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KJC3_007825-T1, KJC3_007825-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007825-T1
Unique NameKJC3_007825-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:216632..217878-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007825-T1 ID=KJC3_007825-T1|Name=KJC3_007825-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1247bp|location=Sequence derived from alignment at ch6:216632..217878- (Aspergillus niger KJC3)
GAGGGGTTAAAAGGGCCATCCTCCTCGCATCTGATTGTCCCTCCTCACCC
ATCCCCTACCAACCCGTCCTCTCCTACAAAGCTCTTTTCTTATATACTCG
CTTTGACCGCTCTGATACTCGTTATAACCGCACCAAGCAACTGTACGACG
ACACAATGCCTTCATTTTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAA
AACCTTATCGGGTACATCTTCAATGACCCGAAGCGTGCGATGGAAGCACT
AGTCGCTGCTGGGGTTTACATGCCCGGATTGATCAATCGCACGGATGGTC
ACAAGCAACTTGCCCTCGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCG
CTGGACGGATACGAAGCCCGAAAGGGCAGAGGTAGATATTATTCCATTTG
ACCAGAATCACATTCTCATCCCTTATGGCAGAATTCACCAACAATATCCT
CTCAACGAAGGCCGGCAACACATACATCGCCCAGGCTGGGCGTAACCTGG
GCCTGGACAAACTTGTCATTGTCAATCCAGCCCAGGCCGGAATGGTATCC
GACAAAGTCATGGCCAGCGCCGTTGAAGCTATTATCGGAGCTGTCTTCAT
GGACAGCGATGGCTCTGTTGAGTCCGTGCGACCTGTCCTGACTATTTTGG
GCCTTGGCTGGCCCGCTTGAGCTCCATGACTTTGCGTGAACTACCTATGC
AAAGTGACGTGATCTGGAAGCTAGTTGCTTACCAGTAGGGCGTACAAAGG
CCCGTCTGCATCGGTACCGGACTCCTGCTACGAGGAAGCTCCTCTTGCCA
CTCAGGACGGCGGCACTTGAGCCATGATCGCTATTTTCCGCCGACCCTGT
GTGGCAGGGGCAGCTCCCACATAGACGGGCTCCCGTACCGAGCAGCAGGG
CCTTTATATGATCAGCTGGCCTGGAACGGCCTCGAGGCCACGAGACTATT
GTCTATGTGGTTCGACTTGAGCAGACTTGGAAATACAGTCTACGCTCTGT
GAGTAATGATCTTTCAAGGATGGTGAAGTGCTGGTAGACAAGGGGATGGT
GGAAGGATTTGATGTGATTGATCGATGAGACTGCTGTGCTCCCAAACATG
TCATTCGTTGTACAGTAACAGTCTCACTCTGATGAATGCCCCGGTGGAAA
TGCATCGGGATTATGTTGTCCAACCGACCGATATCTAGACTGGCGTAGAC
TTTTGTTTCTGGAATTTTCAAGGCTAATTGGTAGTCTGAGTAGGTGC
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Coding sequence (CDS) from alignment at ch6:216632..217878-

>KJC3_007825-T1 ID=KJC3_007825-T1|Name=KJC3_007825-T1|organism=Aspergillus niger KJC3|type=CDS|length=930bp|location=Sequence derived from alignment at ch6:216632..217878- (Aspergillus niger KJC3)
AATTCACCAACAATATCCTCTCAACGAAGGCCGGCAACACATACATCGCC
CAGGCTGGGCGTAACCTGGGCCTGGACAAACTTGTCATTGTCAATCCAGC
CCAGGCCGGAATGGTATCCGACAAAGTCATGGCCAGCGCCGTTGAAGCTA
TTATCGGAGCTGTCTTCATGGACAGCGATGGCTCTGTTGAGTCCGTGCGA
CCTGTCCTGACTATTTTGGGCCTTGGCTGGCCCGCTTGAATGCCTTCATT
TTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAAACCTTATCGGGTACA
TCTTCAATGACCCGAAGCGTGCGATGGAAGCACTAGTCGCTGCTGGGGTT
TACATGCCCGGATTGATCAATCGCACGGATGGTCACAAGCAACTTGCCCT
CGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGCTGGACGGATACGAAG
CCCGAAAGGGCAGAGAATTCACCAACAATATCCTCTCAACGAAGGCCGGC
AACACATACATCGCCCAGGCTGGGCGTAACCTGGGCCTGGACAAACTTGT
CATTGTCAATCCAGCCCAGGCCGGAATGGTATCCGACAAAGTCATGGCCA
GCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACAGCGATGGCTCT
GTTGAGTCCGTGCGACCTGTCCTGACTATTTTGGGCCTTGGCTGGCCCGC
TTGAATGCCTTCATTTTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAA
ACCTTATCGGGTACATCTTCAATGACCCGAAGCGTGCGATGGAAGCACTA
GTCGCTGCTGGGGTTTACATGCCCGGATTGATCAATCGCACGGATGGTCA
CAAGCAACTTGCCCTCGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGC
TGGACGGATACGAAGCCCGAAAGGGCAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007825KJC3_007825Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007825-T1KJC3_007825-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007825-T1.cdsKJC3_007825-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007825-T1.utr3p1KJC3_007825-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007825-T1.exon2KJC3_007825-T1.exon2Aspergillus niger KJC3exon
KJC3_007825-T1.exon1KJC3_007825-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007825-T1.utr5p1KJC3_007825-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.4
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF00636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:216632..217878 -
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