|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:61540..62542- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007757-T1 ID=KJC3_007757-T1|Name=KJC3_007757-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1003bp|location=Sequence derived from alignment at ch6:61540..62542- (Aspergillus niger KJC3)
ATGGTTCCACTAACGCCTAAATTCGGTGTATACACACCATTAGTGACCTT
CTTTACGGAGGACGAATCTCTCGATATTGAAAGTACCTTGACACATGCTA
AGCGCATGGCTGAAGGCGATGTTGCTGGGCTAGTCCTTCAAGGAAGTAAC
GGAGAAGCACCACATCTGGATCACGAAGAACGCAAATACTTGGTGCGCGC
GGTGCGCGACCATCTCAATGAGTTGGGGTATGTGCAGATACAGCTGATTG
TTGGATGCGGCGCACCAAGTGTCCGAGAAACATTGGCGCATATTACTGAA
GCAAAAGAATCTGGCGCCGACTTTGCACTGGTGTTGCCCCCGGCATATTG
GGTCTTAGCTATGAGCACTGACGTAATTGAAGGGTTCTTCGACGATGTAT
TTTCCCTAGTTTCCAGTCATTTCAGATTACTTATCTAGATTACCTTACCT
GACTGGATCACAGGTAGCATCTAGCTCTCCACTTCCAGTTCTGATCTACA
ACTTCCCTGGAGTGACTGGTGGTATCGACATAAGTTCAGACTCAACCATC
CGGCTCGCCCAATCCAACTCCAATATTGTTGGGTGCAAGCTCACTTGCGG
AAATGTTGGAAAGCTTCAGCGTATATCATCTACACTTCCTACCACTTCCT
TTGCCGCATTTGGAGGAAAGTCGGACTTTTTTTTGCCCGCCCTCGTAGCC
GGGTCCAATGGAATCATCGCAGCTCTTGCCAACATCGCGCCAAAAGTGCA
TGTGGAATTGCTGAGAAGATATGAGAATGGTGATATCAAGGGTGCTCAAG
AGCTTCAATCCCTGCTCAGTCATGCAGACGGTGCTCTTGTCAAAGTGGGC
GTGACTGGTGTCAAAGCTATTGTGGCACATTGTTTCAAATATGGTTCAGG
GCAAGGGCGTAAGCCCCTGCGAAACTCTACTATCGCGACACTGAGCCCGA
ACATTCTGGAGCCCATTCTAAGAGTGGTTGAGCGGGAAAGAATGTGTAAT
TAG back to topCoding sequence (CDS) from alignment at ch6:61540..62542- >KJC3_007757-T1 ID=KJC3_007757-T1|Name=KJC3_007757-T1|organism=Aspergillus niger KJC3|type=CDS|length=1872bp|location=Sequence derived from alignment at ch6:61540..62542- (Aspergillus niger KJC3)
GTAGCATCTAGCTCTCCACTTCCAGTTCTGATCTACAACTTCCCTGGAGT
GACTGGTGGTATCGACATAAGTTCAGACTCAACCATCCGGCTCGCCCAAT
CCAACTCCAATATTGTTGGGTGCAAGCTCACTTGCGGAAATGTTGGAAAG
CTTCAGCGTATATCATCTACACTTCCTACCACTTCCTTTGCCGCATTTGG
AGGAAAGTCGGACTTTTTTTTGCCCGCCCTCGTAGCCGGGTCCAATGGAA
TCATCGCAGCTCTTGCCAACATCGCGCCAAAAGTGCATGTGGAATTGCTG
AGAAGATATGAGAATGGTGATATCAAGGGTGCTCAAGAGCTTCAATCCCT
GCTCAGTCATGCAGACGGTGCTCTTGTCAAAGTGGGCGTGACTGGTGTCA
AAGCTATTGTGGCACATTGTTTCAAATATGGTTCAGGGCAAGGGCGTAAG
CCCCTGCGAAACTCTACTATCGCGACACTGAGCCCGAACATTCTGGAGCC
CATTCTAAGAGTGGTTGAGCGGGAAAGAATGTGTAATTAGATGGTTCCAC
TAACGCCTAAATTCGGTGTATACACACCATTAGTGACCTTCTTTACGGAG
GACGAATCTCTCGATATTGAAAGTACCTTGACACATGCTAAGCGCATGGC
TGAAGGCGATGTTGCTGGGCTAGTCCTTCAAGGAAGTAACGGAGAAGCAC
CACATCTGGATCACGAAGAACGCAAATACTTGGTGCGCGCGGTGCGCGAC
CATCTCAATGAGTTGGGGTATGTGCAGATACAGCTGATTGTTGGATGCGG
CGCACCAAGTGTCCGAGAAACATTGGCGCATATTACTGAAGCAAAAGAAT
CTGGCGCCGACTTTGCACTGGTGTTGCCCCCGGCATATTGGGTCTTAGCT
ATGAGCACTGACGTAATTGAAGGGTTCTTCGACGATGTAGCATCTAGCTC
TCCACTTCCAGTTCTGATCTACAACTTCCCTGGAGTGACTGGTGGTATCG
ACATAAGTTCAGACTCAACCATCCGGCTCGCCCAATCCAACTCCAATATT
GTTGGGTGCAAGCTCACTTGCGGAAATGTTGGAAAGCTTCAGCGTATATC
ATCTACACTTCCTACCACTTCCTTTGCCGCATTTGGAGGAAAGTCGGACT
TTTTTTTGCCCGCCCTCGTAGCCGGGTCCAATGGAATCATCGCAGCTCTT
GCCAACATCGCGCCAAAAGTGCATGTGGAATTGCTGAGAAGATATGAGAA
TGGTGATATCAAGGGTGCTCAAGAGCTTCAATCCCTGCTCAGTCATGCAG
ACGGTGCTCTTGTCAAAGTGGGCGTGACTGGTGTCAAAGCTATTGTGGCA
CATTGTTTCAAATATGGTTCAGGGCAAGGGCGTAAGCCCCTGCGAAACTC
TACTATCGCGACACTGAGCCCGAACATTCTGGAGCCCATTCTAAGAGTGG
TTGAGCGGGAAAGAATGTGTAATTAGATGGTTCCACTAACGCCTAAATTC
GGTGTATACACACCATTAGTGACCTTCTTTACGGAGGACGAATCTCTCGA
TATTGAAAGTACCTTGACACATGCTAAGCGCATGGCTGAAGGCGATGTTG
CTGGGCTAGTCCTTCAAGGAAGTAACGGAGAAGCACCACATCTGGATCAC
GAAGAACGCAAATACTTGGTGCGCGCGGTGCGCGACCATCTCAATGAGTT
GGGGTATGTGCAGATACAGCTGATTGTTGGATGCGGCGCACCAAGTGTCC
GAGAAACATTGGCGCATATTACTGAAGCAAAAGAATCTGGCGCCGACTTT
GCACTGGTGTTGCCCCCGGCATATTGGGTCTTAGCTATGAGCACTGACGT
AATTGAAGGGTTCTTCGACGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.1 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR002220 |
| DBxref | PFAM:PF00701 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:61540..62542 - |
|
