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KJC3_007801-T1, KJC3_007801-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007801-T1
Unique NameKJC3_007801-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:159980..161776-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007801-T1 ID=KJC3_007801-T1|Name=KJC3_007801-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1797bp|location=Sequence derived from alignment at ch6:159980..161776- (Aspergillus niger KJC3)
CTAAACATGGAGCAGAATATATTGCAGGAGTTCCTCGCCCTCATCTTCAC
ACCAATTGATACGAGATCCCCTTTTCTACTCCTTCAAAGATGAGTTTGAT
GTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTCG
AGAAACGCGCCACCGATGCATCCGCGTACTGCTCCGATTCTTCGGGTACC
TACAAGCTCTCGTCAATCACGGCCCCAGTTCAGGGAAGTGGCAGCCCGGG
CTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCACA
AGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATGCGACCGTCACG
TCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTCCTCAATGAGTT
GATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGCG
CATCTGATCTGTCTGGTGATCCGGTCTACACCTATGATGATAATGGAAAC
GAAGCAGATCCCTCACTTTCCGGCTTCGGTCTCGGCGACCGTGGCACTGC
TATGGCTGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAGG
TGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAATTGAATGGCGTG
ATTGATGGCAACGCGACTGATAACAACCTCAACGATGGCTACCTTACCAG
TGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTCG
TGAAATACATCCAAGCGTACGAAGCATTGGGAGCTACGGTCGATGCCATT
ACGATTCAGAATGAGCCGTTGAACAGTCAATCTGGATATCCCACCATGTA
TGTTTACGACTACGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCGG
CTCTCGCCGACGCTGGACTGAGCACGGAAATCTGGGCCTTCGATCACAAT
ACTGGTAAGTACCCCATTCTCGACAATCCTTGACAACTGCTAATAATCGA
CATCCAGATCATGCATCGTACCCTCAGACTGTGCTTGATGAAGCAAGCCA
ATACGTCGACACTGTAGCCTGGCACTGCTACGCTACTGATGTGGACTGGA
CCGTCCTCAGCCAGTTCTACAGCGCCAACCCTGGAGTCAAGCAATACATG
ACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAGGCTGCTGACTT
TACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCATGGCGTGGACTC
TGGGCACGAACACTGACGACGGTCCGCATTTGACCAGTGGTGGATGCGAC
GCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGCTATACTCTTAA
TACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCATGCCTCCTGGCG
CGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCGGGTGGCGATGGC
GTACAGTCGGTGGCGTCCCTGAACCCTGACGGAACGCGCACAGTCATTAT
TGAGAATATATTCAGTAACGATATTTACTTGACCCTGTCGACTGAGAGCG
GAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTGACTACTTGGGTC
CTGCCGGCCTTGTCTTGATCGGCTTGCATTGTTCTTGGCTTTGTGGAGCG
TACATGTGATAATGATCCTCTTGCTCGGATGCCTTGTTTTCGTGTCGTAT
CTAACAATTCTCCGGGGTTGCATGTATATTGAAGTACAATGTGCTATGGT
CATTATACATTAATAATTTTGTAAGGCTTCTACCGGGTGAGTTTAAG
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Coding sequence (CDS) from alignment at ch6:159980..161776-

>KJC3_007801-T1 ID=KJC3_007801-T1|Name=KJC3_007801-T1|organism=Aspergillus niger KJC3|type=CDS|length=2952bp|location=Sequence derived from alignment at ch6:159980..161776- (Aspergillus niger KJC3)
ATCATGCATCGTACCCTCAGACTGTGCTTGATGAAGCAAGCCAATACGTC
GACACTGTAGCCTGGCACTGCTACGCTACTGATGTGGACTGGACCGTCCT
CAGCCAGTTCTACAGCGCCAACCCTGGAGTCAAGCAATACATGACCGAAT
GCTGGACACCAGCTTCCGGATCATGGCACCAGGCTGCTGACTTTACCATG
GGCCCTCTGCAGAACTATGCGTCGGGGGTCATGGCGTGGACTCTGGGCAC
GAACACTGACGACGGTCCGCATTTGACCAGTGGTGGATGCGACGCCTGTC
AGGGCTTGGTCACCATCAACGATGATGACAGCTATACTCTTAATACTGCC
TACTACATGATGGCACAGTTTAGCAAGTTCATGCCTCCTGGCGCGACCGT
GTTGAACGGAACGGGGAGCTATACCTACTCGGGTGGCGATGGCGTACAGT
CGGTGGCGTCCCTGAACCCTGACGGAACGCGCACAGTCATTATTGAGAAT
ATATTCAGTAACGATATTTACTTGACCCTGTCGACTGAGAGCGGAGAGGA
GTGGAGTGGAAATATCCCCAGTGAATCGGTGACTACTTGGGTCCTGCCGG
CCTTGTCTTGAATGAGTTTGATGTTGTGGTATACTATAGCTGGCCTAGCA
TCTCTAGGCCATGCTTCTCTCGAGAAACGCGCCACCGATGCATCCGCGTA
CTGCTCCGATTCTTCGGGTACCTACAAGCTCTCGTCAATCACGGCCCCAG
TTCAGGGAAGTGGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATT
GACGATACATCATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGC
TGTGACCGATGCGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCC
TCCAACAGCTCCTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCT
CTCATGCGCCATACCATCGGCGCATCTGATCTGTCTGGTGATCCGGTCTA
CACCTATGATGATAATGGAAACGAAGCAGATCCCTCACTTTCCGGCTTCG
GTCTCGGCGACCGTGGCACTGCTATGGCTGAAATGTTGGCCACGATGAAA
TCGTTGCAGTCAGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGG
ATGGATGAAATTGAATGGCGTGATTGATGGCAACGCGACTGATAACAACC
TCAACGATGGCTACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCC
AGTGCTTTCGCGCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATT
GGGAGCTACGGTCGATGCCATTACGATTCAGAATGAGCCGTTGAACAGTC
AATCTGGATATCCCACCATGTATGTTTACGACTACGAGTCTGCGCAGCTG
ATCCAAAAATACATTGGACCGGCTCTCGCCGACGCTGGACTGAGCACGGA
AATCTGGGCCTTCGATCACAATACTGATCATGCATCGTACCCTCAGACTG
TGCTTGATGAAGCAAGCCAATACGTCGACACTGTAGCCTGGCACTGCTAC
GCTACTGATGTGGACTGGACCGTCCTCAGCCAGTTCTACAGCGCCAACCC
TGGAGTCAAGCAATACATGACCGAATGCTGGACACCAGCTTCCGGATCAT
GGCACCAGGCTGCTGACTTTACCATGGGCCCTCTGCAGAACTATGCGTCG
GGGGTCATGGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTT
GACCAGTGGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATG
ATGACAGCTATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGC
AAGTTCATGCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATAC
CTACTCGGGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGACG
GAACGCGCACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTG
ACCCTGTCGACTGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGA
ATCGGTGACTACTTGGGTCCTGCCGGCCTTGTCTTGAATGAGTTTGATGT
TGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTCGAG
AAACGCGCCACCGATGCATCCGCGTACTGCTCCGATTCTTCGGGTACCTA
CAAGCTCTCGTCAATCACGGCCCCAGTTCAGGGAAGTGGCAGCCCGGGCT
CAGCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCACAAG
CAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATGCGACCGTCACGTC
TTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTCCTCAATGAGTTGA
TGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGCGCA
TCTGATCTGTCTGGTGATCCGGTCTACACCTATGATGATAATGGAAACGA
AGCAGATCCCTCACTTTCCGGCTTCGGTCTCGGCGACCGTGGCACTGCTA
TGGCTGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAGGTG
CTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAATTGAATGGCGTGAT
TGATGGCAACGCGACTGATAACAACCTCAACGATGGCTACCTTACCAGTG
GTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTCGTG
AAATACATCCAAGCGTACGAAGCATTGGGAGCTACGGTCGATGCCATTAC
GATTCAGAATGAGCCGTTGAACAGTCAATCTGGATATCCCACCATGTATG
TTTACGACTACGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCGGCT
CTCGCCGACGCTGGACTGAGCACGGAAATCTGGGCCTTCGATCACAATAC
TG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NEG1KJC3_007801Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007801-T1KJC3_007801-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007801-T1.cdsKJC3_007801-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007801-T1.utr3p1KJC3_007801-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007801-T1.exon2KJC3_007801-T1.exon2Aspergillus niger KJC3exon
KJC3_007801-T1.exon1KJC3_007801-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007801-T1.utr5p1KJC3_007801-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH30_6
NoteCAZy:GH30_7
NoteCAZy:GH30_2
NoteCAZy:GH30_1
NoteCAZy:GH30
NoteCAZy:GH30_3
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR033452
DBxrefInterPro:IPR033453
DBxrefPFAM:PF17189
DBxrefPFAM:PF02055
Product6-beta-D-glucanase neg1
ProductEndo-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:159980..161776 -
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