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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:162548..165007+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007803-T1 ID=KJC3_007803-T1|Name=KJC3_007803-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2460bp|location=Sequence derived from alignment at ch6:162548..165007+ (Aspergillus niger KJC3)
GACCTGAGATTCTTCTCTTTTATTTTTCTTCATACCATGCCAGAGTCTAT
CTTTTTAGATCTTCCCAGTATTCGAAGTGTACGACCCCTGCTATCTGCCA
TCAAGCTTCTCTCACTGCACACTTGTAGGAGGTAACTTCCCGCGAGGCAA
TAGGAACCACCCACGGCAGTCCCCGTCAGCCCGACCGTCAGACTCCCGGT
TTCTCCCCCATGGATAGGCAGAAACATCTGGCCTCCCAACTCTGTGCAAC
ATAAATTCCCTGTATCTGACCCCTCTTTCGCCAGCCATACATCTCTGTTA
CCACTTCTTCTTCATCATTATCACCGTCATCGACCATGGATGAATCCAAG
CCAGAACAAGATAACTCTGCCACATCGGATCAGAGTACCCTAGCCGCCAT
GCAGGACTTGACAGTATCGATCCAGAGTCTAGTGAGCCTACTTCGCCAGG
AAAGTGAGCGGCGAGAATTGCAAGTGAATCCAAAGAAAGCTAAAGACAAT
GATCCAATCCTGAATGCTCTCGGTGAGGAAATTGCAGCTGGGCGGGCAAC
GCACATCCCGGAAGGGAGCCCAGTGCAGCTCATGTCGCAAGAAGAGATTG
ATGAAAAGAATGAAGCGCATAGGGAGAAATACACAGGTATGATGATTTGA
CCCCCCCTCATCCCCAAAACTCGATGAATCCGAAGCGATACTAACACATT
GCAGCCTTCTGGAAGGATTTGCCGTCCTCACCAACTGACATGCAAACCAC
TGAAGATGCCTACCAATGGGCTTTTGACCTATATCCTCAAATCTATCACT
CTTTGGGATGGCATAAGAATGAGGATCTTCTTTTCGCTGCAAATATCCTA
TCAAAACATCGTGACGACCTTCTAGAAGCACTCTTCGCCGTTGAAGCATA
TCGGCGTCAGCAACTCGATGGTCCCCTGGAGCCATCACGCGCGGCCTTCG
AATATTCACGGTTGCCTCGCCTGCTTTTGATACTTGTTCGCCTAGAAGCC
CGACGGAATGATGCTCGGGAATGCCGCAACGGAGCTTGTGTGGATTGTCG
CTACTTCGATGCGGACCAGACCCTCCAGGTTCTGATTGAAGTGGGTCGAA
CACTGCGCCACGACAAACACTGGAGGGCGAATGGCACAACTCTGCAGGAA
CTGCTGCATCGCTGTTATGCCCGGCGTATTCTATCTCAACCTAATGCTGA
TAATCCTGATATTCTGCGATACCAGTTCCATCTCATTTACGACTGCCTGG
ATGCGTTGAACTTTACGTCGCGGTTCCGCGAGATTCGAGATGCGCTCTGT
CTTACATTCTATACCAGATATCAAACGGAGCCGATTCACAAGATATTTGA
CATGGTCCAGCGTCACAGAAGCTCTCTCAAGGGCATAGAGGAATTCAAAG
AGCTTCCGCTGGAAGAATCTCCTGGCCCGACTTTCTTTCCAGAGACGCTC
ACGGTTCAGCACCTGCAGAATTTTGGCGACTTGAGAATTGAATGGACAGA
CAATCTGGATGACCATCTCAAAATATTCACGGGTCGCAATGCGCTCAGGG
TCTTTGCTCATCCCACATTCTTCTACAATTGTCAAGATCTCGTGGAAAGA
GATTATATCGAACCCATGTATCTCGAATTGTCTCGGACATACGCCCTTCT
TTTTAGGCCTTCATCCCGACCGGCACTGCGACTGCTGCGAGAAGCAACTA
GGTCAGACGAGATCACCTGGCTGGGAAGGAAGATTGATCTGAGTCTCCAT
CGACCGGGTATGGAACAGGGCACTGGCAAATCTTTTGATATCGATCTGGC
CAAGCCATCAACAACCCGTATCTTGGAGAACTTCCATCGCTGCTCTGTTC
CGCCCAGCATTCAGGCCGCTTTCAACGTCGACAGCCCCTTTGTCAACATC
AAGGATACCAGCTCCTTCAACCAACACAAGTTCACATCCAGCTCCATGGG
GCAGATCCATAGTCTTGTTCCATTCTATCCTGAAGACATCACGTTTATGA
TAACGTCTATCTTTCAGCACGAGTTTCATGCCAACGAGCCTTTCATAACC
TATGAGTACTTTGGTCCTCGATTGCGCCGGCTCAAAACATACTTGGACAA
TCAGCAGCCCACTACCCTGAAACAGCTGTGGTTTGACAGGAGAGATGCCC
GGGAGTGGTGGACATTCTGGGGTGGCGCTTTCTTTCTCGTTGTGTTTGCG
GTGCTGGCTGCTGTCAATGTGAGATTCCTGTTTTTGCTTTGAGTTAGCCC
CGCTTCCGGGCCAGTGACCCAACTAGCAGATGGAATCCAAAACATCTAAT
ATCTGCAGTAGCTGGATCTCGTACCTCAGAGGCATGTCAGGAACACCAAG
CTGCTAATCCAACTTATGAGGACGGTTCTGTTCCTTGGTTTTCACGTCTG
TTCCCCATAGTAGTTCAAATACACCCACATAATGCTGTAGGAACGACTGA
TGTCAGTCCC back to topCoding sequence (CDS) from alignment at ch6:162548..165007+ >KJC3_007803-T1 ID=KJC3_007803-T1|Name=KJC3_007803-T1|organism=Aspergillus niger KJC3|type=CDS|length=3678bp|location=Sequence derived from alignment at ch6:162548..165007+ (Aspergillus niger KJC3)
ATGGATGAATCCAAGCCAGAACAAGATAACTCTGCCACATCGGATCAGAG
TACCCTAGCCGCCATGCAGGACTTGACAGTATCGATCCAGAGTCTAGTGA
GCCTACTTCGCCAGGAAAGTGAGCGGCGAGAATTGCAAGTGAATCCAAAG
AAAGCTAAAGACAATGATCCAATCCTGAATGCTCTCGGTGAGGAAATTGC
AGCTGGGCGGGCAACGCACATCCCGGAAGGGAGCCCAGTGCAGCTCATGT
CGCAAGAAGAGATTGATGAAAAGAATGAAGCGCATAGGGAGAAATACACA
GCCTTCTGGAAGGATTTGCCGTCCTCACCAACTGACATGCAAACCACTGA
AGATGCCTACCAATGGGCTTTTGACCTATATCCTCAAATCTATCACTCTT
TGGGATGGCATAAGAATGAGGATCTTCTTTTCGCTGCAAATATCCTATCA
AAACATCGTGACGACCTTCTAGAAGCACTCTTCGCCGTTGAAGCATATCG
GCGTCAGCAACTCGATGGTCCCCTGGAGCCATCACGCGCGGCCTTCGAAT
ATTCACGGTTGCCTCGCCTGCTTTTGATACTTGTTCGCCTAGAAGCCCGA
CGGAATGATGCTCGGGAATGCCGCAACGGAGCTTGTGTGGATTGTCGCTA
CTTCGATGCGGACCAGACCCTCCAGGTTCTGATTGAAGTGGGTCGAACAC
TGCGCCACGACAAACACTGGAGGGCGAATGGCACAACTCTGCAGGAACTG
CTGCATCGCTGTTATGCCCGGCGTATTCTATCTCAACCTAATGCTGATAA
TCCTGATATTCTGCGATACCAGTTCCATCTCATTTACGACTGCCTGGATG
CGTTGAACTTTACGTCGCGGTTCCGCGAGATTCGAGATGCGCTCTGTCTT
ACATTCTATACCAGATATCAAACGGAGCCGATTCACAAGATATTTGACAT
GGTCCAGCGTCACAGAAGCTCTCTCAAGGGCATAGAGGAATTCAAAGAGC
TTCCGCTGGAAGAATCTCCTGGCCCGACTTTCTTTCCAGAGACGCTCACG
GTTCAGCACCTGCAGAATTTTGGCGACTTGAGAATTGAATGGACAGACAA
TCTGGATGACCATCTCAAAATATTCACGGGTCGCAATGCGCTCAGGGTCT
TTGCTCATCCCACATTCTTCTACAATTGTCAAGATCTCGTGGAAAGAGAT
TATATCGAACCCATGTATCTCGAATTGTCTCGGACATACGCCCTTCTTTT
TAGGCCTTCATCCCGACCGGCACTGCGACTGCTGCGAGAAGCAACTAGGT
CAGACGAGATCACCTGGCTGGGAAGGAAGATTGATCTGAGTCTCCATCGA
CCGGGTATGGAACAGGGCACTGGCAAATCTTTTGATATCGATCTGGCCAA
GCCATCAACAACCCGTATCTTGGAGAACTTCCATCGCTGCTCTGTTCCGC
CCAGCATTCAGGCCGCTTTCAACGTCGACAGCCCCTTTGTCAACATCAAG
GATACCAGCTCCTTCAACCAACACAAGTTCACATCCAGCTCCATGGGGCA
GATCCATAGTCTTGTTCCATTCTATCCTGAAGACATCACGTTTATGATAA
CGTCTATCTTTCAGCACGAGTTTCATGCCAACGAGCCTTTCATAACCTAT
GAGTACTTTGGTCCTCGATTGCGCCGGCTCAAAACATACTTGGACAATCA
GCAGCCCACTACCCTGAAACAGCTGTGGTTTGACAGGAGAGATGCCCGGG
AGTGGTGGACATTCTGGGGTGGCGCTTTCTTTCTCGTTGTGTTTGCGGTG
CTGGCTGCTGTCAATGTGAGATTCCTGTTTTTGCTTTGAATGGATGAATC
CAAGCCAGAACAAGATAACTCTGCCACATCGGATCAGAGTACCCTAGCCG
CCATGCAGGACTTGACAGTATCGATCCAGAGTCTAGTGAGCCTACTTCGC
CAGGAAAGTGAGCGGCGAGAATTGCAAGTGAATCCAAAGAAAGCTAAAGA
CAATGATCCAATCCTGAATGCTCTCGGTGAGGAAATTGCAGCTGGGCGGG
CAACGCACATCCCGGAAGGGAGCCCAGTGCAGCTCATGTCGCAAGAAGAG
ATTGATGAAAAGAATGAAGCGCATAGGGAGAAATACACAGCCTTCTGGAA
GGATTTGCCGTCCTCACCAACTGACATGCAAACCACTGAAGATGCCTACC
AATGGGCTTTTGACCTATATCCTCAAATCTATCACTCTTTGGGATGGCAT
AAGAATGAGGATCTTCTTTTCGCTGCAAATATCCTATCAAAACATCGTGA
CGACCTTCTAGAAGCACTCTTCGCCGTTGAAGCATATCGGCGTCAGCAAC
TCGATGGTCCCCTGGAGCCATCACGCGCGGCCTTCGAATATTCACGGTTG
CCTCGCCTGCTTTTGATACTTGTTCGCCTAGAAGCCCGACGGAATGATGC
TCGGGAATGCCGCAACGGAGCTTGTGTGGATTGTCGCTACTTCGATGCGG
ACCAGACCCTCCAGGTTCTGATTGAAGTGGGTCGAACACTGCGCCACGAC
AAACACTGGAGGGCGAATGGCACAACTCTGCAGGAACTGCTGCATCGCTG
TTATGCCCGGCGTATTCTATCTCAACCTAATGCTGATAATCCTGATATTC
TGCGATACCAGTTCCATCTCATTTACGACTGCCTGGATGCGTTGAACTTT
ACGTCGCGGTTCCGCGAGATTCGAGATGCGCTCTGTCTTACATTCTATAC
CAGATATCAAACGGAGCCGATTCACAAGATATTTGACATGGTCCAGCGTC
ACAGAAGCTCTCTCAAGGGCATAGAGGAATTCAAAGAGCTTCCGCTGGAA
GAATCTCCTGGCCCGACTTTCTTTCCAGAGACGCTCACGGTTCAGCACCT
GCAGAATTTTGGCGACTTGAGAATTGAATGGACAGACAATCTGGATGACC
ATCTCAAAATATTCACGGGTCGCAATGCGCTCAGGGTCTTTGCTCATCCC
ACATTCTTCTACAATTGTCAAGATCTCGTGGAAAGAGATTATATCGAACC
CATGTATCTCGAATTGTCTCGGACATACGCCCTTCTTTTTAGGCCTTCAT
CCCGACCGGCACTGCGACTGCTGCGAGAAGCAACTAGGTCAGACGAGATC
ACCTGGCTGGGAAGGAAGATTGATCTGAGTCTCCATCGACCGGGTATGGA
ACAGGGCACTGGCAAATCTTTTGATATCGATCTGGCCAAGCCATCAACAA
CCCGTATCTTGGAGAACTTCCATCGCTGCTCTGTTCCGCCCAGCATTCAG
GCCGCTTTCAACGTCGACAGCCCCTTTGTCAACATCAAGGATACCAGCTC
CTTCAACCAACACAAGTTCACATCCAGCTCCATGGGGCAGATCCATAGTC
TTGTTCCATTCTATCCTGAAGACATCACGTTTATGATAACGTCTATCTTT
CAGCACGAGTTTCATGCCAACGAGCCTTTCATAACCTATGAGTACTTTGG
TCCTCGATTGCGCCGGCTCAAAACATACTTGGACAATCAGCAGCCCACTA
CCCTGAAACAGCTGTGGTTTGACAGGAGAGATGCCCGGGAGTGGTGGACA
TTCTGGGGTGGCGCTTTCTTTCTCGTTGTGTTTGCGGTGCTGGCTGCTGT
CAATGTGAGATTCCTGTTTTTGCTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007803-T1.utr5p1 | KJC3_007803-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007803-T1.utr3p1 | KJC3_007803-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:162548..165007 + |
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