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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:197844..199853+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007815-T1 ID=KJC3_007815-T1|Name=KJC3_007815-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2010bp|location=Sequence derived from alignment at ch6:197844..199853+ (Aspergillus niger KJC3)
ATGGCTGATACACGAAAATTCAGTAAAGATGAGGATGAAAATCAAGTTCA
GGATTCAATAGAGATTGTGACAGTGACAGAACCTTCCCCAGATACTGCGG
TTGGAGAGACATCAGGCGGCTCTGATGAATCGGATCCAGAGCCATCAACG
GCTCGCCTTGTGCTGGTTCTATTTGGTCTCTGGGTGAGCCACTTCTGTCC
TCCCGCGCCTTTGATAGCGGTTTAATGTTCTAGGTTCTAATATTACACAC
TATAATTAGCTCGGAGTCTTGCTCAGTGCCCTAGGTATGTGCGCCCCTCC
TATCCCGCATACTCCGTCGTCGACAGCGATCAACCCCCTTCCCCAATGGG
TTCTGACACTTCAAAGACTCCACCATGCTTGCCACTATTATAGAAGACAT
TTGCGATGACTTCGATGCATTCTCTTCGTATTCCTGGATTGCTACCACCT
ATCCTATTGGACTCTCCATCTCGCAGCCATTTAGTGGACAGCTAACAAAC
CTCCTGGGCCGGCGATATGCCCTTGTACTTTGTCTCTCAGTATTGGCTGT
GGGACAGCTGCTGTGCGGACTGGCACCCACGTTGTCGGTCTTTTTGCTAG
GCCGAATCGTACAGGGTCTTGGCGCAGGCTGCATCGGCACCATCACAGCT
TTTGTCGAAACCGACCTGGTGTCCATGAGGAAGCGAGCGCTGATTGAAGG
CATTGGCAATATCACCTACGGTGTTACCTTGGCTCTGGGTGGCGTGTATG
GGGGCGGCGTCTCCAACGCCATTGGATGGAAGTGGGCCTTTCGGATTCAA
GTGCCATTTATAGTGCTTGACATTGCAATGGTCGCTTTCTACCTCAACAT
CCCTCAGGGTAAGAGCCGTCCGATCAGGCGCCCAGTCGATTATGTCGGTA
TGGTTGCACTTCTTGTTATCATCATCCTCTTCCAATTCGGCATGAACGCC
GCCGGTTCGGTGTTTTCGTGGGATAGCGCGGCCGTGCTGTCGACCCTGAT
TCTTGCCGGAGTGGGGTTTCTTGGGTTTATTCTATGGGAACTCTACAAAG
CCGAAAACCCTCACATTCCCATCCGAGCCTTGATGCAACGCACCGTGGCT
GCCTCGCAACTGAGCTCGTTCTTCTCCAACTTCGGCAACACCAGCATCAT
GTACTACGTGCCCGTATATTTGGAGGTCCTTGGCCATTCCCCCGGCCAAA
GTGGCCTGCGATTCGTCCCGCTGGCACTCTGCTTTGCGCTCGGCTCCTTC
GCCGCCGGATTCTTCGTCAAGGCTACAGCAAAGTACTACTACATCAATTT
CCCAGTTCAGGTTTGCTCTGTGCTCGGCGCAGTCATGCTCTGCACCATGA
CTCAGTCCACTCCCTCCTGGGCTCCCTTCGTCTATCTTGGCATCTACGGC
GCTGGGTCCGGTGGCGCCTACGTGACCAGACTCATGGGTCTTCTTACCTC
CACCGATAAGCAGCACCTGGCTGTGGTTCAATCATGTTCCTTCACCGTTC
GTAACACTGGCACTACCATCGGCCAGACCATCTCGGCCACCATCTTTCAA
AACTTATCGGTCAAGGCTATCAGTTCACTATTTCGCAATCAACCCGGTTT
GGCCGACCGGATCTCGCATAACTATAGCAATTTAGACCTGTTAAGTGGCA
TAGAGAAAGAGACCGCTATCCGCATATACCTCCGAGCAGCGCGTGGCGTA
TTCTTTCTCGCCATGGCGGTTCTGGCTGCCGCTGCGGTATCTACCTTCGT
TATGCAAAATAATGAGCTAGTCGATAGTCCCAAGGAGAAGGAGGAGACGA
AGGAAGAGAAGGAGAAGGAAAAGAAGGCGGCGTCATAGGTAACTCAAGAC
AATCAGATTGATAAAAGAACCACAGAATAAAAGCAACATACTTGTAGTTA
AAATGTGGAAAACCTGGTTTGTCGGAACTCTGTTTTTGCCATGATAGATG
ATTTGATTATGTTGGCGGGATTCAGAGGAGCTTAAAGATGGGAAAGAAAG
CCGGTTTGGG back to topCoding sequence (CDS) from alignment at ch6:197844..199853+ >KJC3_007815-T1 ID=KJC3_007815-T1|Name=KJC3_007815-T1|organism=Aspergillus niger KJC3|type=CDS|length=5040bp|location=Sequence derived from alignment at ch6:197844..199853+ (Aspergillus niger KJC3)
ATGGCTGATACACGAAAATTCAGTAAAGATGAGGATGAAAATCAAGTTCA
GGATTCAATAGAGATTGTGACAGTGACAGAACCTTCCCCAGATACTGCGG
TTGGAGAGACATCAGGCGGCTCTGATGAATCGGATCCAGAGCCATCAACG
GCTCGCCTTGTGCTGGTTCTATTTGGTCTCTGGCTCGGAGTCTTGCTCAG
TGCCCTAGACTCCACCATGCTTGCCACTATTATAGAAGACATTTGCGATG
ACTTCGATGCATTCTCTTCGTATTCCTGGATTGCTACCACCTATCCTATT
GGACTCTCCATCTCGCAGCCATTTAGTGGACAGCTAACAAACCTCCTGGG
CCGGCGATATGCCCTTGTACTTTGTCTCTCAGTATTGGCTGTGGGACAGC
TGCTGTGCGGACTGGCACCCACGTTGTCGGTCTTTTTGCTAGGCCGAATC
GTACAGGGTCTTGGCGCAGGCTGCATCGGCACCATCACAGCTTTTGTCGA
AACCGACCTGGTGTCCATGAGGAAGCGAGCGCTGATTGAAGGCATTGGCA
ATATCACCTACGGTGTTACCTTGGCTCTGGGTGGCGTGTATGGGGGCGGC
GTCTCCAACGCCATTGGATGGAAGTGGGCCTTTCGGATTCAAGTGCCATT
TATAGTGCTTGACATTGCAATGGTCGCTTTCTACCTCAACATCCCTCAGG
GTAAGAGCCGTCCGATCAGGCGCCCAGTCGATTATGTCGGTATGGTTGCA
CTTCTTGTTATCATCATCCTCTTCCAATTCGGCATGAACGCCGCCGGTTC
GGTGTTTTCGTGGGATAGCGCGGCCGTGCTGTCGACCCTGATTCTTGCCG
GAGTGGGGTTTCTTGGGTTTATTCTATGGGAACTCTACAAAGCCGAAAAC
CCTCACATTCCCATCCGAGCCTTGATGCAACGCACCGTGGCTGCCTCGCA
ACTGAGCTCGTTCTTCTCCAACTTCGGCAACACCAGCATCATGTACTACG
TGCCCGTATATTTGGAGGTCCTTGGCCATTCCCCCGGCCAAAGTGGCCTG
CGATTCGTCCCGCTGGCACTCTGCTTTGCGCTCGGCTCCTTCGCCGCCGG
ATTCTTCGTCAAGGCTACAGCAAAGTACTACTACATCAATTTCCCAGTTC
AGGTTTGCTCTGTGCTCGGCGCAGTCATGCTCTGCACCATGACTCAGTCC
ACTCCCTCCTGGGCTCCCTTCGTCTATCTTGGCATCTACGGCGCTGGGTC
CGGTGGCGCCTACGTGACCAGACTCATGGGTCTTCTTACCTCCACCGATA
AGCAGCACCTGGCTGTGGTTCAATCATGTTCCTTCACCGTTCGTAACACT
GGCACTACCATCGGCCAGACCATCTCGGCCACCATCTTTCAAAACTTATC
GGTCAAGGCTATCAGTTCACTATTTCGCAATCAACCCGGTTTGGCCGACC
GGATCTCGCATAACTATAGCAATTTAGACCTGTTAAGTGGCATAGAGAAA
GAGACCGCTATCCGCATATACCTCCGAGCAGCGCGTGGCGTATTCTTTCT
CGCCATGGCGGTTCTGGCTGCCGCTGCGGTATCTACCTTCGTTATGCAAA
ATAATGAGCTAGTCGATAGTCCCAAGGAGAAGGAGGAGACGAAGGAAGAG
AAGGAGAAGGAAAAGAAGGCGGCGTCATAGATGGCTGATACACGAAAATT
CAGTAAAGATGAGGATGAAAATCAAGTTCAGGATTCAATAGAGATTGTGA
CAGTGACAGAACCTTCCCCAGATACTGCGGTTGGAGAGACATCAGGCGGC
TCTGATGAATCGGATCCAGAGCCATCAACGGCTCGCCTTGTGCTGGTTCT
ATTTGGTCTCTGGCTCGGAGTCTTGCTCAGTGCCCTAGACTCCACCATGC
TTGCCACTATTATAGAAGACATTTGCGATGACTTCGATGCATTCTCTTCG
TATTCCTGGATTGCTACCACCTATCCTATTGGACTCTCCATCTCGCAGCC
ATTTAGTGGACAGCTAACAAACCTCCTGGGCCGGCGATATGCCCTTGTAC
TTTGTCTCTCAGTATTGGCTGTGGGACAGCTGCTGTGCGGACTGGCACCC
ACGTTGTCGGTCTTTTTGCTAGGCCGAATCGTACAGGGTCTTGGCGCAGG
CTGCATCGGCACCATCACAGCTTTTGTCGAAACCGACCTGGTGTCCATGA
GGAAGCGAGCGCTGATTGAAGGCATTGGCAATATCACCTACGGTGTTACC
TTGGCTCTGGGTGGCGTGTATGGGGGCGGCGTCTCCAACGCCATTGGATG
GAAGTGGGCCTTTCGGATTCAAGTGCCATTTATAGTGCTTGACATTGCAA
TGGTCGCTTTCTACCTCAACATCCCTCAGGGTAAGAGCCGTCCGATCAGG
CGCCCAGTCGATTATGTCGGTATGGTTGCACTTCTTGTTATCATCATCCT
CTTCCAATTCGGCATGAACGCCGCCGGTTCGGTGTTTTCGTGGGATAGCG
CGGCCGTGCTGTCGACCCTGATTCTTGCCGGAGTGGGGTTTCTTGGGTTT
ATTCTATGGGAACTCTACAAAGCCGAAAACCCTCACATTCCCATCCGAGC
CTTGATGCAACGCACCGTGGCTGCCTCGCAACTGAGCTCGTTCTTCTCCA
ACTTCGGCAACACCAGCATCATGTACTACGTGCCCGTATATTTGGAGGTC
CTTGGCCATTCCCCCGGCCAAAGTGGCCTGCGATTCGTCCCGCTGGCACT
CTGCTTTGCGCTCGGCTCCTTCGCCGCCGGATTCTTCGTCAAGGCTACAG
CAAAGTACTACTACATCAATTTCCCAGTTCAGGTTTGCTCTGTGCTCGGC
GCAGTCATGCTCTGCACCATGACTCAGTCCACTCCCTCCTGGGCTCCCTT
CGTCTATCTTGGCATCTACGGCGCTGGGTCCGGTGGCGCCTACGTGACCA
GACTCATGGGTCTTCTTACCTCCACCGATAAGCAGCACCTGGCTGTGGTT
CAATCATGTTCCTTCACCGTTCGTAACACTGGCACTACCATCGGCCAGAC
CATCTCGGCCACCATCTTTCAAAACTTATCGGTCAAGGCTATCAGTTCAC
TATTTCGCAATCAACCCGGTTTGGCCGACCGGATCTCGCATAACTATAGC
AATTTAGACCTGTTAAGTGGCATAGAGAAAGAGACCGCTATCCGCATATA
CCTCCGAGCAGCGCGTGGCGTATTCTTTCTCGCCATGGCGGTTCTGGCTG
CCGCTGCGGTATCTACCTTCGTTATGCAAAATAATGAGCTAGTCGATAGT
CCCAAGGAGAAGGAGGAGACGAAGGAAGAGAAGGAGAAGGAAAAGAAGGC
GGCGTCATAGATGGCTGATACACGAAAATTCAGTAAAGATGAGGATGAAA
ATCAAGTTCAGGATTCAATAGAGATTGTGACAGTGACAGAACCTTCCCCA
GATACTGCGGTTGGAGAGACATCAGGCGGCTCTGATGAATCGGATCCAGA
GCCATCAACGGCTCGCCTTGTGCTGGTTCTATTTGGTCTCTGGCTCGGAG
TCTTGCTCAGTGCCCTAGACTCCACCATGCTTGCCACTATTATAGAAGAC
ATTTGCGATGACTTCGATGCATTCTCTTCGTATTCCTGGATTGCTACCAC
CTATCCTATTGGACTCTCCATCTCGCAGCCATTTAGTGGACAGCTAACAA
ACCTCCTGGGCCGGCGATATGCCCTTGTACTTTGTCTCTCAGTATTGGCT
GTGGGACAGCTGCTGTGCGGACTGGCACCCACGTTGTCGGTCTTTTTGCT
AGGCCGAATCGTACAGGGTCTTGGCGCAGGCTGCATCGGCACCATCACAG
CTTTTGTCGAAACCGACCTGGTGTCCATGAGGAAGCGAGCGCTGATTGAA
GGCATTGGCAATATCACCTACGGTGTTACCTTGGCTCTGGGTGGCGTGTA
TGGGGGCGGCGTCTCCAACGCCATTGGATGGAAGTGGGCCTTTCGGATTC
AAGTGCCATTTATAGTGCTTGACATTGCAATGGTCGCTTTCTACCTCAAC
ATCCCTCAGGGTAAGAGCCGTCCGATCAGGCGCCCAGTCGATTATGTCGG
TATGGTTGCACTTCTTGTTATCATCATCCTCTTCCAATTCGGCATGAACG
CCGCCGGTTCGGTGTTTTCGTGGGATAGCGCGGCCGTGCTGTCGACCCTG
ATTCTTGCCGGAGTGGGGTTTCTTGGGTTTATTCTATGGGAACTCTACAA
AGCCGAAAACCCTCACATTCCCATCCGAGCCTTGATGCAACGCACCGTGG
CTGCCTCGCAACTGAGCTCGTTCTTCTCCAACTTCGGCAACACCAGCATC
ATGTACTACGTGCCCGTATATTTGGAGGTCCTTGGCCATTCCCCCGGCCA
AAGTGGCCTGCGATTCGTCCCGCTGGCACTCTGCTTTGCGCTCGGCTCCT
TCGCCGCCGGATTCTTCGTCAAGGCTACAGCAAAGTACTACTACATCAAT
TTCCCAGTTCAGGTTTGCTCTGTGCTCGGCGCAGTCATGCTCTGCACCAT
GACTCAGTCCACTCCCTCCTGGGCTCCCTTCGTCTATCTTGGCATCTACG
GCGCTGGGTCCGGTGGCGCCTACGTGACCAGACTCATGGGTCTTCTTACC
TCCACCGATAAGCAGCACCTGGCTGTGGTTCAATCATGTTCCTTCACCGT
TCGTAACACTGGCACTACCATCGGCCAGACCATCTCGGCCACCATCTTTC
AAAACTTATCGGTCAAGGCTATCAGTTCACTATTTCGCAATCAACCCGGT
TTGGCCGACCGGATCTCGCATAACTATAGCAATTTAGACCTGTTAAGTGG
CATAGAGAAAGAGACCGCTATCCGCATATACCTCCGAGCAGCGCGTGGCG
TATTCTTTCTCGCCATGGCGGTTCTGGCTGCCGCTGCGGTATCTACCTTC
GTTATGCAAAATAATGAGCTAGTCGATAGTCCCAAGGAGAAGGAGGAGAC
GAAGGAAGAGAAGGAGAAGGAAAAGAAGGCGGCGTCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007815-T1.utr3p1 | KJC3_007815-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.2 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:197844..199853 + |
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