You are here

Home

KJC3_007763-T1, KJC3_007763-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007763-T1
Unique NameKJC3_007763-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:80023..81817-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007763-T1 ID=KJC3_007763-T1|Name=KJC3_007763-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1795bp|location=Sequence derived from alignment at ch6:80023..81817- (Aspergillus niger KJC3)
CCCACCAACGTGATTAATTTCAGGCATTTTGGCCCCCCTTCTTGTGCATA
AGTATTAAACATACACAGAATTAAATGAGAAAGGATTCTTGCAAGATCAC
AGCCGGCATTTACTGGCTAGCGTAACTTTTAGAGTTCAGGTTCCCCCAGC
CCGCCAGGCAACCTGCCTCAAACCGAAGTCCTCGCCGACGTATTGATATT
GCGGCACCATAGACTTTCATGAGGTCTTGGATTTTGTGCTCCTCGTTCTG
AAGGGGACAACACTCCGCTTTTGTGGTATACACCTCGATAAAGACCAAAA
TGGGATCCACTTCGTCTCCAGGATATGATTCCAGTGCAACTCGTGTGCCT
ATCATTATTGGAGTTTGTGTACCTATGGTTGTTCTGGCCATTCTAGCAAC
CGCTCTTCGCATCTGGGCACGGGTCATGACCAACGTCAAATTGTGGTGGG
ATGATTGGTTATGCATCGTGGGACTCGTACGCCTGCCTCCCCCCTCAACC
CTAATAAAACATCTTACTCGTTCCACGAGAAGCTAATAGAAAGGCTTTTC
CCGCACAGCCATTTGCAATCCTGCCTTCCATCTTCGACTTCGTTCAAATC
AATAATGGCTTCGGACGACCGATGGCAACAGTGCCAGCTGATAAACTGGT
TACATACAGTCTATTCCTGTACATTCTGATGTTGTTCTATAACCTGGGAC
TAGCATTCTTCAAGCTGTCGTGCCTGGCACTGTATATTCGGATGTTTGGA
ATTCATCGTTGGATCCGCTACATGAGTTATGTCATCGGTCTGATGGTCAT
TGCCTGGGTCTTGGCCAATGAATTGGTCCTGGCTTTCCGATGCCATCCAA
TTGATCTGGCCTGGAAGGGAACTGCAGAACAGCAGGCAAAATTCTGCGTC
ACGCAGACGAACATATTCATCGCGCAGTCCGGTCCGACAATATTCTTCGA
TCTACTTATTCTCATCATGCCCATTCGAGTCGTCTGGGGTCTGCATTTGC
AATCGGCACAAAAGCTTGGTGCCATCCTTGTTTTTTCTTTGGGATTGCTG
GTTACCGTCATTAGTATGATCCGCCTCGCAGATACACTTCACTCGACAGA
CACAGACTTGACCTGTACGTTCTTTAGCTTCATGAGACTTAGATGCGCCA
GTGAAAGAATCTGACATTTGATGACAGACGGATACGTCGAATTAGGCATG
TGGTCTGCGGTCGAGCCCGTGACTGGCTTGATTTGCTGTTCCCTCATGAC
TTATGGCCCATTTATCAAGAAACTTCGCCAAGCTGGCAAAGGATACATTC
GAGGCAAATCCAGCCACCATAGACAGTCGCACTCTTCAAATTCTTTTGCC
ACTCAAAATAAACTCACAGGTCATCGATCCGCGGAGTATGATCAGTCTGA
CCTCGAATTGACCTTTTGCTCATTCAGCAATGAGGCCCCCGTCGTGGGTA
AGGCCGATACCTTTGGAAAAATACATGACGGTGCGATAAACATCACCCAC
GAGTTCCAAGTTCGACGAGACTAAGCTGTTCGCTTGGAAAGCCCCCAAGC
GCTGGAGGACGGCATATCTCCAGATACTCAATTTAATTATTATTATTACC
TTTCAAAGATTATTGAGCCGTTACTCAGTTCACCCTTTTACACCGACATC
CATGCTGGAAATGACGTTCCTCTATGTAAGCTTCCCTTATGTAAGCGTGC
CACTCCAAGCGTGGTAGATCAAGCACGTTGTTTTCACCTTCGAATTCCGG
AAAGCTCAGTTCCCATACGCATGTGTATCCACGGGAAGAATGAAC
back to top

Coding sequence (CDS) from alignment at ch6:80023..81817-

>KJC3_007763-T1 ID=KJC3_007763-T1|Name=KJC3_007763-T1|organism=Aspergillus niger KJC3|type=CDS|length=3240bp|location=Sequence derived from alignment at ch6:80023..81817- (Aspergillus niger KJC3)
ACGGATACGTCGAATTAGGCATGTGGTCTGCGGTCGAGCCCGTGACTGGC
TTGATTTGCTGTTCCCTCATGACTTATGGCCCATTTATCAAGAAACTTCG
CCAAGCTGGCAAAGGATACATTCGAGGCAAATCCAGCCACCATAGACAGT
CGCACTCTTCAAATTCTTTTGCCACTCAAAATAAACTCACAGGTCATCGA
TCCGCGGAGTATGATCAGTCTGACCTCGAATTGACCTTTTGCTCATTCAG
CAATGAGGCCCCCGTCGTGGGTAAGGCCGATACCTTTGGAAAAATACATG
ACGGTGCGATAAACATCACCCACGAGTTCCAAGTTCGACGAGACTAACCA
TTTGCAATCCTGCCTTCCATCTTCGACTTCGTTCAAATCAATAATGGCTT
CGGACGACCGATGGCAACAGTGCCAGCTGATAAACTGGTTACATACAGTC
TATTCCTGTACATTCTGATGTTGTTCTATAACCTGGGACTAGCATTCTTC
AAGCTGTCGTGCCTGGCACTGTATATTCGGATGTTTGGAATTCATCGTTG
GATCCGCTACATGAGTTATGTCATCGGTCTGATGGTCATTGCCTGGGTCT
TGGCCAATGAATTGGTCCTGGCTTTCCGATGCCATCCAATTGATCTGGCC
TGGAAGGGAACTGCAGAACAGCAGGCAAAATTCTGCGTCACGCAGACGAA
CATATTCATCGCGCAGTCCGGTCCGACAATATTCTTCGATCTACTTATTC
TCATCATGCCCATTCGAGTCGTCTGGGGTCTGCATTTGCAATCGGCACAA
AAGCTTGGTGCCATCCTTGTTTTTTCTTTGGGATTGCTGGTTACCGTCAT
TAGTATGATCCGCCTCGCAGATACACTTCACTCGACAGACACAGACTTGA
CCTATGGGATCCACTTCGTCTCCAGGATATGATTCCAGTGCAACTCGTGT
GCCTATCATTATTGGAGTTTGTGTACCTATGGTTGTTCTGGCCATTCTAG
CAACCGCTCTTCGCATCTGGGCACGGGTCATGACCAACGTCAAATTGTGG
TGGGATGATTGGTTATGCATCGTGGGACTCACGGATACGTCGAATTAGGC
ATGTGGTCTGCGGTCGAGCCCGTGACTGGCTTGATTTGCTGTTCCCTCAT
GACTTATGGCCCATTTATCAAGAAACTTCGCCAAGCTGGCAAAGGATACA
TTCGAGGCAAATCCAGCCACCATAGACAGTCGCACTCTTCAAATTCTTTT
GCCACTCAAAATAAACTCACAGGTCATCGATCCGCGGAGTATGATCAGTC
TGACCTCGAATTGACCTTTTGCTCATTCAGCAATGAGGCCCCCGTCGTGG
GTAAGGCCGATACCTTTGGAAAAATACATGACGGTGCGATAAACATCACC
CACGAGTTCCAAGTTCGACGAGACTAACCATTTGCAATCCTGCCTTCCAT
CTTCGACTTCGTTCAAATCAATAATGGCTTCGGACGACCGATGGCAACAG
TGCCAGCTGATAAACTGGTTACATACAGTCTATTCCTGTACATTCTGATG
TTGTTCTATAACCTGGGACTAGCATTCTTCAAGCTGTCGTGCCTGGCACT
GTATATTCGGATGTTTGGAATTCATCGTTGGATCCGCTACATGAGTTATG
TCATCGGTCTGATGGTCATTGCCTGGGTCTTGGCCAATGAATTGGTCCTG
GCTTTCCGATGCCATCCAATTGATCTGGCCTGGAAGGGAACTGCAGAACA
GCAGGCAAAATTCTGCGTCACGCAGACGAACATATTCATCGCGCAGTCCG
GTCCGACAATATTCTTCGATCTACTTATTCTCATCATGCCCATTCGAGTC
GTCTGGGGTCTGCATTTGCAATCGGCACAAAAGCTTGGTGCCATCCTTGT
TTTTTCTTTGGGATTGCTGGTTACCGTCATTAGTATGATCCGCCTCGCAG
ATACACTTCACTCGACAGACACAGACTTGACCTATGGGATCCACTTCGTC
TCCAGGATATGATTCCAGTGCAACTCGTGTGCCTATCATTATTGGAGTTT
GTGTACCTATGGTTGTTCTGGCCATTCTAGCAACCGCTCTTCGCATCTGG
GCACGGGTCATGACCAACGTCAAATTGTGGTGGGATGATTGGTTATGCAT
CGTGGGACTCACGGATACGTCGAATTAGGCATGTGGTCTGCGGTCGAGCC
CGTGACTGGCTTGATTTGCTGTTCCCTCATGACTTATGGCCCATTTATCA
AGAAACTTCGCCAAGCTGGCAAAGGATACATTCGAGGCAAATCCAGCCAC
CATAGACAGTCGCACTCTTCAAATTCTTTTGCCACTCAAAATAAACTCAC
AGGTCATCGATCCGCGGAGTATGATCAGTCTGACCTCGAATTGACCTTTT
GCTCATTCAGCAATGAGGCCCCCGTCGTGGGTAAGGCCGATACCTTTGGA
AAAATACATGACGGTGCGATAAACATCACCCACGAGTTCCAAGTTCGACG
AGACTAACCATTTGCAATCCTGCCTTCCATCTTCGACTTCGTTCAAATCA
ATAATGGCTTCGGACGACCGATGGCAACAGTGCCAGCTGATAAACTGGTT
ACATACAGTCTATTCCTGTACATTCTGATGTTGTTCTATAACCTGGGACT
AGCATTCTTCAAGCTGTCGTGCCTGGCACTGTATATTCGGATGTTTGGAA
TTCATCGTTGGATCCGCTACATGAGTTATGTCATCGGTCTGATGGTCATT
GCCTGGGTCTTGGCCAATGAATTGGTCCTGGCTTTCCGATGCCATCCAAT
TGATCTGGCCTGGAAGGGAACTGCAGAACAGCAGGCAAAATTCTGCGTCA
CGCAGACGAACATATTCATCGCGCAGTCCGGTCCGACAATATTCTTCGAT
CTACTTATTCTCATCATGCCCATTCGAGTCGTCTGGGGTCTGCATTTGCA
ATCGGCACAAAAGCTTGGTGCCATCCTTGTTTTTTCTTTGGGATTGCTGG
TTACCGTCATTAGTATGATCCGCCTCGCAGATACACTTCACTCGACAGAC
ACAGACTTGACCTATGGGATCCACTTCGTCTCCAGGATATGATTCCAGTG
CAACTCGTGTGCCTATCATTATTGGAGTTTGTGTACCTATGGTTGTTCTG
GCCATTCTAGCAACCGCTCTTCGCATCTGGGCACGGGTCATGACCAACGT
CAAATTGTGGTGGGATGATTGGTTATGCATCGTGGGACTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007763KJC3_007763Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007763-T1KJC3_007763-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007763-T1.cdsKJC3_007763-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007763-T1.utr3p1KJC3_007763-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007763-T1.exon3KJC3_007763-T1.exon3Aspergillus niger KJC3exon
KJC3_007763-T1.exon2KJC3_007763-T1.exon2Aspergillus niger KJC3exon
KJC3_007763-T1.exon1KJC3_007763-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007763-T1.utr5p1KJC3_007763-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:80023..81817 -
Powered by Drupal