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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:141862..144267+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007792-T2 ID=KJC3_007792-T2|Name=KJC3_007792-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2406bp|location=Sequence derived from alignment at ch6:141862..144267+ (Aspergillus niger KJC3) TCAATCACAAGCCATAGAAGAGCGACCCATTAAAACCTATCAATAGAATA
ACCCAGGCCGATAGAAACCAGATGGTTGCGCTTCGATCGTTGTTCATGGA
CGCTATCAACAACAGGAAGATGCGCTAGCCACACGGCGATTCATGAAGAC
GGTCCTGGAAGCGGGAACTCTTTTCCTAACGTCTCCTAGCATGATTCCTT
GTCAGGTAATTGAATGAGTTTAGATGCTGAGCATGAGCGGGCAGTATCAA
TTATGGCAAAGTTAGAACATTATAGCGCACCAAACGGACTACATCGCGTT
CCTGGGCATAGAATGTGTGGTAGGGCTGGCAATCTCTATCCTGCTCTGTG
CCTAAGTGCTTCCATCAGGGGAGATGAGAGCATAACCAAGGGTTCCGCTG
TCATTGAGGCGTGTTGATACGTTATCTACCATGGCGTGCTGGCGTGCTAG
TAAGCACTTAGCCCAAAGCGGATGTGCCGAAGATACCCAGAGAGATAAAC
AACCCAAGGGAGCTGCTGCCTGTGAGCGGAAACCCATTTATCAAGCACCT
AGGCTCAGGAAATGTGGTGGTCTTGGTTTGACTGATCGCATTGTTGTCTC
AAAGCCACCAGAACGCTTCACAGAAAGATGGATGAATGGAACGTCCTAAG
CGCAACGGCAACTCAACTTGGCCAGCTGCTGCGAGGAGGCCACACAAATA
GTGTGGATATCGTCAAGGCCTACCTCGCTCAAATCGACCGGCACAACAAA
GCTGGCCTGAAGCTACATGCAATCATCTCCGTCAATGCTGAGACTGCTCT
TGCTCAAGCAGCGACCCGCGACAACGAAAGATCAGAGGGCAAAGTCCGCA
GCCCACTTCATGGAATCCCGATCATCGTAAAAGATGCGATCATCACGTCC
GAGTCCCTAGGTTTACCAACCACGGTCGGCGCTTTCGCTTTCAAAGATAC
CTATGGACTGAAGAACGCATCTATCATAGATATCCTCCTGGAGCATGGCA
TGATCATCCTTGCAAAAGCCAGTTTGACGGAATTTTGCGGTCTGAAGGCG
ACTTGTATAACCGCCGGCTGGTCGGCAATCAACGGACAAACTCAGTCCGC
TTATATCGAGGGTGGTTTCCGATCGGACGATCTCTTCATCGGTCGCTCTG
GGCCAGGAGGCTCCTCGTCGGGGTCCGCAGTTGGGGTTTCAGCCGGCTTT
GCGCCGTTATCGCTGGGGACGGAAACTTCGGGCTCAGTCTGCATGCCGGC
AAATCGGGCAGGGCTGTACTCCATCACTGCGAGTCGAGGGAGTGTCCCCA
TAGAAGGAATCTTTCGCTTGAGCAAAGACTTTGATAAGTTGGGTGCTATG
GCCAAATGTCCCGAGGACCTCGGCCTGTTGATGCCGCTGCTCAATGGTTC
GCATTTGGAGCCTGTGACGTGGAGCGACATTTCGGTCGGTTTTGTCGATC
CGATTGTATGGGATGCATTTGGATTCCAAAAGAGCCAAGACAAAAATATA
GAAAGTCAGATTGTAAGTTATCTTATCATTGATTTCCAGGCGGGCTACAC
CTGACGCTTTATAGCTCGAGCGATACGAATGGGCAAAGGCAGAAATTACT
CGTCGGGGAGGCCGAGTTGTTTACCCCGTAGGTTTACCGACGATGGAGAG
CCTTTCCTTTGAAGGCAAGAGTGTCAACTACTCCGTTGCATGTGCGCTCA
TCACTTCTTACGACATGTGATCGATAATAGCTGATGAAAGTATAGTTCAT
GAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTCCTGGTAGATCCCGA
AGTCACATCAGTCCCAGAATTGATCCAATTCAATGAACAGCATGCCTCTT
CTGCCATGCCCCAGCGTAAGTAATTATCATGGCATCTAAAGAAGTCCAAA
TACTTATACCTCGTAGCACATACCGATCAAACTGATCTTAAGGAGACGCT
CAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCCAAGGCCTACGCTC
AGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCTACAAAGTAGTCGC
ATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCTGCGCAGTGGCTGC
TTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGATCGCTTGGAAGGTC
CTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGATTGCCAGCGCGGGG
GGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGAAACAGATTGTGGG
TGATTGGAAGATTCCCCCTCTGCTGTTCTGATGAAATTTATTGTGACCAT
TCCCGTCTTGATTGCCCGACTTTAATATGTGCTATGCGGGACTTTTGTAT
CTATTTAACATGTTGAGGGTCATAATAAGCCTATATGAAAAGCGACTTCA
TCGAAG back to topCoding sequence (CDS) from alignment at ch6:141862..144267+ >KJC3_007792-T2 ID=KJC3_007792-T2|Name=KJC3_007792-T2|organism=Aspergillus niger KJC3|type=CDS|length=8055bp|location=Sequence derived from alignment at ch6:141862..144267+ (Aspergillus niger KJC3) ATGGCGTGCTGGCGTGCTAGTAAGCACTTAGCCCAAAGCGGATGTGCCGA AGATACCCAGAGAGATAAACAACCCAAGGGAGCTGCTGCCTCCACCAGAA CGCTTCACAGAAAGATGGATGAATGGAACGTCCTAAGCGCAACGGCAACT CAACTTGGCCAGCTGCTGCGAGGAGGCCACACAAATAGTGTGGATATCGT CAAGGCCTACCTCGCTCAAATCGACCGGCACAACAAAGCTGGCCTGAAGC TACATGCAATCATCTCCGTCAATGCTGAGACTGCTCTTGCTCAAGCAGCG ACCCGCGACAACGAAAGATCAGAGGGCAAAGTCCGCAGCCCACTTCATGG AATCCCGATCATCGTAAAAGATGCGATCATCACGTCCGAGTCCCTAGGTT TACCAACCACGGTCGGCGCTTTCGCTTTCAAAGATACCTATGGACTGAAG AACGCATCTATCATAGATATCCTCCTGGAGCATGGCATGATCATCCTTGC AAAAGCCAGTTTGACGGAATTTTGCGGTCTGAAGGCGACTTGTATAACCG CCGGCTGGTCGGCAATCAACGGACAAACTCAGTCCGCTTATATCGAGGGT GGTTTCCGATCGGACGATCTCTTCATCGGTCGCTCTGGGCCAGGAGGCTC CTCGTCGGGGTCCGCAGTTGGGGTTTCAGCCGGCTTTGCGCCGTTATCGC TGGGGACGGAAACTTCGGGCTCAGTCTGCATGCCGGCAAATCGGGCAGGG CTGTACTCCATCACTGCGAGTCGAGGGAGTGTCCCCATAGAAGGAATCTT TCGCTTGAGCAAAGACTTTGATAAGTTGGGTGCTATGGCCAAATGTCCCG AGGACCTCGGCCTGTTGATGCCGCTGCTCAATGGTTCGCATTTGGAGCCT GTGACGTGGAGCGACATTTCGGTCGGTTTTGTCGATCCGATTGTATGGGA TGCATTTGGATTCCAAAAGAGCCAAGACAAAAATATAGAAAGTCAGATTC TCGAGCGATACGAATGGGCAAAGGCAGAAATTACTCGTCGGGGAGGCCGA GTTGTTTACCCCGTAGGTTTACCGACGATGGAGAGCCTTTCCTTTGAAGG CAAGAGTGTCAACTACTCCGTTGCATTTCATGAATTTCCAAGCCTATTGG AGGATTACTGCTCTCTCCTGGTAGATCCCGAAGTCACATCAGTCCCAGAA TTGATCCAATTCAATGAACAGCATGCCTCTTCTGCCATGCCCCAGCCACA TACCGATCAAACTGATCTTAAGGAGACGCTCAAGTCAACCATGACTGAGG AGACAGCTACAGCAGCCAAGGCCTACGCTCAGCGCTTAGCTGGTCCCGAC GGCATCGATGCCGCGCTACAAAGTAGTCGCATTAACCTGGTAATTGGACC GGGAGATTGTGCAATCTGCGCAGTGGCTGCTTTAGCAGGCTATCCAACCG CCATGGTCCCACTCGATCGCTTGGAAGGTCCTGGTGGGCTGGGCCAGCCC CAGGGGTTAATGCTGATTGCCAGCGCGGGGGGAGAAGCACAAATCCTGGC ATTTATGCAGCTGTGGAAACAGATTGTGGGTGATTGGAAGATTCCCCCTC TGCTGTTCTGAATGGCGTGCTGGCGTGCTAGTAAGCACTTAGCCCAAAGC GGATGTGCCGAAGATACCCAGAGAGATAAACAACCCAAGGGAGCTGCTGC CTCCACCAGAACGCTTCACAGAAAGATGGATGAATGGAACGTCCTAAGCG CAACGGCAACTCAACTTGGCCAGCTGCTGCGAGGAGGCCACACAAATAGT GTGGATATCGTCAAGGCCTACCTCGCTCAAATCGACCGGCACAACAAAGC TGGCCTGAAGCTACATGCAATCATCTCCGTCAATGCTGAGACTGCTCTTG CTCAAGCAGCGACCCGCGACAACGAAAGATCAGAGGGCAAAGTCCGCAGC CCACTTCATGGAATCCCGATCATCGTAAAAGATGCGATCATCACGTCCGA GTCCCTAGGTTTACCAACCACGGTCGGCGCTTTCGCTTTCAAAGATACCT ATGGACTGAAGAACGCATCTATCATAGATATCCTCCTGGAGCATGGCATG ATCATCCTTGCAAAAGCCAGTTTGACGGAATTTTGCGGTCTGAAGGCGAC TTGTATAACCGCCGGCTGGTCGGCAATCAACGGACAAACTCAGTCCGCTT ATATCGAGGGTGGTTTCCGATCGGACGATCTCTTCATCGGTCGCTCTGGG CCAGGAGGCTCCTCGTCGGGGTCCGCAGTTGGGGTTTCAGCCGGCTTTGC GCCGTTATCGCTGGGGACGGAAACTTCGGGCTCAGTCTGCATGCCGGCAA ATCGGGCAGGGCTGTACTCCATCACTGCGAGTCGAGGGAGTGTCCCCATA GAAGGAATCTTTCGCTTGAGCAAAGACTTTGATAAGTTGGGTGCTATGGC CAAATGTCCCGAGGACCTCGGCCTGTTGATGCCGCTGCTCAATGGTTCGC ATTTGGAGCCTGTGACGTGGAGCGACATTTCGGTCGGTTTTGTCGATCCG ATTGTATGGGATGCATTTGGATTCCAAAAGAGCCAAGACAAAAATATAGA AAGTCAGATTCTCGAGCGATACGAATGGGCAAAGGCAGAAATTACTCGTC GGGGAGGCCGAGTTGTTTACCCCGTAGGTTTACCGACGATGGAGAGCCTT TCCTTTGAAGGCAAGAGTGTCAACTACTCCGTTGCATTTCATGAATTTCC AAGCCTATTGGAGGATTACTGCTCTCTCCTGGTAGATCCCGAAGTCACAT CAGTCCCAGAATTGATCCAATTCAATGAACAGCATGCCTCTTCTGCCATG CCCCAGCCACATACCGATCAAACTGATCTTAAGGAGACGCTCAAGTCAAC CATGACTGAGGAGACAGCTACAGCAGCCAAGGCCTACGCTCAGCGCTTAG CTGGTCCCGACGGCATCGATGCCGCGCTACAAAGTAGTCGCATTAACCTG GTAATTGGACCGGGAGATTGTGCAATCTGCGCAGTGGCTGCTTTAGCAGG CTATCCAACCGCCATGGTCCCACTCGATCGCTTGGAAGGTCCTGGTGGGC TGGGCCAGCCCCAGGGGTTAATGCTGATTGCCAGCGCGGGGGGAGAAGCA CAAATCCTGGCATTTATGCAGCTGTGGAAACAGATTGTGGGTGATTGGAA GATTCCCCCTCTGCTGTTCTGAATGGCGTGCTGGCGTGCTAGTAAGCACT TAGCCCAAAGCGGATGTGCCGAAGATACCCAGAGAGATAAACAACCCAAG GGAGCTGCTGCCTCCACCAGAACGCTTCACAGAAAGATGGATGAATGGAA CGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCTGCTGCGAGGAGGCC ACACAAATAGTGTGGATATCGTCAAGGCCTACCTCGCTCAAATCGACCGG CACAACAAAGCTGGCCTGAAGCTACATGCAATCATCTCCGTCAATGCTGA GACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGAAAGATCAGAGGGCA AAGTCCGCAGCCCACTTCATGGAATCCCGATCATCGTAAAAGATGCGATC ATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTCGGCGCTTTCGCTTT CAAAGATACCTATGGACTGAAGAACGCATCTATCATAGATATCCTCCTGG AGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGACGGAATTTTGCGGT CTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCAATCAACGGACAAAC TCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGACGATCTCTTCATCG GTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCGCAGTTGGGGTTTCA GCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACTTCGGGCTCAGTCTG CATGCCGGCAAATCGGGCAGGGCTGTACTCCATCACTGCGAGTCGAGGGA GTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAGACTTTGATAAGTTG GGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTGTTGATGCCGCTGCT CAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGACATTTCGGTCGGTT TTGTCGATCCGATTGTATGGGATGCATTTGGATTCCAAAAGAGCCAAGAC AAAAATATAGAAAGTCAGATTCTCGAGCGATACGAATGGGCAAAGGCAGA AATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGTAGGTTTACCGACGA TGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACTACTCCGTTGCATTT CATGAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTCCTGGTAGATCC CGAAGTCACATCAGTCCCAGAATTGATCCAATTCAATGAACAGCATGCCT CTTCTGCCATGCCCCAGCCACATACCGATCAAACTGATCTTAAGGAGACG CTCAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCCAAGGCCTACGC TCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCTACAAAGTAGTC GCATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCTGCGCAGTGGCT GCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGATCGCTTGGAAGG TCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGATTGCCAGCGCGG GGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGAAACAGATTGTG GGTGATTGGAAGATTCCCCCTCTGCTGTTCTGAATGGCGTGCTGGCGTGC TAGTAAGCACTTAGCCCAAAGCGGATGTGCCGAAGATACCCAGAGAGATA AACAACCCAAGGGAGCTGCTGCCTCCACCAGAACGCTTCACAGAAAGATG GATGAATGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCTGCT GCGAGGAGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCGCTC AAATCGACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATCTCC GTCAATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGAAAG ATCAGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCGTAA AAGATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTCGGC GCTTTCGCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCATAGA TATCCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGACGG AATTTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCAATC AACGGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGACGA TCTCTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCGCAG TTGGGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACTTCG GGCTCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCACTGC GAGTCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAGACT TTGATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTGTTG ATGCCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGACAT TTCGGTCGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCCAAA AGAGCCAAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAATGG GCAAAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGTAGG TTTACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACTACT CCGTTGCATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTC CTGGTAGATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAATGA ACAGCATGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTGATC TTAAGGAGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCC AAGGCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCT ACAAAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCT GCGCAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGAT CGCTTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGAT TGCCAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGA AACAGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGAATGGCG TGCTGGCGTGCTAGTAAGCACTTAGCCCAAAGCGGATGTGCCGAAGATAC CCAGAGAGATAAACAACCCAAGGGAGCTGCTGCCTCCACCAGAACGCTTC ACAGAAAGATGGATGAATGGAACGTCCTAAGCGCAACGGCAACTCAACTT GGCCAGCTGCTGCGAGGAGGCCACACAAATAGTGTGGATATCGTCAAGGC CTACCTCGCTCAAATCGACCGGCACAACAAAGCTGGCCTGAAGCTACATG CAATCATCTCCGTCAATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGC GACAACGAAAGATCAGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCC GATCATCGTAAAAGATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAA CCACGGTCGGCGCTTTCGCTTTCAAAGATACCTATGGACTGAAGAACGCA TCTATCATAGATATCCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGC CAGTTTGACGGAATTTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCT GGTCGGCAATCAACGGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTC CGATCGGACGATCTCTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTC GGGGTCCGCAGTTGGGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGA CGGAAACTTCGGGCTCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTAC TCCATCACTGCGAGTCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTT GAGCAAAGACTTTGATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACC TCGGCCTGTTGATGCCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACG TGGAGCGACATTTCGGTCGGTTTTGTCGATCCGATTGTATGGGATGCATT TGGATTCCAAAAGAGCCAAGACAAAAATATAGAAAGTCAGATTCTCGAGC GATACGAATGGGCAAAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTT TACCCCGTAGGTTTACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAG TGTCAACTACTCCGTTGCATTTCATGAATTTCCAAGCCTATTGGAGGATT ACTGCTCTCTCCTGGTAGATCCCGAAGTCACATCAGTCCCAGAATTGATC CAATTCAATGAACAGCATGCCTCTTCTGCCATGCCCCAGCCACATACCGA TCAAACTGATCTTAAGGAGACGCTCAAGTCAACCATGACTGAGGAGACAG CTACAGCAGCCAAGGCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATC GATGCCGCGCTACAAAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGA TTGTGCAATCTGCGCAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGG TCCCACTCGATCGCTTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGG TTAATGCTGATTGCCAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTAT GCAGCTGTGGAAACAGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGT TCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_007792-T2.utr5p1 | KJC3_007792-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_007792-T2.utr3p1 | KJC3_007792-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036928 |
DBxref | InterPro:IPR023631 |
DBxref | PFAM:PF01425 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:141862..144267 + |
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