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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:153373..155220+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007798-T2 ID=KJC3_007798-T2|Name=KJC3_007798-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1848bp|location=Sequence derived from alignment at ch6:153373..155220+ (Aspergillus niger KJC3)
CCGAGGATGTTCGGAGCACGAAGGAAGCCTGGCAAACCTTGCTTTCGCTG
CCAAGGCTCTCCTTTGTGGGAGTAGAAATTTTCAATGGCTGCAGAACTCC
TGTTTCTGCCTGGGCTATAGGAGGCTTCGCTTCTTCCCGATCGGCGTGAT
AAGAGGGGAGAATTGTCCTGGATATTGCAACTACGCCTGCCTGCATTGCA
GGGCGGACTCCGCCTGTTCAAGACATGTGGACGGCCATTGAACAGAGGGA
TGAGGCATCAAAAGCAGCCTATAACAGCAATGTCCAACTATGGACCCTCT
ATGCGATCGGCTGTGCGGTGACGCTACTTAGAACTTATTCACAATGCAAG
GATCTGGGTTGGAGAAGGTTGCGCCTTGACGATTATCTGATATGGGTCGC
AATAGTAGGTACATTCCCAACCTAACCGTTTCTTATGTGGACATATGCTG
ATACACTCGCTCTCTGTAGTTATTTTACACCGCACAAGTGGCACTGGCGT
ATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACAGCATGACAGAG
GCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATATCGAGAAAGGTC
AGTCATTCAACCCCGATCCGGTGACTGGACATTGACGGACGCGGTCAATA
GAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATATACAGCG
TTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTCGACTGAT
GGTATGTTTGTTGGGGATGGTCATTCTGCTTTAGCAGGAGAGGGCTGACC
GTACTATAGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGG
GTTCGCCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTG
CGGCATGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGT
AGTAAGTTTGCGCTTCGCGACCCTAAACCATAATAGTCGCTCATGGTTTT
CTACTAGATTCCTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAAC
CTTCGCCGCAAATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCC
CGATGCTTTGGAAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACG
ATAGTACTTGGTGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAG
TGTTTTTCTGTTGGTGGTAAGGCATTGCCAGCGCCCCTTTGCTTGGCATA
CATGCAGAGCCATGGCTTATTTCCCTCATAGGAACCCAACAATGGAGCGT
CGATAGCAGACGAATGGGGCACACGAGAGACATTCGTCGCCGTGATCACC
ACAAATCTCCCTATGGTGTTCCACCTGCTACGGACCTGGCTGGCCCGGGG
ATTTGGCAGCGCCTTCCAATCGTCGCAGCGAACCTACCAGCTTCCATCAG
GAGGACTTCAGAACACCGGTGGCGGTACTACTCGGAGAAGAGGCCGAGGA
GGTACCAGCAGCCGGGATCCGATCACCGTCGGCTTGACGTTTACCGAGAG
TGAAGAACGAATGATGCAGGACATTAAGCTGCAGACACTGGAGCCACATG
AAGCCCCCACAGCTGGTGCCATCATGGTCTCGAATCAGATCGAAGTCACC
CATCAGACGCGAAACAGTCATGCCGAGGAGCCGTCTGCACCGAGAGAAAA
TGCAAATTGGTAGCATTCGGTCCGCAGCCGAGGATTTTCATACCTAGTTT
GTTCTTATAATAATAAGATTTGGAAATGCGTAATTTTCAGTACAAGCGGG
GTGCTCTTGATTAAGCAGGACAGGCTGACTAGTAAGGACATTTGGCCC back to topCoding sequence (CDS) from alignment at ch6:153373..155220+ >KJC3_007798-T2 ID=KJC3_007798-T2|Name=KJC3_007798-T2|organism=Aspergillus niger KJC3|type=CDS|length=4245bp|location=Sequence derived from alignment at ch6:153373..155220+ (Aspergillus niger KJC3)
ATGTGGACGGCCATTGAACAGAGGGATGAGGCATCAAAAGCAGCCTATAA
CAGCAATGTCCAACTATGGACCCTCTATGCGATCGGCTGTGCGGTGACGC
TACTTAGAACTTATTCACAATGCAAGGATCTGGGTTGGAGAAGGTTGCGC
CTTGACGATTATCTGATATGGGTCGCAATATTATTTTACACCGCACAAGT
GGCACTGGCGTATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACA
GCATGACAGAGGCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATAT
CGAGAAAGAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATA
TACAGCGTTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTC
GACTGATGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGGG
TTCGCCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTGC
GGCATGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGTA
ATTCCTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAACCTTCGCC
GCAAATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCCCGATGCT
TTGGAAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACGATAGTAC
TTGGTGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAGTGTTTTT
CTGTTGGTGGTAAGGCATTGCCAGCGCCCCTTTGCTTGGCATACATGCAG
AGCCATGGCTTATTTCCCTCATAGGAACCCAACAATGGAGCGTCGATAGA
TGTGGACGGCCATTGAACAGAGGGATGAGGCATCAAAAGCAGCCTATAAC
AGCAATGTCCAACTATGGACCCTCTATGCGATCGGCTGTGCGGTGACGCT
ACTTAGAACTTATTCACAATGCAAGGATCTGGGTTGGAGAAGGTTGCGCC
TTGACGATTATCTGATATGGGTCGCAATATTATTTTACACCGCACAAGTG
GCACTGGCGTATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACAG
CATGACAGAGGCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATATC
GAGAAAGAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATAT
ACAGCGTTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTCG
ACTGATGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGGGT
TCGCCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTGCG
GCATGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGTAA
TTCCTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAACCTTCGCCG
CAAATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCCCGATGCTT
TGGAAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACGATAGTACT
TGGTGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAGTGTTTTTC
TGTTGGTGGTAAGGCATTGCCAGCGCCCCTTTGCTTGGCATACATGCAGA
GCCATGGCTTATTTCCCTCATAGGAACCCAACAATGGAGCGTCGATAGAT
GTGGACGGCCATTGAACAGAGGGATGAGGCATCAAAAGCAGCCTATAACA
GCAATGTCCAACTATGGACCCTCTATGCGATCGGCTGTGCGGTGACGCTA
CTTAGAACTTATTCACAATGCAAGGATCTGGGTTGGAGAAGGTTGCGCCT
TGACGATTATCTGATATGGGTCGCAATATTATTTTACACCGCACAAGTGG
CACTGGCGTATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACAGC
ATGACAGAGGCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATATCG
AGAAAGAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATATA
CAGCGTTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTCGA
CTGATGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGGGTT
CGCCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTGCGG
CATGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGTAAT
TCCTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAACCTTCGCCGC
AAATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCCCGATGCTTT
GGAAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACGATAGTACTT
GGTGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAGTGTTTTTCT
GTTGGTGGTAAGGCATTGCCAGCGCCCCTTTGCTTGGCATACATGCAGAG
CCATGGCTTATTTCCCTCATAGGAACCCAACAATGGAGCGTCGATAGATG
TGGACGGCCATTGAACAGAGGGATGAGGCATCAAAAGCAGCCTATAACAG
CAATGTCCAACTATGGACCCTCTATGCGATCGGCTGTGCGGTGACGCTAC
TTAGAACTTATTCACAATGCAAGGATCTGGGTTGGAGAAGGTTGCGCCTT
GACGATTATCTGATATGGGTCGCAATATTATTTTACACCGCACAAGTGGC
ACTGGCGTATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACAGCA
TGACAGAGGCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATATCGA
GAAAGAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATATAC
AGCGTTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTCGAC
TGATGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGGGTTC
GCCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTGCGGC
ATGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGTAATT
CCTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAACCTTCGCCGCA
AATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCCCGATGCTTTG
GAAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACGATAGTACTTG
GTGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAGTGTTTTTCTG
TTGGTGGTAAGGCATTGCCAGCGCCCCTTTGCTTGGCATACATGCAGAGC
CATGGCTTATTTCCCTCATAGGAACCCAACAATGGAGCGTCGATAGATGT
GGACGGCCATTGAACAGAGGGATGAGGCATCAAAAGCAGCCTATAACAGC
AATGTCCAACTATGGACCCTCTATGCGATCGGCTGTGCGGTGACGCTACT
TAGAACTTATTCACAATGCAAGGATCTGGGTTGGAGAAGGTTGCGCCTTG
ACGATTATCTGATATGGGTCGCAATATTATTTTACACCGCACAAGTGGCA
CTGGCGTATAGTGTCGGCAATGTAGCCCATGGACTCGCAAACAACAGCAT
GACAGAGGCCCAGAGAGCTACGTTGGATCCAGGTAGCGCAGAATATCGAG
AAAGAATAATTGGCTCCAAGATACAAATTGCCGGCTGGGCCACATATACA
GCGTTGATCAACTCGCTCAAGTTGTCAATGCTGGTCTTCTACACTCGACT
GATGGATGGTCTCGGCCGTCGTTATCGCGTGCCCATCTGGATTGGGTTCG
CCCTCGTCATCGGAAGTTTTGTCGCCTGTATGATCACTATCCTTGCGGCA
TGCCGGCCCTTCAATAAGAATTGGCAAATCTACCCTGACCCCGGTAATTC
CTGTCAACCTGCCATTTCGAAGCCAGTGATCGCCGCAACCTTCGCCGCAA
ATCTCGCCACAGACCCATATTTGGTTTTGATACCGATCCCGATGCTTTGG
AAATCCAGCCTCAAGCTTGTGAAAAAGATTGCGGTGACGATAGTACTTGG
TGCGGGGATCTTTATTCTGGTGTGCGCGACAATCAAGAGTGTTTTTCTGT
TGGTGGTAAGGCATTGCCAGCGCCCCTTTGCTTGGCATACATGCAGAGCC
ATGGCTTATTTCCCTCATAGGAACCCAACAATGGAGCGTCGATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007798-T2.utr5p1 | KJC3_007798-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007798-T2.utr3p1 | KJC3_007798-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:153373..155220 + |
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