|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:206451..207972- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007820-T1 ID=KJC3_007820-T1|Name=KJC3_007820-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1522bp|location=Sequence derived from alignment at ch6:206451..207972- (Aspergillus niger KJC3)
ATGTCGCGCATTCCACAATCTCGCCTTTGGCGATCCATCATCTTGTGTGT
TGTTTGGTCTCTCCCTTGCTTCCAGGTCCTGGCGATCGACCTCGATCTCC
AAAATCCTGGTGAGTTTCGCAGACCTTGATCAATATTTGGACCTCTGTTG
GAGGCTAACAGACACTTCTTGTCCCTTAGACAGCGTTAAGAGCGTCGCAA
GCGAACTCGCCTGGGACCTAGTCAGCTTCTATACGGGCAACAACACCGGC
GATGTTCCTGGAAACCTTCCAGATCCATACTACTGGTGGGAGGCGGGGGC
CTTCTTCGGCACCCTGGTCAATTACTGGGCCTACACCGGAGACACCACAT
ACAACGACCTGACCGCGCAAGCCATCCTCCACCAGGTCGGTCCCAACCGA
GATTTCATGCCCGCCAACCAGACGCGCACGGAGGGAAACGATGACCAGGC
GTTCTGGGCCTTCGCTGCTCTGCGCGCCGCCGAGCGAAACTTCCCCAATC
CCCCAGCCGACCAACCGTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAAC
GAACAAGCACAACGATGGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTG
GCAGATCTATACTTTCAACAGCGGCTACACATACCGGAATTCGATCTCGA
ACGGATGCTTCTTCAACATCGCGGCTCGACTCGCGCGATATACGGGCAAC
GCGACGTATGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGACGGACGT
AGGACTGATTGGACCGGAGTATCATGTGTTCGACGGGACGAGTGAGGAGA
ACAACTGCACCGACCTCAATCATATTGAGTGGACTTATAATAACGGGGTG
TTCCTGCTTGGGGCAGCACACATGTGGAACTATGTAAGTATGAGACCTGG
TCACTCTGCTCTGTTATGCGACGTACAACTAATGAGAAAGCAGACCAACG
GAGATGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGC
AGCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTCTACGAGGCCGC
ATGCGAGACCGTGGGGACCTGCCAAACGGACCAATTTTCGTTCAAGGCCT
ACCTGGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTAC
GATACCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCA
ATGTGTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGG
GGACCTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAA
GTTGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATAC
CACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAG
ATTCATCCCGAGACCCCAGTGAACTGCGCCCGATCACCACATCGGATCGA
ATCGGCGCAGGAGTAGTGACGGGGGTCACAGCATGCTTGGTGCTTGGGGT
CACGGCTTTCATGGTGTCGTAA back to topCoding sequence (CDS) from alignment at ch6:206451..207972- >KJC3_007820-T1 ID=KJC3_007820-T1|Name=KJC3_007820-T1|organism=Aspergillus niger KJC3|type=CDS|length=4176bp|location=Sequence derived from alignment at ch6:206451..207972- (Aspergillus niger KJC3)
ACCAACGGAGATGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGC
TCAGAGCAGCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTCTACG
AGGCCGCATGCGAGACCGTGGGGACCTGCCAAACGGACCAATTTTCGTTC
AAGGCCTACCTGGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTT
CACCTACGATACCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAG
CAGCCCAATGTGTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGG
ACCACGGGGACCTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGC
CTTGGAAGTTGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCA
CTCATACCACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAG
GCTTCAGATTCATCCCGAGACCCCAGTGAACTGCGCCCGATCACCACATC
GGATCGAATCGGCGCAGGAGTAGTGACGGGGGTCACAGCATGCTTGGTGC
TTGGGGTCACGGCTTTCATGGTGTCGTAAACAGCGTTAAGAGCGTCGCAA
GCGAACTCGCCTGGGACCTAGTCAGCTTCTATACGGGCAACAACACCGGC
GATGTTCCTGGAAACCTTCCAGATCCATACTACTGGTGGGAGGCGGGGGC
CTTCTTCGGCACCCTGGTCAATTACTGGGCCTACACCGGAGACACCACAT
ACAACGACCTGACCGCGCAAGCCATCCTCCACCAGGTCGGTCCCAACCGA
GATTTCATGCCCGCCAACCAGACGCGCACGGAGGGAAACGATGACCAGGC
GTTCTGGGCCTTCGCTGCTCTGCGCGCCGCCGAGCGAAACTTCCCCAATC
CCCCAGCCGACCAACCGTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAAC
GAACAAGCACAACGATGGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTG
GCAGATCTATACTTTCAACAGCGGCTACACATACCGGAATTCGATCTCGA
ACGGATGCTTCTTCAACATCGCGGCTCGACTCGCGCGATATACGGGCAAC
GCGACGTATGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGACGGACGT
AGGACTGATTGGACCGGAGTATCATGTGTTCGACGGGACGAGTGAGGAGA
ACAACTGCACCGACCTCAATCATATTGAGTGGACTTATAATAACGGGGTG
TTCCTGCTTGGGGCAGCACACATGTGGAACTATATGTCGCGCATTCCACA
ATCTCGCCTTTGGCGATCCATCATCTTGTGTGTTGTTTGGTCTCTCCCTT
GCTTCCAGGTCCTGGCGATCGACCTCGATCTCCAAAATCCTGACCAACGG
AGATGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGCA
GCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTCTACGAGGCCGCA
TGCGAGACCGTGGGGACCTGCCAAACGGACCAATTTTCGTTCAAGGCCTA
CCTGGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTACG
ATACCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCAA
TGTGTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGGG
GACCTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAAG
TTGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATACC
ACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAGA
TTCATCCCGAGACCCCAGTGAACTGCGCCCGATCACCACATCGGATCGAA
TCGGCGCAGGAGTAGTGACGGGGGTCACAGCATGCTTGGTGCTTGGGGTC
ACGGCTTTCATGGTGTCGTAAACAGCGTTAAGAGCGTCGCAAGCGAACTC
GCCTGGGACCTAGTCAGCTTCTATACGGGCAACAACACCGGCGATGTTCC
TGGAAACCTTCCAGATCCATACTACTGGTGGGAGGCGGGGGCCTTCTTCG
GCACCCTGGTCAATTACTGGGCCTACACCGGAGACACCACATACAACGAC
CTGACCGCGCAAGCCATCCTCCACCAGGTCGGTCCCAACCGAGATTTCAT
GCCCGCCAACCAGACGCGCACGGAGGGAAACGATGACCAGGCGTTCTGGG
CCTTCGCTGCTCTGCGCGCCGCCGAGCGAAACTTCCCCAATCCCCCAGCC
GACCAACCGTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAACGAACAAGC
ACAACGATGGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTGGCAGATCT
ATACTTTCAACAGCGGCTACACATACCGGAATTCGATCTCGAACGGATGC
TTCTTCAACATCGCGGCTCGACTCGCGCGATATACGGGCAACGCGACGTA
TGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGACGGACGTAGGACTGA
TTGGACCGGAGTATCATGTGTTCGACGGGACGAGTGAGGAGAACAACTGC
ACCGACCTCAATCATATTGAGTGGACTTATAATAACGGGGTGTTCCTGCT
TGGGGCAGCACACATGTGGAACTATATGTCGCGCATTCCACAATCTCGCC
TTTGGCGATCCATCATCTTGTGTGTTGTTTGGTCTCTCCCTTGCTTCCAG
GTCCTGGCGATCGACCTCGATCTCCAAAATCCTGACCAACGGAGATGAGA
ACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGCAGCTTCCTC
TCCACGAACGAGAGCTCCAAGAACGTGCTCTACGAGGCCGCATGCGAGAC
CGTGGGGACCTGCCAAACGGACCAATTTTCGTTCAAGGCCTACCTGGTGC
GGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTACGATACCATT
ATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCAATGTGTGGG
AGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGGGGACCTATG
ATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAAGTTGTCCAG
GCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATACCACGGGAGG
ATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAGATTCATCCC
GAGACCCCAGTGAACTGCGCCCGATCACCACATCGGATCGAATCGGCGCA
GGAGTAGTGACGGGGGTCACAGCATGCTTGGTGCTTGGGGTCACGGCTTT
CATGGTGTCGTAAACAGCGTTAAGAGCGTCGCAAGCGAACTCGCCTGGGA
CCTAGTCAGCTTCTATACGGGCAACAACACCGGCGATGTTCCTGGAAACC
TTCCAGATCCATACTACTGGTGGGAGGCGGGGGCCTTCTTCGGCACCCTG
GTCAATTACTGGGCCTACACCGGAGACACCACATACAACGACCTGACCGC
GCAAGCCATCCTCCACCAGGTCGGTCCCAACCGAGATTTCATGCCCGCCA
ACCAGACGCGCACGGAGGGAAACGATGACCAGGCGTTCTGGGCCTTCGCT
GCTCTGCGCGCCGCCGAGCGAAACTTCCCCAATCCCCCAGCCGACCAACC
GTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAACGAACAAGCACAACGAT
GGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTGGCAGATCTATACTTTC
AACAGCGGCTACACATACCGGAATTCGATCTCGAACGGATGCTTCTTCAA
CATCGCGGCTCGACTCGCGCGATATACGGGCAACGCGACGTATGCGGATT
GGGCGAATAAGGTCTGGGACTGGGTGACGGACGTAGGACTGATTGGACCG
GAGTATCATGTGTTCGACGGGACGAGTGAGGAGAACAACTGCACCGACCT
CAATCATATTGAGTGGACTTATAATAACGGGGTGTTCCTGCTTGGGGCAG
CACACATGTGGAACTATATGTCGCGCATTCCACAATCTCGCCTTTGGCGA
TCCATCATCTTGTGTGTTGTTTGGTCTCTCCCTTGCTTCCAGGTCCTGGC
GATCGACCTCGATCTCCAAAATCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0008496 | mannan endo-1,6-alpha-mannosidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016052 | carbohydrate catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.2 |
| Note | SECRETED:SignalP(1-28) |
| Note | CAZy:GH76 |
| DBxref | InterPro:IPR008928 |
| DBxref | InterPro:IPR014480 |
| DBxref | InterPro:IPR005198 |
| DBxref | PFAM:PF03663 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:206451..207972 - |
|
