You are here

Home

KJC3_007759-T1, KJC3_007759-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007759-T1
Unique NameKJC3_007759-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:65325..66935+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007759-T1 ID=KJC3_007759-T1|Name=KJC3_007759-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1611bp|location=Sequence derived from alignment at ch6:65325..66935+ (Aspergillus niger KJC3)
ATGACTACCCAACCCAACGAAAAAGGCGTTTTAAAGGTTCCACCCAACCA
TGATATGGAGCAAGCGGATACTGAGCGTGGCGAGATCAAGCATGGAGAGA
CGCGAGACTTCGACCCAGCCCTGCAGTTTATGGCTGATGGCGAAATCGAA
TATACCCCTGAAGAGTCCCGCAAAGTGTTGTTCAAGATCGACCGAGTCCT
GATGCCTTTGCTGTGTTGGGTTTATTTGATCCAATTTGCCGACAAAACGT
CTTTAAATTATGCCTCCCTAATGGGAATCCGCGAGGACACACACTTGGAC
CCTGAGTCACAGCAATACAGCTGGGTCTCGAGCATTTTCTACGCTGGATA
CATATTCTGGGAGTATGTACCATTGCATTCTCTCTACCTCCCTTCTCTAG
GTCCATGCTAATCTTGGTATAGATTTCCCACTACCTATCTGCTACGTCGA
CTTCCACTAGGGAAATATACTTCAGCCAATATTCTGATTTGGGGCGTCGT
GCTTCTCTGCCATGTCGCAGCTGATAGTTACGCTGGACTGCTCTGTGTTC
GCTTTTTCCTCGGCGCGTTCGAAGCGACAATAACTCCGGCCTTCGTCCTG
TTTACCTCCTGTTGGTATAAACAAGAGGATCAGGCCAAGCGTATGGGCTT
CTGGCTTGCTTGCAACGGTGTCGCTCAGATACTGATTGCGGCAATCGCGT
ATGGACTGTCAGGTGTGCAGGAGGCATCTATTCCTGTGTGGAAGATACTC
TTCCTGGTGCTTGGCTTGCCTACCGTTCTCACCGGCTTTCTTTATTTTTG
GTTCATGCCTAACAATCAAATCCAGGCCAAATTCCTGAGCCACCGCGAGA
AGCATATTGCTGTTGATCGCATCAGAGGCAATTTTCAAGGCATTGGGAAC
CGTACTTGGAAATGGGCACATTTCTTCGAAGCATTCCGGGATCCACGCAC
ATACCTCTACGTTCTATTTTCATTCTTGATGAATATTCCAAATGGAGGAA
TCACTACCTTTGGTTCTCTCATTATCAGCTCTTTCGGCTTCTCTAGCCGG
ATGTCCCTCATGCTTAACATGCCAATGGGTCTTGTTTATATCTCCTGCAA
GCTGGGGTTGACGTACATGTCGGACAGATTACTTGACCGAACCCTCTTTG
CCATCATCGCTATCCTTATACCTATGGTTGGCGGCATCTTGATGATTGTC
CTTCCCTTTCACGCAAAAGCCGGCTTGTTGGTGGGTTACTATTGTATCGG
TGCTGCCGGGACCTCGTGGTGTTTGGTCATGGTGATGATATCTAACAATA
CGCTGGGTTACACCAAGAAGGCAACTGTGAATGGTCTTCAGATATTGGCC
TATGCTGCTGGAAACTGGATCGGACCGCAGACGTTCCGCTCGAATCAAGC
GCCGGAGTACTTCGACGGCAAGTTGCTCGTTGCCATCATGTACGCTCTGG
CAGCGGCTACCTTATTGGTAATTCGTCTGGTGAACATTATGGAAAATAAG
AAACGCGACCGGCAGGCAAGTTCTGATCCTGACCGCGAGAACGTTATTGT
TGGGACTGAGTTCCTCGATTTGACGGATTTCGAGCAGCCAGCCTTCCGCT
ATGTGCTCTGA
back to top

Coding sequence (CDS) from alignment at ch6:65325..66935+

>KJC3_007759-T1 ID=KJC3_007759-T1|Name=KJC3_007759-T1|organism=Aspergillus niger KJC3|type=CDS|length=3102bp|location=Sequence derived from alignment at ch6:65325..66935+ (Aspergillus niger KJC3)
ATGACTACCCAACCCAACGAAAAAGGCGTTTTAAAGGTTCCACCCAACCA
TGATATGGAGCAAGCGGATACTGAGCGTGGCGAGATCAAGCATGGAGAGA
CGCGAGACTTCGACCCAGCCCTGCAGTTTATGGCTGATGGCGAAATCGAA
TATACCCCTGAAGAGTCCCGCAAAGTGTTGTTCAAGATCGACCGAGTCCT
GATGCCTTTGCTGTGTTGGGTTTATTTGATCCAATTTGCCGACAAAACGT
CTTTAAATTATGCCTCCCTAATGGGAATCCGCGAGGACACACACTTGGAC
CCTGAGTCACAGCAATACAGCTGGGTCTCGAGCATTTTCTACGCTGGATA
CATATTCTGGGAATTTCCCACTACCTATCTGCTACGTCGACTTCCACTAG
GGAAATATACTTCAGCCAATATTCTGATTTGGGGCGTCGTGCTTCTCTGC
CATGTCGCAGCTGATAGTTACGCTGGACTGCTCTGTGTTCGCTTTTTCCT
CGGCGCGTTCGAAGCGACAATAACTCCGGCCTTCGTCCTGTTTACCTCCT
GTTGGTATAAACAAGAGGATCAGGCCAAGCGTATGGGCTTCTGGCTTGCT
TGCAACGGTGTCGCTCAGATACTGATTGCGGCAATCGCGTATGGACTGTC
AGGTGTGCAGGAGGCATCTATTCCTGTGTGGAAGATACTCTTCCTGGTGC
TTGGCTTGCCTACCGTTCTCACCGGCTTTCTTTATTTTTGGTTCATGCCT
AACAATCAAATCCAGGCCAAATTCCTGAGCCACCGCGAGAAGCATATTGC
TGTTGATCGCATCAGAGGCAATTTTCAAGGCATTGGGAACCGTACTTGGA
AATGGGCACATTTCTTCGAAGCATTCCGGGATCCACGCACATACCTCTAC
GTTCTATTTTCATTCTTGATGAATATTCCAAATGGAGGAATCACTACCTT
TGGTTCTCTCATTATCAGCTCTTTCGGCTTCTCTAGCCGGATGTCCCTCA
TGCTTAACATGCCAATGGGTCTTGTTTATATCTCCTGCAAGCTGGGGTTG
ACGTACATGTCGGACAGATTACTTGACCGAACCCTCTTTGCCATCATCGC
TATCCTTATACCTATGGTTGGCGGCATCTTGATGATTGTCCTTCCCTTTC
ACGCAAAAGCCGGCTTGTTGGTGGGTTACTATTGTATCGGTGCTGCCGGG
ACCTCGTGGTGTTTGGTCATGGTGATGATATCTAACAATACGCTGGGTTA
CACCAAGAAGGCAACTGTGAATGGTCTTCAGATATTGGCCTATGCTGCTG
GAAACTGGATCGGACCGCAGACGTTCCGCTCGAATCAAGCGCCGGAGTAC
TTCGACGGCAAGTTGCTCGTTGCCATCATGTACGCTCTGGCAGCGGCTAC
CTTATTGGTAATTCGTCTGGTGAACATTATGGAAAATAAGAAACGCGACC
GGCAGGCAAGTTCTGATCCTGACCGCGAGAACGTTATTGTTGGGACTGAG
TTCCTCGATTTGACGGATTTCGAGCAGCCAGCCTTCCGCTATGTGCTCTG
AATGACTACCCAACCCAACGAAAAAGGCGTTTTAAAGGTTCCACCCAACC
ATGATATGGAGCAAGCGGATACTGAGCGTGGCGAGATCAAGCATGGAGAG
ACGCGAGACTTCGACCCAGCCCTGCAGTTTATGGCTGATGGCGAAATCGA
ATATACCCCTGAAGAGTCCCGCAAAGTGTTGTTCAAGATCGACCGAGTCC
TGATGCCTTTGCTGTGTTGGGTTTATTTGATCCAATTTGCCGACAAAACG
TCTTTAAATTATGCCTCCCTAATGGGAATCCGCGAGGACACACACTTGGA
CCCTGAGTCACAGCAATACAGCTGGGTCTCGAGCATTTTCTACGCTGGAT
ACATATTCTGGGAATTTCCCACTACCTATCTGCTACGTCGACTTCCACTA
GGGAAATATACTTCAGCCAATATTCTGATTTGGGGCGTCGTGCTTCTCTG
CCATGTCGCAGCTGATAGTTACGCTGGACTGCTCTGTGTTCGCTTTTTCC
TCGGCGCGTTCGAAGCGACAATAACTCCGGCCTTCGTCCTGTTTACCTCC
TGTTGGTATAAACAAGAGGATCAGGCCAAGCGTATGGGCTTCTGGCTTGC
TTGCAACGGTGTCGCTCAGATACTGATTGCGGCAATCGCGTATGGACTGT
CAGGTGTGCAGGAGGCATCTATTCCTGTGTGGAAGATACTCTTCCTGGTG
CTTGGCTTGCCTACCGTTCTCACCGGCTTTCTTTATTTTTGGTTCATGCC
TAACAATCAAATCCAGGCCAAATTCCTGAGCCACCGCGAGAAGCATATTG
CTGTTGATCGCATCAGAGGCAATTTTCAAGGCATTGGGAACCGTACTTGG
AAATGGGCACATTTCTTCGAAGCATTCCGGGATCCACGCACATACCTCTA
CGTTCTATTTTCATTCTTGATGAATATTCCAAATGGAGGAATCACTACCT
TTGGTTCTCTCATTATCAGCTCTTTCGGCTTCTCTAGCCGGATGTCCCTC
ATGCTTAACATGCCAATGGGTCTTGTTTATATCTCCTGCAAGCTGGGGTT
GACGTACATGTCGGACAGATTACTTGACCGAACCCTCTTTGCCATCATCG
CTATCCTTATACCTATGGTTGGCGGCATCTTGATGATTGTCCTTCCCTTT
CACGCAAAAGCCGGCTTGTTGGTGGGTTACTATTGTATCGGTGCTGCCGG
GACCTCGTGGTGTTTGGTCATGGTGATGATATCTAACAATACGCTGGGTT
ACACCAAGAAGGCAACTGTGAATGGTCTTCAGATATTGGCCTATGCTGCT
GGAAACTGGATCGGACCGCAGACGTTCCGCTCGAATCAAGCGCCGGAGTA
CTTCGACGGCAAGTTGCTCGTTGCCATCATGTACGCTCTGGCAGCGGCTA
CCTTATTGGTAATTCGTCTGGTGAACATTATGGAAAATAAGAAACGCGAC
CGGCAGGCAAGTTCTGATCCTGACCGCGAGAACGTTATTGTTGGGACTGA
GTTCCTCGATTTGACGGATTTCGAGCAGCCAGCCTTCCGCTATGTGCTCT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007759KJC3_007759Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007759-T1.exon1KJC3_007759-T1.exon1Aspergillus niger KJC3exon
KJC3_007759-T1.exon2KJC3_007759-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007759-T1.cdsKJC3_007759-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007759-T1KJC3_007759-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_6.1
NoteSMCOG1106:major facilitator transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:65325..66935 +
Powered by Drupal