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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:3200825..3202596- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007724-T1 ID=KJC3_007724-T1|Name=KJC3_007724-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1772bp|location=Sequence derived from alignment at ch5:3200825..3202596- (Aspergillus niger KJC3)
CGAAAAATTCCTCCCAGCATAAAATCCGGGGCATGCCCTTGGATCCAGTA
GTAGATGTAGTCCGCTTACCCCTGTTTCCGTCCTTTTCCCTCGCCCCCTC
CCCTCCTCCCCTCCTCCCCTCCATCTATCTATATCGAGGAGGGCCAAGAT
GGGTGCATCCGATCCCATCGCCAACCCCGACTTGGAAAAGGGTCAGCCGC
CGGCGACTGTGCAGCCCACCGAGCGACACCAGGACAACATCGTGGATTAT
GATGGCCCCGATGACCCGGAAAACCCATTCAATTGGCCTCGCTGGAAGAA
AGGGCGCCAGCTAGTTCTAATGGCATTCAACACCTTCATCACGTATGTCT
TGCTGCTTTTCGGTCTTGGCTTTATCATATCCACTTCTTCCGTTCTTGGG
CTAGATGGCTAATGCTACCACATCAGACCCTTGGCTTCCTCCATGTTCGC
CCCCGGAGTGGAGGATGTGATGATCGATTTTCACTCCACCAGTACCATGC
TCGCCTCCTTCGTGGTGTCTGTCTATGTCCTAGGCTATATGATCGGGCCT
TTTCTCATCGCCCCGCTCTCGGAGATTTATGGTCGGGTGTACCTCTATCA
TGCATGCAACATCCTATTCCTTATCTTCACCATCGCCTGCGCCGTGGCCC
AGACCATGCCACAGCTGATTGTCTTTCGTCTGCTGGCTGGCACCGCCGGC
GTTTGCCCCCTCACCATCGGCTCAGGCACCGTGGCCGACATGGTCCCCAA
GGAAAAGCGCGCCGGCATCATGGCCATCTGGGCGATGGGGCCCATCCTCG
GCCCCGTGGTGGGACCGGTAGCTGGTGGCTTTCTCGCCGAAGCTGAAGGC
TGGCGCTGGGTGTTTTGGGTGATTGCGATCGCGGTAAGTCCAAACTTCCA
CTTCCACAATCCCTCACCCGCAAATGCATTGACTGTTTTGTCCATAGACC
GCAGTGATGAGCATTCTCTGCATGATCTGGTATCGCGAAACATATGCCCC
GGTTATTCTGGAGCGGAAAGCGGCCCGGTTACGCAAGGCCACGGGCAATC
CCAACCTGCGTTCAGTCCATGACCGTGGCCAACAGGCGCACGAGCTCCTT
CTGGTCGCATTGGCTCGCCCGGTTAAGCTCCTCGTCAAATCGCCCATTGT
CCTCCTCATGGTGCTCTTTGCCGCCATCACCTATGGCTACTTGTACCTGA
TGTTCACCACCATCACCTCCATCTTCGAGGACGTCTATCATTTCTCCCCG
GGCGTCGCGGGCCTGGCCTACCTGGGATTTGGTGTGGGCTGTCTCATCGG
CCTCGTCATCTGTGGTGCCGTTTCCAATCATATTGCGCGCACCCATTCGG
CCAGGGGTTGTTTTACCCCCGAATCTCGCCTGCCGCCCATGGTCTTCGGC
TGTTGGGCCATCCCCATTGGCTTGTTCTGGTACGGCTGGGCGGCCAAGGC
GCAAACGCACTGGATCGTCCCCATCTTGGGCACGGGCGTCTTTGCCATTG
GCCTGATGACCGTCTTCATGTCGGCCAGTACCTACCTGGTCGACTCCTAC
CTCCGCTACGCGGCCTCGGTGACGGCAGCCAACACGGGTCTACGATCGCT
GGTCGGGGCCCTGTTACCCTTGGCCGGACCTTCCATGTACGATGCCCTGG
GCTTGGGATGGGGCAATTCCCTTCTCGCCTTCATTGCGCTCGTGATGTGC
GCGTGTCCGCTGCTCTTCTGGCGGTACGGGGCACGCATCCGGACGCACCC
TCGATTTCAGGTGAAGTTGTAA back to topCoding sequence (CDS) from alignment at ch5:3200825..3202596- >KJC3_007724-T1 ID=KJC3_007724-T1|Name=KJC3_007724-T1|organism=Aspergillus niger KJC3|type=CDS|length=4428bp|location=Sequence derived from alignment at ch5:3200825..3202596- (Aspergillus niger KJC3)
ACCGCAGTGATGAGCATTCTCTGCATGATCTGGTATCGCGAAACATATGC
CCCGGTTATTCTGGAGCGGAAAGCGGCCCGGTTACGCAAGGCCACGGGCA
ATCCCAACCTGCGTTCAGTCCATGACCGTGGCCAACAGGCGCACGAGCTC
CTTCTGGTCGCATTGGCTCGCCCGGTTAAGCTCCTCGTCAAATCGCCCAT
TGTCCTCCTCATGGTGCTCTTTGCCGCCATCACCTATGGCTACTTGTACC
TGATGTTCACCACCATCACCTCCATCTTCGAGGACGTCTATCATTTCTCC
CCGGGCGTCGCGGGCCTGGCCTACCTGGGATTTGGTGTGGGCTGTCTCAT
CGGCCTCGTCATCTGTGGTGCCGTTTCCAATCATATTGCGCGCACCCATT
CGGCCAGGGGTTGTTTTACCCCCGAATCTCGCCTGCCGCCCATGGTCTTC
GGCTGTTGGGCCATCCCCATTGGCTTGTTCTGGTACGGCTGGGCGGCCAA
GGCGCAAACGCACTGGATCGTCCCCATCTTGGGCACGGGCGTCTTTGCCA
TTGGCCTGATGACCGTCTTCATGTCGGCCAGTACCTACCTGGTCGACTCC
TACCTCCGCTACGCGGCCTCGGTGACGGCAGCCAACACGGGTCTACGATC
GCTGGTCGGGGCCCTGTTACCCTTGGCCGGACCTTCCATGTACGATGCCC
TGGGCTTGGGATGGGGCAATTCCCTTCTCGCCTTCATTGCGCTCGTGATG
TGCGCGTGTCCGCTGCTCTTCTGGCGGTACGGGGCACGCATCCGGACGCA
CCCTCGATTTCAGGTGAAGTTGTAAACCCTTGGCTTCCTCCATGTTCGCC
CCCGGAGTGGAGGATGTGATGATCGATTTTCACTCCACCAGTACCATGCT
CGCCTCCTTCGTGGTGTCTGTCTATGTCCTAGGCTATATGATCGGGCCTT
TTCTCATCGCCCCGCTCTCGGAGATTTATGGTCGGGTGTACCTCTATCAT
GCATGCAACATCCTATTCCTTATCTTCACCATCGCCTGCGCCGTGGCCCA
GACCATGCCACAGCTGATTGTCTTTCGTCTGCTGGCTGGCACCGCCGGCG
TTTGCCCCCTCACCATCGGCTCAGGCACCGTGGCCGACATGGTCCCCAAG
GAAAAGCGCGCCGGCATCATGGCCATCTGGGCGATGGGGCCCATCCTCGG
CCCCGTGGTGGGACCGGTAGCTGGTGGCTTTCTCGCCGAAGCTGAAGGCT
GGCGCTGGGTGTTTTGGGTGATTGCGATCGCGATGGGTGCATCCGATCCC
ATCGCCAACCCCGACTTGGAAAAGGGTCAGCCGCCGGCGACTGTGCAGCC
CACCGAGCGACACCAGGACAACATCGTGGATTATGATGGCCCCGATGACC
CGGAAAACCCATTCAATTGGCCTCGCTGGAAGAAAGGGCGCCAGCTAGTT
CTAATGGCATTCAACACCTTCATCACACCGCAGTGATGAGCATTCTCTGC
ATGATCTGGTATCGCGAAACATATGCCCCGGTTATTCTGGAGCGGAAAGC
GGCCCGGTTACGCAAGGCCACGGGCAATCCCAACCTGCGTTCAGTCCATG
ACCGTGGCCAACAGGCGCACGAGCTCCTTCTGGTCGCATTGGCTCGCCCG
GTTAAGCTCCTCGTCAAATCGCCCATTGTCCTCCTCATGGTGCTCTTTGC
CGCCATCACCTATGGCTACTTGTACCTGATGTTCACCACCATCACCTCCA
TCTTCGAGGACGTCTATCATTTCTCCCCGGGCGTCGCGGGCCTGGCCTAC
CTGGGATTTGGTGTGGGCTGTCTCATCGGCCTCGTCATCTGTGGTGCCGT
TTCCAATCATATTGCGCGCACCCATTCGGCCAGGGGTTGTTTTACCCCCG
AATCTCGCCTGCCGCCCATGGTCTTCGGCTGTTGGGCCATCCCCATTGGC
TTGTTCTGGTACGGCTGGGCGGCCAAGGCGCAAACGCACTGGATCGTCCC
CATCTTGGGCACGGGCGTCTTTGCCATTGGCCTGATGACCGTCTTCATGT
CGGCCAGTACCTACCTGGTCGACTCCTACCTCCGCTACGCGGCCTCGGTG
ACGGCAGCCAACACGGGTCTACGATCGCTGGTCGGGGCCCTGTTACCCTT
GGCCGGACCTTCCATGTACGATGCCCTGGGCTTGGGATGGGGCAATTCCC
TTCTCGCCTTCATTGCGCTCGTGATGTGCGCGTGTCCGCTGCTCTTCTGG
CGGTACGGGGCACGCATCCGGACGCACCCTCGATTTCAGGTGAAGTTGTA
AACCCTTGGCTTCCTCCATGTTCGCCCCCGGAGTGGAGGATGTGATGATC
GATTTTCACTCCACCAGTACCATGCTCGCCTCCTTCGTGGTGTCTGTCTA
TGTCCTAGGCTATATGATCGGGCCTTTTCTCATCGCCCCGCTCTCGGAGA
TTTATGGTCGGGTGTACCTCTATCATGCATGCAACATCCTATTCCTTATC
TTCACCATCGCCTGCGCCGTGGCCCAGACCATGCCACAGCTGATTGTCTT
TCGTCTGCTGGCTGGCACCGCCGGCGTTTGCCCCCTCACCATCGGCTCAG
GCACCGTGGCCGACATGGTCCCCAAGGAAAAGCGCGCCGGCATCATGGCC
ATCTGGGCGATGGGGCCCATCCTCGGCCCCGTGGTGGGACCGGTAGCTGG
TGGCTTTCTCGCCGAAGCTGAAGGCTGGCGCTGGGTGTTTTGGGTGATTG
CGATCGCGATGGGTGCATCCGATCCCATCGCCAACCCCGACTTGGAAAAG
GGTCAGCCGCCGGCGACTGTGCAGCCCACCGAGCGACACCAGGACAACAT
CGTGGATTATGATGGCCCCGATGACCCGGAAAACCCATTCAATTGGCCTC
GCTGGAAGAAAGGGCGCCAGCTAGTTCTAATGGCATTCAACACCTTCATC
ACACCGCAGTGATGAGCATTCTCTGCATGATCTGGTATCGCGAAACATAT
GCCCCGGTTATTCTGGAGCGGAAAGCGGCCCGGTTACGCAAGGCCACGGG
CAATCCCAACCTGCGTTCAGTCCATGACCGTGGCCAACAGGCGCACGAGC
TCCTTCTGGTCGCATTGGCTCGCCCGGTTAAGCTCCTCGTCAAATCGCCC
ATTGTCCTCCTCATGGTGCTCTTTGCCGCCATCACCTATGGCTACTTGTA
CCTGATGTTCACCACCATCACCTCCATCTTCGAGGACGTCTATCATTTCT
CCCCGGGCGTCGCGGGCCTGGCCTACCTGGGATTTGGTGTGGGCTGTCTC
ATCGGCCTCGTCATCTGTGGTGCCGTTTCCAATCATATTGCGCGCACCCA
TTCGGCCAGGGGTTGTTTTACCCCCGAATCTCGCCTGCCGCCCATGGTCT
TCGGCTGTTGGGCCATCCCCATTGGCTTGTTCTGGTACGGCTGGGCGGCC
AAGGCGCAAACGCACTGGATCGTCCCCATCTTGGGCACGGGCGTCTTTGC
CATTGGCCTGATGACCGTCTTCATGTCGGCCAGTACCTACCTGGTCGACT
CCTACCTCCGCTACGCGGCCTCGGTGACGGCAGCCAACACGGGTCTACGA
TCGCTGGTCGGGGCCCTGTTACCCTTGGCCGGACCTTCCATGTACGATGC
CCTGGGCTTGGGATGGGGCAATTCCCTTCTCGCCTTCATTGCGCTCGTGA
TGTGCGCGTGTCCGCTGCTCTTCTGGCGGTACGGGGCACGCATCCGGACG
CACCCTCGATTTCAGGTGAAGTTGTAAACCCTTGGCTTCCTCCATGTTCG
CCCCCGGAGTGGAGGATGTGATGATCGATTTTCACTCCACCAGTACCATG
CTCGCCTCCTTCGTGGTGTCTGTCTATGTCCTAGGCTATATGATCGGGCC
TTTTCTCATCGCCCCGCTCTCGGAGATTTATGGTCGGGTGTACCTCTATC
ATGCATGCAACATCCTATTCCTTATCTTCACCATCGCCTGCGCCGTGGCC
CAGACCATGCCACAGCTGATTGTCTTTCGTCTGCTGGCTGGCACCGCCGG
CGTTTGCCCCCTCACCATCGGCTCAGGCACCGTGGCCGACATGGTCCCCA
AGGAAAAGCGCGCCGGCATCATGGCCATCTGGGCGATGGGGCCCATCCTC
GGCCCCGTGGTGGGACCGGTAGCTGGTGGCTTTCTCGCCGAAGCTGAAGG
CTGGCGCTGGGTGTTTTGGGTGATTGCGATCGCGATGGGTGCATCCGATC
CCATCGCCAACCCCGACTTGGAAAAGGGTCAGCCGCCGGCGACTGTGCAG
CCCACCGAGCGACACCAGGACAACATCGTGGATTATGATGGCCCCGATGA
CCCGGAAAACCCATTCAATTGGCCTCGCTGGAAGAAAGGGCGCCAGCTAG
TTCTAATGGCATTCAACACCTTCATCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007724-T1.utr5p1 | KJC3_007724-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:3200825..3202596 - |
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