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KJC3_007741-T1, KJC3_007741-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007741-T1
Unique NameKJC3_007741-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3245327..3246363+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007741-T1 ID=KJC3_007741-T1|Name=KJC3_007741-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1037bp|location=Sequence derived from alignment at ch5:3245327..3246363+ (Aspergillus niger KJC3)
ATGGCGAACAATATTTCTCCCGCATCATCCGACCCACACCAGGCACTGTG
GGCTACCCCAGCGACCGGAAGAAGGAGATATACTTCCAAAGCATGCGAAG
AATGTCGTCGTCGTCGAGCGAAGGTGTTACTTCCAAGTCCGAAAATGATT
GCTTGGCCCTTCCCTCGGTAGATTGCTTACAACTATCTTTTTTACACAAG
ATGTAGTGCGATGGTTCTCGACCAGTTTGTGGCCGCTGCTTCGGGCGCCA
TCTTTCCTGTCAGTATTCGGCCAAAGAGGATGGCCGTCAACCGGCCCCAA
AATCCTATGTCGTCCTCCTGCGAGACCGCATCGAGATGCTGGAAGCGGTG
CTGCGCATGCATGGCATCACCCCCACCCCGACGACTGGCACCGGAGGTTC
TTCGGATGCGGAGGGGCTGTGTGAAGCCCTACGGGGCACGCTGACGCTCG
ATCAAACCATGAACTTCGACCAGGACGGGGAGCTCCGATACTTTGGGCCT
TCCAGCGGCCGCCAGCCGATCCAGCAATATGCGGGGGGTGGCGATCTCTC
TTCGTCCGAGCCCAGCGGGCAGTCCGACGGGAGCGGCCAGCTTCGGTCGC
GTCGAGGGGTCAATCGACTCTACCAGTCGATGACCGAGGACGATCAAATC
GACCCGACACTGGTGAGCGAGCTTGTCAGCCTTTACTTCACTTGGGAGTG
TCCATGGGCGCCGGTGGTGGATGAGGCGCTCTTCCGCCGAAGCTGGCAGG
CGAAAGACGATGATCGCTACTTTAGCCCGTTACTCCTCAACGCCATCCTC
GCCTGTGGGTCGCGCCATAACGACCGAGTGGAGATCCGCTCCGATCCAGA
CGATCCTAATACGGCCGGCCGCCTTTTCTTGGAAAAGGCCGAGGTGCTCC
TCTACTATGATCTCAAATGCCCCAACATTACCACCTTGCAGAGTCTGGTC
ATTATGGCAACCACTTACATTGTGAGTTTGGTCAAGGGTCACTGGCGCCT
TTTTAGGGTGGACGGGGGGAAGTTTGTTCCAGGCTAA
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Coding sequence (CDS) from alignment at ch5:3245327..3246363+

>KJC3_007741-T1 ID=KJC3_007741-T1|Name=KJC3_007741-T1|organism=Aspergillus niger KJC3|type=CDS|length=1908bp|location=Sequence derived from alignment at ch5:3245327..3246363+ (Aspergillus niger KJC3)
ATGGCGAACAATATTTCTCCCGCATCATCCGACCCACACCAGGCACTGTG
GGCTACCCCAGCGACCGGAAGAAGGAGATATACTTCCAAAGCATGCGAAG
AATGTCGTCGTCGTCGAGCGAAGTGCGATGGTTCTCGACCAGTTTGTGGC
CGCTGCTTCGGGCGCCATCTTTCCTGTCAGTATTCGGCCAAAGAGGATGG
CCGTCAACCGGCCCCAAAATCCTATGTCGTCCTCCTGCGAGACCGCATCG
AGATGCTGGAAGCGGTGCTGCGCATGCATGGCATCACCCCCACCCCGACG
ACTGGCACCGGAGGTTCTTCGGATGCGGAGGGGCTGTGTGAAGCCCTACG
GGGCACGCTGACGCTCGATCAAACCATGAACTTCGACCAGGACGGGGAGC
TCCGATACTTTGGGCCTTCCAGCGGCCGCCAGCCGATCCAGCAATATGCG
GGGGGTGGCGATCTCTCTTCGTCCGAGCCCAGCGGGCAGTCCGACGGGAG
CGGCCAGCTTCGGTCGCGTCGAGGGGTCAATCGACTCTACCAGTCGATGA
CCGAGGACGATCAAATCGACCCGACACTGGTGAGCGAGCTTGTCAGCCTT
TACTTCACTTGGGAGTGTCCATGGGCGCCGGTGGTGGATGAGGCGCTCTT
CCGCCGAAGCTGGCAGGCGAAAGACGATGATCGCTACTTTAGCCCGTTAC
TCCTCAACGCCATCCTCGCCTGTGGGTCGCGCCATAACGACCGAGTGGAG
ATCCGCTCCGATCCAGACGATCCTAATACGGCCGGCCGCCTTTTCTTGGA
AAAGGCCGAGGTGCTCCTCTACTATGATCTCAAATGCCCCAACATTACCA
CCTTGCAGAGTCTGGTCATTATGGCAACCACTTACATTGTGAGTTTGGTC
AAGGGTCACTGGCGCCTTTTTAGGGTGGACGGGGGGAAGTTTGTTCCAGG
CTAAATGGCGAACAATATTTCTCCCGCATCATCCGACCCACACCAGGCAC
TGTGGGCTACCCCAGCGACCGGAAGAAGGAGATATACTTCCAAAGCATGC
GAAGAATGTCGTCGTCGTCGAGCGAAGTGCGATGGTTCTCGACCAGTTTG
TGGCCGCTGCTTCGGGCGCCATCTTTCCTGTCAGTATTCGGCCAAAGAGG
ATGGCCGTCAACCGGCCCCAAAATCCTATGTCGTCCTCCTGCGAGACCGC
ATCGAGATGCTGGAAGCGGTGCTGCGCATGCATGGCATCACCCCCACCCC
GACGACTGGCACCGGAGGTTCTTCGGATGCGGAGGGGCTGTGTGAAGCCC
TACGGGGCACGCTGACGCTCGATCAAACCATGAACTTCGACCAGGACGGG
GAGCTCCGATACTTTGGGCCTTCCAGCGGCCGCCAGCCGATCCAGCAATA
TGCGGGGGGTGGCGATCTCTCTTCGTCCGAGCCCAGCGGGCAGTCCGACG
GGAGCGGCCAGCTTCGGTCGCGTCGAGGGGTCAATCGACTCTACCAGTCG
ATGACCGAGGACGATCAAATCGACCCGACACTGGTGAGCGAGCTTGTCAG
CCTTTACTTCACTTGGGAGTGTCCATGGGCGCCGGTGGTGGATGAGGCGC
TCTTCCGCCGAAGCTGGCAGGCGAAAGACGATGATCGCTACTTTAGCCCG
TTACTCCTCAACGCCATCCTCGCCTGTGGGTCGCGCCATAACGACCGAGT
GGAGATCCGCTCCGATCCAGACGATCCTAATACGGCCGGCCGCCTTTTCT
TGGAAAAGGCCGAGGTGCTCCTCTACTATGATCTCAAATGCCCCAACATT
ACCACCTTGCAGAGTCTGGTCATTATGGCAACCACTTACATTGTGAGTTT
GGTCAAGGGTCACTGGCGCCTTTTTAGGGTGGACGGGGGGAAGTTTGTTC
CAGGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007741KJC3_007741Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007741-T1.exon1KJC3_007741-T1.exon1Aspergillus niger KJC3exon
KJC3_007741-T1.exon2KJC3_007741-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007741-T1.cdsKJC3_007741-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007741-T1KJC3_007741-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3245327..3246363 +
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