGGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAGGACGGGATGATG
GACGACCTGCCCAATCTGGAGGAGATCGAGGCCGCCTATCCGGAAGATCT
GCATCCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGCACAACAACCACA
CCACCTGGTCCGTCATCCGCACTCATCACCGCGAAGCCCTGGCCGAGTCC
CTGGGGGTCTTCGTGCAGCTGTTCGTCGGCTTTTGCGGCGATCTAGCAGT
GACCGTGGCCAACGCCGGTAATCCCAACACCACCGACTGGGTCTGGGGGT
TTGCTACCATGATGGCCATCTACGTCTCCGGTGGTGTGTCCGGTGCACAT
CTCAATCCGACCATCACCATTATGCTATGGTTTTACCGCGGTTTCCCCAA
GAGCAAGATGCCCGAGTACTTCGCCGCGCAATTCTTGGGGGCCTTCATCG
CCGCGCTCGCCGCGTACGGTCTCTACTATCACTCCATCCAACACTATCTC
CTGACCAACTCCACCACGGGCATCATCACCAGCTTTGTGACAAGTCAGCG
CGAGACCTGGATCGGTCCTGGTACTGCCTTCTTTACCGAATTTCTGGGCA
CGATGATACTGACGGTGGTGGTCCTGGCGCTGGGTGACGATCAGAACGCA
CCCCCGGGAGCGGGTATGAACTCACTCATCGTGGGTCTCATGGTGACCTG
CAACACGATGAGCTTTGCCTACCAGACGGGTGCCGCCTTGAATCCGAGTC
GAGACTTTGGGCCCCGATTAGCGTTGCTGGCTCTTGGGTACGGCTCGTCG
CTGTTCACCAATCCGTACTGGTTTTACGGACCATGGGCCGGATCACTCGC
GGGCTCCTTCCTCGGTGCCTTCCTGTACGACTTTATGATCTTTACGGGTG
GTGAATCGCCGGTCAACTACCCCTGGGAACGGACGCAGCGGGCGATGCGA
AAGAGTCGGATGAAGTGGGGGAAGCGGTTGCATCTGTCACGCCGAGACAG
GGGAGAGAAGACTGTTCGTTGAATGGACGACGGGGAGACCAGGCGCCCAC
GGGCAACG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015267	channel activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_007716	KJC3_007716	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007716-T1	KJC3_007716-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007716-T1.cds	KJC3_007716-T1.cds	Aspergillus niger KJC3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007716-T1.utr3p1	KJC3_007716-T1.utr3p1	Aspergillus niger KJC3	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007716-T1.exon2	KJC3_007716-T1.exon2	Aspergillus niger KJC3	exon
KJC3_007716-T1.exon1	KJC3_007716-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_007716-T1.utr5p1	KJC3_007716-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR023271
DBxref	InterPro:IPR000425
DBxref	PFAM:PF00230
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch5	supercontig	ch5:3185421..3188295 -

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KJC3_007716-T1, KJC3_007716-T1 (mRNA) Aspergillus niger KJC3