You are here

Home

KJC3_007835-T1, KJC3_007835-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007835-T1
Unique NameKJC3_007835-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:237420..238957-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007835-T1 ID=KJC3_007835-T1|Name=KJC3_007835-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1538bp|location=Sequence derived from alignment at ch6:237420..238957- (Aspergillus niger KJC3)
CCATCACATTGCATCATCTATACAATAGAATCTCATATCCTGTTCCAACG
AGTGAAATCATGACTCAGTGGCCCGATATCACTGTCAAGCCTGCCGAAGG
AGTGTCCTTCTACACCCCAGCGCAATTCCCTCCGGCCGGCACAGCACGCA
ACCCTCAAACGAGCGGACGGCCTATCCCTAACCTCTTCCAGCCTTTGACG
ATCAGGGGCCAGACTTTCCAGAATCGCCTGGGCGTGAGTACTTTCAGCCA
TCCAAGTGTAATCCTTGATACTAACAGCTCCGACAGCTGGCCCCAATGTG
CCAATATAGTGCCGATGATGGACATATGACCCCATGGCATATCGCCCACT
ATGGTGGTATCGCCCAGCGCGGCCCCGGCATGATGATCATTGAAGCCACT
GGCGTTGCGCCTGAGGGGCGCATCACTCCTGGCTGCGTTGGTCTCTGGAA
GGACTCCCAAATTGAACCCATCAGACAAGTCATCGAGTTCGCCCACAGTC
AAGGACAGAAGATCGGAGTTCAGCTGGGCCATGCTGGACGCAAGGCTTCG
ACTCTTCCTCCTTGGTTGGGTGGTGGTGTCGCGACCAACGCAGTGGGCGG
CTGGGTGGACAATGTCAAGGCTCCCAGCGCCATCTCCTTTTCCAACGATG
GCATTACGCCGAAGGCTATGACGAGGGAGGAGATCGACCAGCTGAAGGAG
GCGTGGGTGGCCGCAACAAAGCGCGCCTTGGCTGCTGGTGCTGATTTTAT
CGAGATCCACGCTGCCCACGGTTATCTTCTTTCTTCCTTCTTGAGCCCGT
CTTCGAACCAACGTACTGATGAGTACGGCGGGAGCTTTGAGAACCGCATT
CGATTAGTGCTCGAAATCGCTCAACTTAGCCGCGAGACAGTGGGCCCCCA
CATCCCTGTGTTCCTCCGTGTTTCCGCTACCGACTGGGTTCCCACCGACG
AGCCAGGCTGGAAGGGCGTGGACACAGTGAAATTGGCGGGAGCACTCGCT
GCACAAGGCATGGTGGATTTGATCGACATCAGCAGTGGTGGCATCGCCTC
TGGGCAAAAGATCAAATCGGGTCCTGCGTTCCAGGTTCCATTTGCAGCTG
ATGTGAAGAAGGCTGTGGGCGACAAGTTGCTCGTCGCTGCTGTGGGCATG
ATCAACAATGGCAACCTGGCCGAGCAGATCCTGACAGAAAGCAACTTGGA
TGTTATATTGGTTGGGCGTGCTTTCCAGCGGGATACAGGACTTGCGTGGC
ACTTTGCGAAGGATCTGGATGTTGAGATTGCTATGGCGGCGCAGATCCGT
TGGGGGTTCACCAGTTTCCGAAATGCTTCGGAGTACATCCAGCCTAACTC
GATGAAGGCTTCCATTTTTGAATAGACAGTTGCGATCGTTATATTTTCGG
ATAAATTGATAGACTATAGACAAGAGGCCTTCATTTTCCTCGATACATAT
TAGCACTTTTACATATACTGGCTTCAACTCGGTTTACAGGATTGCTAGCA
TCAAATGACAGGATCAAGATTATGCTCGTTTACACTCC
back to top

Coding sequence (CDS) from alignment at ch6:237420..238957-

>KJC3_007835-T1 ID=KJC3_007835-T1|Name=KJC3_007835-T1|organism=Aspergillus niger KJC3|type=CDS|length=2526bp|location=Sequence derived from alignment at ch6:237420..238957- (Aspergillus niger KJC3)
CTGGCCCCAATGTGCCAATATAGTGCCGATGATGGACATATGACCCCATG
GCATATCGCCCACTATGGTGGTATCGCCCAGCGCGGCCCCGGCATGATGA
TCATTGAAGCCACTGGCGTTGCGCCTGAGGGGCGCATCACTCCTGGCTGC
GTTGGTCTCTGGAAGGACTCCCAAATTGAACCCATCAGACAAGTCATCGA
GTTCGCCCACAGTCAAGGACAGAAGATCGGAGTTCAGCTGGGCCATGCTG
GACGCAAGGCTTCGACTCTTCCTCCTTGGTTGGGTGGTGGTGTCGCGACC
AACGCAGTGGGCGGCTGGGTGGACAATGTCAAGGCTCCCAGCGCCATCTC
CTTTTCCAACGATGGCATTACGCCGAAGGCTATGACGAGGGAGGAGATCG
ACCAGCTGAAGGAGGCGTGGGTGGCCGCAACAAAGCGCGCCTTGGCTGCT
GGTGCTGATTTTATCGAGATCCACGCTGCCCACGGTTATCTTCTTTCTTC
CTTCTTGAGCCCGTCTTCGAACCAACGTACTGATGAGTACGGCGGGAGCT
TTGAGAACCGCATTCGATTAGTGCTCGAAATCGCTCAACTTAGCCGCGAG
ACAGTGGGCCCCCACATCCCTGTGTTCCTCCGTGTTTCCGCTACCGACTG
GGTTCCCACCGACGAGCCAGGCTGGAAGGGCGTGGACACAGTGAAATTGG
CGGGAGCACTCGCTGCACAAGGCATGGTGGATTTGATCGACATCAGCAGT
GGTGGCATCGCCTCTGGGCAAAAGATCAAATCGGGTCCTGCGTTCCAGGT
TCCATTTGCAGCTGATGTGAAGAAGGCTGTGGGCGACAAGTTGCTCGTCG
CTGCTGTGGGCATGATCAACAATGGCAACCTGGCCGAGCAGATCCTGACA
GAAAGCAACTTGGATGTTATATTGGTTGGGCGTGCTTTCCAGCGGGATAC
AGGACTTGCGTGGCACTTTGCGAAGGATCTGGATGTTGAGATTGCTATGG
CGGCGCAGATCCGTTGGGGGTTCACCAGTTTCCGAAATGCTTCGGAGTAC
ATCCAGCCTAACTCGATGAAGGCTTCCATTTTTGAATAGATGACTCAGTG
GCCCGATATCACTGTCAAGCCTGCCGAAGGAGTGTCCTTCTACACCCCAG
CGCAATTCCCTCCGGCCGGCACAGCACGCAACCCTCAAACGAGCGGACGG
CCTATCCCTAACCTCTTCCAGCCTTTGACGATCAGGGGCCAGACTTTCCA
GAATCGCCTGGGCCTGGCCCCAATGTGCCAATATAGTGCCGATGATGGAC
ATATGACCCCATGGCATATCGCCCACTATGGTGGTATCGCCCAGCGCGGC
CCCGGCATGATGATCATTGAAGCCACTGGCGTTGCGCCTGAGGGGCGCAT
CACTCCTGGCTGCGTTGGTCTCTGGAAGGACTCCCAAATTGAACCCATCA
GACAAGTCATCGAGTTCGCCCACAGTCAAGGACAGAAGATCGGAGTTCAG
CTGGGCCATGCTGGACGCAAGGCTTCGACTCTTCCTCCTTGGTTGGGTGG
TGGTGTCGCGACCAACGCAGTGGGCGGCTGGGTGGACAATGTCAAGGCTC
CCAGCGCCATCTCCTTTTCCAACGATGGCATTACGCCGAAGGCTATGACG
AGGGAGGAGATCGACCAGCTGAAGGAGGCGTGGGTGGCCGCAACAAAGCG
CGCCTTGGCTGCTGGTGCTGATTTTATCGAGATCCACGCTGCCCACGGTT
ATCTTCTTTCTTCCTTCTTGAGCCCGTCTTCGAACCAACGTACTGATGAG
TACGGCGGGAGCTTTGAGAACCGCATTCGATTAGTGCTCGAAATCGCTCA
ACTTAGCCGCGAGACAGTGGGCCCCCACATCCCTGTGTTCCTCCGTGTTT
CCGCTACCGACTGGGTTCCCACCGACGAGCCAGGCTGGAAGGGCGTGGAC
ACAGTGAAATTGGCGGGAGCACTCGCTGCACAAGGCATGGTGGATTTGAT
CGACATCAGCAGTGGTGGCATCGCCTCTGGGCAAAAGATCAAATCGGGTC
CTGCGTTCCAGGTTCCATTTGCAGCTGATGTGAAGAAGGCTGTGGGCGAC
AAGTTGCTCGTCGCTGCTGTGGGCATGATCAACAATGGCAACCTGGCCGA
GCAGATCCTGACAGAAAGCAACTTGGATGTTATATTGGTTGGGCGTGCTT
TCCAGCGGGATACAGGACTTGCGTGGCACTTTGCGAAGGATCTGGATGTT
GAGATTGCTATGGCGGCGCAGATCCGTTGGGGGTTCACCAGTTTCCGAAA
TGCTTCGGAGTACATCCAGCCTAACTCGATGAAGGCTTCCATTTTTGAAT
AGATGACTCAGTGGCCCGATATCACTGTCAAGCCTGCCGAAGGAGTGTCC
TTCTACACCCCAGCGCAATTCCCTCCGGCCGGCACAGCACGCAACCCTCA
AACGAGCGGACGGCCTATCCCTAACCTCTTCCAGCCTTTGACGATCAGGG
GCCAGACTTTCCAGAATCGCCTGGGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
GO:0010181FMN binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007835KJC3_007835Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007835-T1KJC3_007835-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007835-T1.cdsKJC3_007835-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007835-T1.utr3p1KJC3_007835-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007835-T1.exon2KJC3_007835-T1.exon2Aspergillus niger KJC3exon
KJC3_007835-T1.exon1KJC3_007835-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007835-T1.utr5p1KJC3_007835-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.4
NoteSMCOG1217:NADH:flavin oxidoreductase/NADH oxidase
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001155
DBxrefPFAM:PF00724
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:237420..238957 -
Powered by Drupal