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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:101256..102504+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007772-T1 ID=KJC3_007772-T1|Name=KJC3_007772-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1249bp|location=Sequence derived from alignment at ch6:101256..102504+ (Aspergillus niger KJC3)
GCCTCTTTTTCCCGTGAGTGCCATTGACCCAATAGTCTCTCCCCCAATGC
GTTCCTTGGTCAGACTCACACATAACCAAAGGGGATGATGTATCCTTGTT
ATCCGCAACTACTAACTACTGGACTCGAGATGATGTATAAATACCTCCAT
TCCAGACTCCGCCATTCTTAGGAGACGCCAACTCGACAGTGCGTACATTC
ATGTACTGGACATGAATTGAGTGATCGAGATCTAGCTTAGTAGTTCAACC
ACTAACTGTTGTAACTTGTAGCATCTCTAGTAGTGCTCCTATGAATTAGC
GTCGTTTTGAAGTCCAACCTCATGCCCTGACTCATCCATCATCGAATAGT
AAACTAGTACCTCGCGCTGACCCCCACGCCAGCAAGGACGTTGTCTTCTT
CAATACTAGTAGTCGTAGTAAATATATAATCCCCCAGGGTCACGGTTTGT
AGACTCGGGTCATCATCATCATCATCATCATCAACTTCTTTCACAATCCC
TACCTCGAATCAAGCAAACAAGCAACTTAATAGTACTAGTAGTACTATCG
TCCCCATGTTCCAAGTCCTCCCCGTTACAGAGGCTGACCTCCCCACTATG
GTCGACTTATGGTACGACGCCTTTGGCGATCCCATCAACCGGCGGCTGTA
TCCCGATACCCCCGGGGCGCGCTCCTGGCTAGAGGACTACCACCGCGCCA
GTCTTCAATCCCCTGATCAACATTTTCTTAAAATAGTCACGGATACCGCA
CCAACATCTCCCCTGGTAGCGTTTGTGAAATGGGACTTCAACACTACCAC
CCCAGGTCACCACTTTCCACCCCGCCATGTCGATTTCGACCAGGCCTTCT
GTGACACTTTTTTTGGGGGCTTGGACCAGGCGCGACGGACCATCATGGAC
GCGCGTCCGCACTACTGTATGTTCCTGTTCCTATAGTCCTCAATTCTTAT
ATCTTTTTTTTCCTACCATTGCAGTACCTCCGCGATGGACCCGCTAATGG
TGACCCGTTACAGATCTGGACGCCTTGATCACCCACCCGGATTATCGCCG
GCAGGGAGCGGCATCAATGCTCATCCAGTGGGGATGTGACCGTGCCGATC
AGGACGGGATCCCCATATGGGTTGATTCCAGTCAGGAGGGGGCCCAGATC
TACCAGCGCTTCGGGTTTCGTGATGTCAGTGTGTTGGGAGTGACTCCGAC
CGGGGCTATGTCCATGCGGCGGGATCCCGTTCATGGCGAGGCCGTGTAA back to topCoding sequence (CDS) from alignment at ch6:101256..102504+ >KJC3_007772-T1 ID=KJC3_007772-T1|Name=KJC3_007772-T1|organism=Aspergillus niger KJC3|type=CDS|length=1194bp|location=Sequence derived from alignment at ch6:101256..102504+ (Aspergillus niger KJC3)
ATGTTCCAAGTCCTCCCCGTTACAGAGGCTGACCTCCCCACTATGGTCGA
CTTATGGTACGACGCCTTTGGCGATCCCATCAACCGGCGGCTGTATCCCG
ATACCCCCGGGGCGCGCTCCTGGCTAGAGGACTACCACCGCGCCAGTCTT
CAATCCCCTGATCAACATTTTCTTAAAATAGTCACGGATACCGCACCAAC
ATCTCCCCTGGTAGCGTTTGTGAAATGGGACTTCAACACTACCACCCCAG
GTCACCACTTTCCACCCCGCCATGTCGATTTCGACCAGGCCTTCTGTGAC
ACTTTTTTTGGGGGCTTGGACCAGGCGCGACGGACCATCATGGACGCGCG
TCCGCACTACTATCTGGACGCCTTGATCACCCACCCGGATTATCGCCGGC
AGGGAGCGGCATCAATGCTCATCCAGTGGGGATGTGACCGTGCCGATCAG
GACGGGATCCCCATATGGGTTGATTCCAGTCAGGAGGGGGCCCAGATCTA
CCAGCGCTTCGGGTTTCGTGATGTCAGTGTGTTGGGAGTGACTCCGACCG
GGGCTATGTCCATGCGGCGGGATCCCGTTCATGGCGAGGCCGTGTAAATG
TTCCAAGTCCTCCCCGTTACAGAGGCTGACCTCCCCACTATGGTCGACTT
ATGGTACGACGCCTTTGGCGATCCCATCAACCGGCGGCTGTATCCCGATA
CCCCCGGGGCGCGCTCCTGGCTAGAGGACTACCACCGCGCCAGTCTTCAA
TCCCCTGATCAACATTTTCTTAAAATAGTCACGGATACCGCACCAACATC
TCCCCTGGTAGCGTTTGTGAAATGGGACTTCAACACTACCACCCCAGGTC
ACCACTTTCCACCCCGCCATGTCGATTTCGACCAGGCCTTCTGTGACACT
TTTTTTGGGGGCTTGGACCAGGCGCGACGGACCATCATGGACGCGCGTCC
GCACTACTATCTGGACGCCTTGATCACCCACCCGGATTATCGCCGGCAGG
GAGCGGCATCAATGCTCATCCAGTGGGGATGTGACCGTGCCGATCAGGAC
GGGATCCCCATATGGGTTGATTCCAGTCAGGAGGGGGCCCAGATCTACCA
GCGCTTCGGGTTTCGTGATGTCAGTGTGTTGGGAGTGACTCCGACCGGGG
CTATGTCCATGCGGCGGGATCCCGTTCATGGCGAGGCCGTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008080 | N-acetyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007772-T1.utr5p1 | KJC3_007772-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016181 |
| DBxref | InterPro:IPR000182 |
| DBxref | PFAM:PF13508 |
| DBxref | PFAM:PF00583 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:101256..102504 + |
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