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KJC3_007738-T1, KJC3_007738-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007738-T1
Unique NameKJC3_007738-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3238270..3239493+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007738-T1 ID=KJC3_007738-T1|Name=KJC3_007738-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1224bp|location=Sequence derived from alignment at ch5:3238270..3239493+ (Aspergillus niger KJC3)
ATGGGCCTAGTCACCGCATCGGGAGGGAACTACGGCCTTTCTTACCTGAG
CGGATCGAAGCAGTGGCGTGAGTGCTCTATTACTTCCCGTATTCCGTGCT
CAGGCTCAGCCTTGTTATTCAAAAACAGGAATTGAGATCGCCATTCAATT
CGCCCATGCAATCCTTCTTATGATCGCGGGCATCAGCAATCCCGAATCCC
CACGCCATCTCGCCAGGCTCGGCAACCACACTGCGGCACGCACCAGTCTT
GGCCGGCTCCGGGGGCTTGCGGCTGACTCCCCGGAACTCGACGAGGCGAT
AGCTGAAGTGCACATCTGGCTGCTCGAAGACGCGGAGCAGCAGCAGAAAG
CCCGGTTCCGGGAGTGTTTTGAGGGGCCCAACCTGCGTCGCCTCGTACTA
GGCTGCTCCATGGGCTTCCATGCTGAATCGACTGGCATTGTGTTCTTCTT
GTCGTACTCAACCACCTTCCTCGCTGGGGCAGGAATCACCAACGCCTACC
TTATTACCTTTATCATCGGCCTCGTCATGTCGGCCTCTACCCTGCCATCC
ATATATTGCCTTGACCATCTGGGTCGCCGCTCATGCGCCTTTATCGGAGG
GACAATGATGCTCATCGTCTGTATTGTCACAGGGGCAATCCACTCGGCCG
TGCCGCTGTCGGCTGCAAGTCAGCATGCGCTCATTGCGGGGTCGCTTCTC
TTTATCTTTGCGTATGCGTCAAGTTGGGGATCGCTCGGTAAGTGCTCGAT
GTTGTAGTGCGTGATCCAAGTAAGCTCCTAACCAGAATTCCTTTCAAGCA
TGGCTAGTCATCACCGAGGCATACTCATCGCGGCTGCGCACTTACCAAAG
CACGATTTCTATGTGTTTCTACTGGATCTCGCAGTGGATCTTCGGCTTTA
TCACGCCGTATATGGTGGACGAATCCGCTGGCAATCTTGGCGTGAATATG
ATGTATGTCTTAGCGGGGTTCACCGTCCTATCGCTCGCTTGGGCCTATTT
TTACCTGCCCGAGTTGAGCGGTCTTACGCAAGCTGAGGTGAATAGATTTC
TTTCCTCCCTGCGGACACGATGCTAAACAGAATTAGATGGACCGCATGTT
TGATGAGGGGATCGCGGCGTGGAAATCCAAGGCATGGAAGCGGGAGCAGA
AAATGGCAGTGGAAGCCATCAACCGGACCGGAAGTTTGCATGAGATAGTT
ACGGTAGTTGACAAGGGTAACTAG
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Coding sequence (CDS) from alignment at ch5:3238270..3239493+

>KJC3_007738-T1 ID=KJC3_007738-T1|Name=KJC3_007738-T1|organism=Aspergillus niger KJC3|type=CDS|length=4212bp|location=Sequence derived from alignment at ch5:3238270..3239493+ (Aspergillus niger KJC3)
ATGGGCCTAGTCACCGCATCGGGAGGGAACTACGGCCTTTCTTACCTGAG
CGGATCGAAGCAGTGGCGAATTGAGATCGCCATTCAATTCGCCCATGCAA
TCCTTCTTATGATCGCGGGCATCAGCAATCCCGAATCCCCACGCCATCTC
GCCAGGCTCGGCAACCACACTGCGGCACGCACCAGTCTTGGCCGGCTCCG
GGGGCTTGCGGCTGACTCCCCGGAACTCGACGAGGCGATAGCTGAAGTGC
ACATCTGGCTGCTCGAAGACGCGGAGCAGCAGCAGAAAGCCCGGTTCCGG
GAGTGTTTTGAGGGGCCCAACCTGCGTCGCCTCGTACTAGGCTGCTCCAT
GGGCTTCCATGCTGAATCGACTGGCATTGTGTTCTTCTTGTCGTACTCAA
CCACCTTCCTCGCTGGGGCAGGAATCACCAACGCCTACCTTATTACCTTT
ATCATCGGCCTCGTCATGTCGGCCTCTACCCTGCCATCCATATATTGCCT
TGACCATCTGGGTCGCCGCTCATGCGCCTTTATCGGAGGGACAATGATGC
TCATCGTCTGTATTGTCACAGGGGCAATCCACTCGGCCGTGCCGCTGTCG
GCTGCAAGTCAGCATGCGCTCATTGCGGGGTCGCTTCTCTTTATCTTTGC
GTATGCGTCAAGTTGGGGATCGCTCGCATGGCTAGTCATCACCGAGGCAT
ACTCATCGCGGCTGCGCACTTACCAAAGCACGATTTCTATGTGTTTCTAC
TGGATCTCGCAGTGGATCTTCGGCTTTATCACGCCGTATATGGTGGACGA
ATCCGCTGGCAATCTTGGCGTGAATATGATGTATGTCTTAGCGGGGTTCA
CCGTCCTATCGCTCGCTTGGGCCTATTTTTACCTGCCCGAGTTGAGCGGT
CTTACGCAAGCTGAGATGGACCGCATGTTTGATGAGGGGATCGCGGCGTG
GAAATCCAAGGCATGGAAGCGGGAGCAGAAAATGGCAGTGGAAGCCATCA
ACCGGACCGGAAGTTTGCATGAGATAGTTACGGTAGTTGACAAGGGTAAC
TAGATGGGCCTAGTCACCGCATCGGGAGGGAACTACGGCCTTTCTTACCT
GAGCGGATCGAAGCAGTGGCGAATTGAGATCGCCATTCAATTCGCCCATG
CAATCCTTCTTATGATCGCGGGCATCAGCAATCCCGAATCCCCACGCCAT
CTCGCCAGGCTCGGCAACCACACTGCGGCACGCACCAGTCTTGGCCGGCT
CCGGGGGCTTGCGGCTGACTCCCCGGAACTCGACGAGGCGATAGCTGAAG
TGCACATCTGGCTGCTCGAAGACGCGGAGCAGCAGCAGAAAGCCCGGTTC
CGGGAGTGTTTTGAGGGGCCCAACCTGCGTCGCCTCGTACTAGGCTGCTC
CATGGGCTTCCATGCTGAATCGACTGGCATTGTGTTCTTCTTGTCGTACT
CAACCACCTTCCTCGCTGGGGCAGGAATCACCAACGCCTACCTTATTACC
TTTATCATCGGCCTCGTCATGTCGGCCTCTACCCTGCCATCCATATATTG
CCTTGACCATCTGGGTCGCCGCTCATGCGCCTTTATCGGAGGGACAATGA
TGCTCATCGTCTGTATTGTCACAGGGGCAATCCACTCGGCCGTGCCGCTG
TCGGCTGCAAGTCAGCATGCGCTCATTGCGGGGTCGCTTCTCTTTATCTT
TGCGTATGCGTCAAGTTGGGGATCGCTCGCATGGCTAGTCATCACCGAGG
CATACTCATCGCGGCTGCGCACTTACCAAAGCACGATTTCTATGTGTTTC
TACTGGATCTCGCAGTGGATCTTCGGCTTTATCACGCCGTATATGGTGGA
CGAATCCGCTGGCAATCTTGGCGTGAATATGATGTATGTCTTAGCGGGGT
TCACCGTCCTATCGCTCGCTTGGGCCTATTTTTACCTGCCCGAGTTGAGC
GGTCTTACGCAAGCTGAGATGGACCGCATGTTTGATGAGGGGATCGCGGC
GTGGAAATCCAAGGCATGGAAGCGGGAGCAGAAAATGGCAGTGGAAGCCA
TCAACCGGACCGGAAGTTTGCATGAGATAGTTACGGTAGTTGACAAGGGT
AACTAGATGGGCCTAGTCACCGCATCGGGAGGGAACTACGGCCTTTCTTA
CCTGAGCGGATCGAAGCAGTGGCGAATTGAGATCGCCATTCAATTCGCCC
ATGCAATCCTTCTTATGATCGCGGGCATCAGCAATCCCGAATCCCCACGC
CATCTCGCCAGGCTCGGCAACCACACTGCGGCACGCACCAGTCTTGGCCG
GCTCCGGGGGCTTGCGGCTGACTCCCCGGAACTCGACGAGGCGATAGCTG
AAGTGCACATCTGGCTGCTCGAAGACGCGGAGCAGCAGCAGAAAGCCCGG
TTCCGGGAGTGTTTTGAGGGGCCCAACCTGCGTCGCCTCGTACTAGGCTG
CTCCATGGGCTTCCATGCTGAATCGACTGGCATTGTGTTCTTCTTGTCGT
ACTCAACCACCTTCCTCGCTGGGGCAGGAATCACCAACGCCTACCTTATT
ACCTTTATCATCGGCCTCGTCATGTCGGCCTCTACCCTGCCATCCATATA
TTGCCTTGACCATCTGGGTCGCCGCTCATGCGCCTTTATCGGAGGGACAA
TGATGCTCATCGTCTGTATTGTCACAGGGGCAATCCACTCGGCCGTGCCG
CTGTCGGCTGCAAGTCAGCATGCGCTCATTGCGGGGTCGCTTCTCTTTAT
CTTTGCGTATGCGTCAAGTTGGGGATCGCTCGCATGGCTAGTCATCACCG
AGGCATACTCATCGCGGCTGCGCACTTACCAAAGCACGATTTCTATGTGT
TTCTACTGGATCTCGCAGTGGATCTTCGGCTTTATCACGCCGTATATGGT
GGACGAATCCGCTGGCAATCTTGGCGTGAATATGATGTATGTCTTAGCGG
GGTTCACCGTCCTATCGCTCGCTTGGGCCTATTTTTACCTGCCCGAGTTG
AGCGGTCTTACGCAAGCTGAGATGGACCGCATGTTTGATGAGGGGATCGC
GGCGTGGAAATCCAAGGCATGGAAGCGGGAGCAGAAAATGGCAGTGGAAG
CCATCAACCGGACCGGAAGTTTGCATGAGATAGTTACGGTAGTTGACAAG
GGTAACTAGATGGGCCTAGTCACCGCATCGGGAGGGAACTACGGCCTTTC
TTACCTGAGCGGATCGAAGCAGTGGCGAATTGAGATCGCCATTCAATTCG
CCCATGCAATCCTTCTTATGATCGCGGGCATCAGCAATCCCGAATCCCCA
CGCCATCTCGCCAGGCTCGGCAACCACACTGCGGCACGCACCAGTCTTGG
CCGGCTCCGGGGGCTTGCGGCTGACTCCCCGGAACTCGACGAGGCGATAG
CTGAAGTGCACATCTGGCTGCTCGAAGACGCGGAGCAGCAGCAGAAAGCC
CGGTTCCGGGAGTGTTTTGAGGGGCCCAACCTGCGTCGCCTCGTACTAGG
CTGCTCCATGGGCTTCCATGCTGAATCGACTGGCATTGTGTTCTTCTTGT
CGTACTCAACCACCTTCCTCGCTGGGGCAGGAATCACCAACGCCTACCTT
ATTACCTTTATCATCGGCCTCGTCATGTCGGCCTCTACCCTGCCATCCAT
ATATTGCCTTGACCATCTGGGTCGCCGCTCATGCGCCTTTATCGGAGGGA
CAATGATGCTCATCGTCTGTATTGTCACAGGGGCAATCCACTCGGCCGTG
CCGCTGTCGGCTGCAAGTCAGCATGCGCTCATTGCGGGGTCGCTTCTCTT
TATCTTTGCGTATGCGTCAAGTTGGGGATCGCTCGCATGGCTAGTCATCA
CCGAGGCATACTCATCGCGGCTGCGCACTTACCAAAGCACGATTTCTATG
TGTTTCTACTGGATCTCGCAGTGGATCTTCGGCTTTATCACGCCGTATAT
GGTGGACGAATCCGCTGGCAATCTTGGCGTGAATATGATGTATGTCTTAG
CGGGGTTCACCGTCCTATCGCTCGCTTGGGCCTATTTTTACCTGCCCGAG
TTGAGCGGTCTTACGCAAGCTGAGATGGACCGCATGTTTGATGAGGGGAT
CGCGGCGTGGAAATCCAAGGCATGGAAGCGGGAGCAGAAAATGGCAGTGG
AAGCCATCAACCGGACCGGAAGTTTGCATGAGATAGTTACGGTAGTTGAC
AAGGGTAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007738KJC3_007738Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007738-T1.exon1KJC3_007738-T1.exon1Aspergillus niger KJC3exon
KJC3_007738-T1.exon2KJC3_007738-T1.exon2Aspergillus niger KJC3exon
KJC3_007738-T1.exon3KJC3_007738-T1.exon3Aspergillus niger KJC3exon
KJC3_007738-T1.exon4KJC3_007738-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007738-T1.cdsKJC3_007738-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007738-T1KJC3_007738-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefPFAM:PF00083
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3238270..3239493 +
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