You are here

Home

KJC3_007804-T1, KJC3_007804-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007804-T1
Unique NameKJC3_007804-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:165812..167153-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007804-T1 ID=KJC3_007804-T1|Name=KJC3_007804-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1342bp|location=Sequence derived from alignment at ch6:165812..167153- (Aspergillus niger KJC3)
ATGCAGGTCTTTGAGAGGCGAGAGAACTTGTCGCCGAAGGGGAGTGGACT
GCTAATTCGTCCTGGCGCGTCTCGCATTCTTCAGTCTTGGGGCCTTGGAG
ACGCCATTGAACAAGTCGCGGACAACTGTCTCCCGGACTCCATCAGAGAC
CTGAAGACCGGAAAGGACAAGATACGCACTTTGCCAGCATCTCTCACTAA
ATTTCCAGATTGGGGCATTCATCGACCCATTCTACAGGATATTCTCTACC
AACATGCCGTGCAAGCTGGGGCGGAAATTATCTTCGGCAGTTTCGTGGAA
GACTTCTCGGATAACCCCGGCGAAAGTCCAAGCTTACAGTTTCAAGGAGG
GAAAACAATAGGTGGCGATCTCATTCTCATTGCTGACGGGATTCAATCAC
GCTTGCGTACTAAAGTCTTGTTTGACGTATCCGTGGGCTGGTCGGTAGAC
CCGCAAGTGAGCGATTCGGTATTCTATGGCGTAACAGTGCCACAGAAAGA
ATTACAATCAGACACCGACGCCGCTTTATTGCTACAGCAATTTGAACCAT
GTGTCTGGGTAGGCGACGAACGTTTTGTTATTGGTCGGAAGCCCAGAAAA
ATGGGATTCTGGAGCGGCTTGTTCGGCCTCAAACATGATGATGGCCAAAC
CAGTATGTGGAGCGAGGTATGCATTTACTCCTAGGCAATCAATCTATTTT
GATACACTAAAAACTATCAAGGATGGAGATATCGTATTTGTGAGGCAGCA
TTTTGAGGGGATATGCCCTCCACTTTCTGCAGTTCTCAGCTTGGCGACCA
AGTGCGACAGGTGGAAGATTGCTCAAATGCCAAATCTTCCTCGCTGGACG
AGTAGGACTGGCAGAACCATTCTAATGGGTGACTCGGCCCATGCAATGGA
GCCCAATGCAGCACAGGTTAGCCTAACGTCAAGACTTTCAGGAATAATTG
AAAATACCCACAACTAGAGTCATACGCTAATTTTCTTGCGACAGGGGTTG
TCGCAAATTATCGAGGATATCGGGGCACTGCAGATATTGCTTCTGTCACT
TCCTTACTTGGATGTTTCTGTGATAAGTAGATTCTGGGAAAATATTCGAA
AGCCTCGAGTTGAACGCATCAAATCCTTTGCTGCTTGGAACACGCGAAGA
TTTCTCGGGCACAAAGATCATGCGGGCTCGCATCAGAAATATGCTGATAC
CGACTGGGAGTCCATCAAAGATATCGAACCGGATGCTGCTGCAGATTTTA
CAAGTCCTGCGTTTTTTAAGTGGGTCCACGACTACGATGTCGTTGAACAA
GTGAGTCTGTCCCCTGGGCTCGAGTGCATTCCATGCCCGTAA
back to top

Coding sequence (CDS) from alignment at ch6:165812..167153-

>KJC3_007804-T1 ID=KJC3_007804-T1|Name=KJC3_007804-T1|organism=Aspergillus niger KJC3|type=CDS|length=3627bp|location=Sequence derived from alignment at ch6:165812..167153- (Aspergillus niger KJC3)
GGGTTGTCGCAAATTATCGAGGATATCGGGGCACTGCAGATATTGCTTCT
GTCACTTCCTTACTTGGATGTTTCTGTGATAAGTAGATTCTGGGAAAATA
TTCGAAAGCCTCGAGTTGAACGCATCAAATCCTTTGCTGCTTGGAACACG
CGAAGATTTCTCGGGCACAAAGATCATGCGGGCTCGCATCAGAAATATGC
TGATACCGACTGGGAGTCCATCAAAGATATCGAACCGGATGCTGCTGCAG
ATTTTACAAGTCCTGCGTTTTTTAAGTGGGTCCACGACTACGATGTCGTT
GAACAAGTGAGTCTGTCCCCTGGGCTCGAGTGCATTCCATGCCCGTAAGA
TGGAGATATCGTATTTGTGAGGCAGCATTTTGAGGGGATATGCCCTCCAC
TTTCTGCAGTTCTCAGCTTGGCGACCAAGTGCGACAGGTGGAAGATTGCT
CAAATGCCAAATCTTCCTCGCTGGACGAGTAGGACTGGCAGAACCATTCT
AATGGGTGACTCGGCCCATGCAATGGAGCCCAATGCAGCACAGATGCAGG
TCTTTGAGAGGCGAGAGAACTTGTCGCCGAAGGGGAGTGGACTGCTAATT
CGTCCTGGCGCGTCTCGCATTCTTCAGTCTTGGGGCCTTGGAGACGCCAT
TGAACAAGTCGCGGACAACTGTCTCCCGGACTCCATCAGAGACCTGAAGA
CCGGAAAGGACAAGATACGCACTTTGCCAGCATCTCTCACTAAATTTCCA
GATTGGGGCATTCATCGACCCATTCTACAGGATATTCTCTACCAACATGC
CGTGCAAGCTGGGGCGGAAATTATCTTCGGCAGTTTCGTGGAAGACTTCT
CGGATAACCCCGGCGAAAGTCCAAGCTTACAGTTTCAAGGAGGGAAAACA
ATAGGTGGCGATCTCATTCTCATTGCTGACGGGATTCAATCACGCTTGCG
TACTAAAGTCTTGTTTGACGTATCCGTGGGCTGGTCGGTAGACCCGCAAG
TGAGCGATTCGGTATTCTATGGCGTAACAGTGCCACAGAAAGAATTACAA
TCAGACACCGACGCCGCTTTATTGCTACAGCAATTTGAACCATGTGTCTG
GGTAGGCGACGAACGTTTTGTTATTGGTCGGAAGCCCAGAAAAATGGGAT
TCTGGAGCGGCTTGTTCGGCCTCAAACATGATGATGGCCAAACCAGTATG
TGGAGCGAGGGGTTGTCGCAAATTATCGAGGATATCGGGGCACTGCAGAT
ATTGCTTCTGTCACTTCCTTACTTGGATGTTTCTGTGATAAGTAGATTCT
GGGAAAATATTCGAAAGCCTCGAGTTGAACGCATCAAATCCTTTGCTGCT
TGGAACACGCGAAGATTTCTCGGGCACAAAGATCATGCGGGCTCGCATCA
GAAATATGCTGATACCGACTGGGAGTCCATCAAAGATATCGAACCGGATG
CTGCTGCAGATTTTACAAGTCCTGCGTTTTTTAAGTGGGTCCACGACTAC
GATGTCGTTGAACAAGTGAGTCTGTCCCCTGGGCTCGAGTGCATTCCATG
CCCGTAAGATGGAGATATCGTATTTGTGAGGCAGCATTTTGAGGGGATAT
GCCCTCCACTTTCTGCAGTTCTCAGCTTGGCGACCAAGTGCGACAGGTGG
AAGATTGCTCAAATGCCAAATCTTCCTCGCTGGACGAGTAGGACTGGCAG
AACCATTCTAATGGGTGACTCGGCCCATGCAATGGAGCCCAATGCAGCAC
AGATGCAGGTCTTTGAGAGGCGAGAGAACTTGTCGCCGAAGGGGAGTGGA
CTGCTAATTCGTCCTGGCGCGTCTCGCATTCTTCAGTCTTGGGGCCTTGG
AGACGCCATTGAACAAGTCGCGGACAACTGTCTCCCGGACTCCATCAGAG
ACCTGAAGACCGGAAAGGACAAGATACGCACTTTGCCAGCATCTCTCACT
AAATTTCCAGATTGGGGCATTCATCGACCCATTCTACAGGATATTCTCTA
CCAACATGCCGTGCAAGCTGGGGCGGAAATTATCTTCGGCAGTTTCGTGG
AAGACTTCTCGGATAACCCCGGCGAAAGTCCAAGCTTACAGTTTCAAGGA
GGGAAAACAATAGGTGGCGATCTCATTCTCATTGCTGACGGGATTCAATC
ACGCTTGCGTACTAAAGTCTTGTTTGACGTATCCGTGGGCTGGTCGGTAG
ACCCGCAAGTGAGCGATTCGGTATTCTATGGCGTAACAGTGCCACAGAAA
GAATTACAATCAGACACCGACGCCGCTTTATTGCTACAGCAATTTGAACC
ATGTGTCTGGGTAGGCGACGAACGTTTTGTTATTGGTCGGAAGCCCAGAA
AAATGGGATTCTGGAGCGGCTTGTTCGGCCTCAAACATGATGATGGCCAA
ACCAGTATGTGGAGCGAGGGGTTGTCGCAAATTATCGAGGATATCGGGGC
ACTGCAGATATTGCTTCTGTCACTTCCTTACTTGGATGTTTCTGTGATAA
GTAGATTCTGGGAAAATATTCGAAAGCCTCGAGTTGAACGCATCAAATCC
TTTGCTGCTTGGAACACGCGAAGATTTCTCGGGCACAAAGATCATGCGGG
CTCGCATCAGAAATATGCTGATACCGACTGGGAGTCCATCAAAGATATCG
AACCGGATGCTGCTGCAGATTTTACAAGTCCTGCGTTTTTTAAGTGGGTC
CACGACTACGATGTCGTTGAACAAGTGAGTCTGTCCCCTGGGCTCGAGTG
CATTCCATGCCCGTAAGATGGAGATATCGTATTTGTGAGGCAGCATTTTG
AGGGGATATGCCCTCCACTTTCTGCAGTTCTCAGCTTGGCGACCAAGTGC
GACAGGTGGAAGATTGCTCAAATGCCAAATCTTCCTCGCTGGACGAGTAG
GACTGGCAGAACCATTCTAATGGGTGACTCGGCCCATGCAATGGAGCCCA
ATGCAGCACAGATGCAGGTCTTTGAGAGGCGAGAGAACTTGTCGCCGAAG
GGGAGTGGACTGCTAATTCGTCCTGGCGCGTCTCGCATTCTTCAGTCTTG
GGGCCTTGGAGACGCCATTGAACAAGTCGCGGACAACTGTCTCCCGGACT
CCATCAGAGACCTGAAGACCGGAAAGGACAAGATACGCACTTTGCCAGCA
TCTCTCACTAAATTTCCAGATTGGGGCATTCATCGACCCATTCTACAGGA
TATTCTCTACCAACATGCCGTGCAAGCTGGGGCGGAAATTATCTTCGGCA
GTTTCGTGGAAGACTTCTCGGATAACCCCGGCGAAAGTCCAAGCTTACAG
TTTCAAGGAGGGAAAACAATAGGTGGCGATCTCATTCTCATTGCTGACGG
GATTCAATCACGCTTGCGTACTAAAGTCTTGTTTGACGTATCCGTGGGCT
GGTCGGTAGACCCGCAAGTGAGCGATTCGGTATTCTATGGCGTAACAGTG
CCACAGAAAGAATTACAATCAGACACCGACGCCGCTTTATTGCTACAGCA
ATTTGAACCATGTGTCTGGGTAGGCGACGAACGTTTTGTTATTGGTCGGA
AGCCCAGAAAAATGGGATTCTGGAGCGGCTTGTTCGGCCTCAAACATGAT
GATGGCCAAACCAGTATGTGGAGCGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007804KJC3_007804Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007804-T1KJC3_007804-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007804-T1.cdsKJC3_007804-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007804-T1.exon3KJC3_007804-T1.exon3Aspergillus niger KJC3exon
KJC3_007804-T1.exon2KJC3_007804-T1.exon2Aspergillus niger KJC3exon
KJC3_007804-T1.exon1KJC3_007804-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR002938
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:165812..167153 -
Powered by Drupal