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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:257705..259786- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007843-T1 ID=KJC3_007843-T1|Name=KJC3_007843-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2082bp|location=Sequence derived from alignment at ch6:257705..259786- (Aspergillus niger KJC3)
GTGGTCGTCCTACATCTACATCCTTGTTGACCCTCATACCCCTCCATCAA
TTGAGACACATGTCAATTCATTCTGGAGGTTGTGCAACCACGATATGACC
ATGTCCCATCACGTCCTGTCCCAGCTTTCAGTTCTCCAGGCCGCCGTGGG
CGCCGACTGTGAGATCCTGCGCGACCCCCTAGACGCACACTTTCAGCAAC
GTCTAGCTCGATGGACTGATATTGACCGGAAGGTTCCGGCTGCCATTGTC
CTTCCTCGGACGGAGGATGGCTGTCTGAAGACGGTAAGATGAACCTTGCA
GGTACACGGACACAGGGAATGGCAATGACCCTGGACATAGGTGCAATGGG
CCCTCAAATTAAGCATTCCATTTGTGCCCAAAAGTGGTGGTCATAGTCCA
TGGTCAACCATTGGAACAGAGGGAATCATTATCGATCTCAGCTTGTATTC
TGATGTTCGCGTTGATGCGGGTGCAAGAACAGCAACCGTGATTGGCAGTG
TTCTGGCCAAGGAAGTGTCTGTGCGTCTAGCAGAAGCGGGTCTTTTCACA
GGTATGGCGTTCTAATTACCTATTGCCTTTGCCTGGACCTCGTCTAATGT
CCATCCTGACACATCAATCACACAGCACTCGGAAACGGCAACAGCGTTGG
TGCCATCCCATACCTGCTTGGTGGCGGTGGCTCGATCACCAATTCCATCA
CCGGCTTCGGATCGGATCAGATTCTAGCGGCGCGCGTAATCACAGCAAAG
GGGGAGCTGATCGAAGTTACAGAAGAAACACACCCAGACCTACTCTGGGC
AGTAAAAGGAGCTGGCCAATTCTTTGGCCTCGTCACACAGCTCACCGTTC
GTGCGCACCCTTTGTCGCTACTGCGGAAACAACAAGGCCTGATCTGGGTG
GGGGGCTTTATCTTCCCACTTGATCGGGCGGTGGAGGTGGCTCGAGTTAT
GAAGCAGATCATGGATGATCCCCAGCACGCGACGGCGGGCCTCATGATGA
TCATTGCCCCGCCACCCGCGCGCATTCCATCTCTGGTGATTTCCGCCCGC
TATACCGGTGATGAAGCTCCCGAGGTGCCATTCAAAGCTCTGTATGATCT
TCAGCCCACCGCCACAACGGGAAGAGAGCTACCCATTCAGAATGTCAATG
ATGAGCGAGAAGCGCTGTGCGCGAAAGGCGACTTCAAGAGATTCGGTATC
GTAGGGTTGCATGAATTTTGTAACGACAGATTTGTGCAGGCCATCGAAGT
CTGGAAGAAATTGATCCATGAGTGCCCTGATGCCAATAACTCAGCTTTCA
ATCTACAGTGGGACTCACGACCAGTTAAGACGCCCGAGAAGGAGTCTGCC
ATGTCGTCGCATGATATCCGCTACTGGCAGTAGGTTTTCTTGGCTCCATT
TGACGTTGCGATGCTAACAGTGAATGTGTTGAAGAGTCAATATTATCTGG
CATACAGATGAGAAGAACAGGCGCAAGGTTGACGAGTACAACGATGAGTG
CGTTGCCTTGATGAGGGGGCCGGACGAAACACGGTACATTGATTTCCAGA
ACGCGACTCGGACGGGTCCTATCCAGCGTCGGTATCGGGGAGAGGCTCGG
CTAGAGAAGCTTCGACAGCTCAAAAGAGAATGGGATCCTCGGGGAGTGTT
TACCAGGCAATTGCTGGATATGGATTGATTCCAAACAATGTAACGAATGG
GGCTGGTTATAAAGACGGGCCGTTGTGTCCGATGTCCAGAATTGAGGCTT
TATGATACTCATTGACAATTGCACTGCACTGGGATTGAACCTCCAGAGAT
ATCTTCCATCGACGTAGCCGTGAGCAACACAGGAATGAGAGATGGGTCGC
ATGTCTCAAACATGCATACTGTCGGCCTTGCGTGTCTTGTAGCCACGGCC
AATCTATCCGCGGCGACCCGCGTCTTCGCAGAGGCTAGGCATCCAACAAG
CTCTGTGAACCTCGAAAAGGCATCATCATTGTGTGAAATGCAGCCTCTCA
GGCACCAGAAAATCCACCAGCCCAGTCAGGAAGGTGAGCGATTAGGACCA
CGGAAAATAAGAAACAAGAATCAGCTGGCCGG back to topCoding sequence (CDS) from alignment at ch6:257705..259786- >KJC3_007843-T1 ID=KJC3_007843-T1|Name=KJC3_007843-T1|organism=Aspergillus niger KJC3|type=CDS|length=5592bp|location=Sequence derived from alignment at ch6:257705..259786- (Aspergillus niger KJC3)
AGTCAATATTATCTGGCATACAGATGAGAAGAACAGGCGCAAGGTTGACG
AGTACAACGATGAGTGCGTTGCCTTGATGAGGGGGCCGGACGAAACACGG
TACATTGATTTCCAGAACGCGACTCGGACGGGTCCTATCCAGCGTCGGTA
TCGGGGAGAGGCTCGGCTAGAGAAGCTTCGACAGCTCAAAAGAGAATGGG
ATCCTCGGGGAGTGTTTACCAGGCAATTGCTGGATATGGATTGACACTCG
GAAACGGCAACAGCGTTGGTGCCATCCCATACCTGCTTGGTGGCGGTGGC
TCGATCACCAATTCCATCACCGGCTTCGGATCGGATCAGATTCTAGCGGC
GCGCGTAATCACAGCAAAGGGGGAGCTGATCGAAGTTACAGAAGAAACAC
ACCCAGACCTACTCTGGGCAGTAAAAGGAGCTGGCCAATTCTTTGGCCTC
GTCACACAGCTCACCGTTCGTGCGCACCCTTTGTCGCTACTGCGGAAACA
ACAAGGCCTGATCTGGGTGGGGGGCTTTATCTTCCCACTTGATCGGGCGG
TGGAGGTGGCTCGAGTTATGAAGCAGATCATGGATGATCCCCAGCACGCG
ACGGCGGGCCTCATGATGATCATTGCCCCGCCACCCGCGCGCATTCCATC
TCTGGTGATTTCCGCCCGCTATACCGGTGATGAAGCTCCCGAGGTGCCAT
TCAAAGCTCTGTATGATCTTCAGCCCACCGCCACAACGGGAAGAGAGCTA
CCCATTCAGAATGTCAATGATGAGCGAGAAGCGCTGTGCGCGAAAGGCGA
CTTCAAGAGATTCGGTATCGTAGGGTTGCATGAATTTTGTAACGACAGAT
TTGTGCAGGCCATCGAAGTCTGGAAGAAATTGATCCATGAGTGCCCTGAT
GCCAATAACTCAGCTTTCAATCTACAGTGGGACTCACGACCAGTTAAGAC
GCCCGAGAAGGAGTCTGCCATGTCGTCGCATGATATCCGCTACTGGCAGT
GCAATGGGCCCTCAAATTAAGCATTCCATTTGTGCCCAAAAGTGGTGGTC
ATAGTCCATGGTCAACCATTGGAACAGAGGGAATCATTATCGATCTCAGC
TTGTATTCTGATGTTCGCGTTGATGCGGGTGCAAGAACAGCAACCGTGAT
TGGCAGTGTTCTGGCCAAGGAAGTGTCTGTGCGTCTAGCAGAAGCGGGTC
TTTTCACAGATGACCATGTCCCATCACGTCCTGTCCCAGCTTTCAGTTCT
CCAGGCCGCCGTGGGCGCCGACTGTGAGATCCTGCGCGACCCCCTAGACG
CACACTTTCAGCAACGTCTAGCTCGATGGACTGATATTGACCGGAAGGTT
CCGGCTGCCATTGTCCTTCCTCGGACGGAGGATGGCTGTCTGAAGACGAG
TCAATATTATCTGGCATACAGATGAGAAGAACAGGCGCAAGGTTGACGAG
TACAACGATGAGTGCGTTGCCTTGATGAGGGGGCCGGACGAAACACGGTA
CATTGATTTCCAGAACGCGACTCGGACGGGTCCTATCCAGCGTCGGTATC
GGGGAGAGGCTCGGCTAGAGAAGCTTCGACAGCTCAAAAGAGAATGGGAT
CCTCGGGGAGTGTTTACCAGGCAATTGCTGGATATGGATTGACACTCGGA
AACGGCAACAGCGTTGGTGCCATCCCATACCTGCTTGGTGGCGGTGGCTC
GATCACCAATTCCATCACCGGCTTCGGATCGGATCAGATTCTAGCGGCGC
GCGTAATCACAGCAAAGGGGGAGCTGATCGAAGTTACAGAAGAAACACAC
CCAGACCTACTCTGGGCAGTAAAAGGAGCTGGCCAATTCTTTGGCCTCGT
CACACAGCTCACCGTTCGTGCGCACCCTTTGTCGCTACTGCGGAAACAAC
AAGGCCTGATCTGGGTGGGGGGCTTTATCTTCCCACTTGATCGGGCGGTG
GAGGTGGCTCGAGTTATGAAGCAGATCATGGATGATCCCCAGCACGCGAC
GGCGGGCCTCATGATGATCATTGCCCCGCCACCCGCGCGCATTCCATCTC
TGGTGATTTCCGCCCGCTATACCGGTGATGAAGCTCCCGAGGTGCCATTC
AAAGCTCTGTATGATCTTCAGCCCACCGCCACAACGGGAAGAGAGCTACC
CATTCAGAATGTCAATGATGAGCGAGAAGCGCTGTGCGCGAAAGGCGACT
TCAAGAGATTCGGTATCGTAGGGTTGCATGAATTTTGTAACGACAGATTT
GTGCAGGCCATCGAAGTCTGGAAGAAATTGATCCATGAGTGCCCTGATGC
CAATAACTCAGCTTTCAATCTACAGTGGGACTCACGACCAGTTAAGACGC
CCGAGAAGGAGTCTGCCATGTCGTCGCATGATATCCGCTACTGGCAGTGC
AATGGGCCCTCAAATTAAGCATTCCATTTGTGCCCAAAAGTGGTGGTCAT
AGTCCATGGTCAACCATTGGAACAGAGGGAATCATTATCGATCTCAGCTT
GTATTCTGATGTTCGCGTTGATGCGGGTGCAAGAACAGCAACCGTGATTG
GCAGTGTTCTGGCCAAGGAAGTGTCTGTGCGTCTAGCAGAAGCGGGTCTT
TTCACAGATGACCATGTCCCATCACGTCCTGTCCCAGCTTTCAGTTCTCC
AGGCCGCCGTGGGCGCCGACTGTGAGATCCTGCGCGACCCCCTAGACGCA
CACTTTCAGCAACGTCTAGCTCGATGGACTGATATTGACCGGAAGGTTCC
GGCTGCCATTGTCCTTCCTCGGACGGAGGATGGCTGTCTGAAGACGAGTC
AATATTATCTGGCATACAGATGAGAAGAACAGGCGCAAGGTTGACGAGTA
CAACGATGAGTGCGTTGCCTTGATGAGGGGGCCGGACGAAACACGGTACA
TTGATTTCCAGAACGCGACTCGGACGGGTCCTATCCAGCGTCGGTATCGG
GGAGAGGCTCGGCTAGAGAAGCTTCGACAGCTCAAAAGAGAATGGGATCC
TCGGGGAGTGTTTACCAGGCAATTGCTGGATATGGATTGACACTCGGAAA
CGGCAACAGCGTTGGTGCCATCCCATACCTGCTTGGTGGCGGTGGCTCGA
TCACCAATTCCATCACCGGCTTCGGATCGGATCAGATTCTAGCGGCGCGC
GTAATCACAGCAAAGGGGGAGCTGATCGAAGTTACAGAAGAAACACACCC
AGACCTACTCTGGGCAGTAAAAGGAGCTGGCCAATTCTTTGGCCTCGTCA
CACAGCTCACCGTTCGTGCGCACCCTTTGTCGCTACTGCGGAAACAACAA
GGCCTGATCTGGGTGGGGGGCTTTATCTTCCCACTTGATCGGGCGGTGGA
GGTGGCTCGAGTTATGAAGCAGATCATGGATGATCCCCAGCACGCGACGG
CGGGCCTCATGATGATCATTGCCCCGCCACCCGCGCGCATTCCATCTCTG
GTGATTTCCGCCCGCTATACCGGTGATGAAGCTCCCGAGGTGCCATTCAA
AGCTCTGTATGATCTTCAGCCCACCGCCACAACGGGAAGAGAGCTACCCA
TTCAGAATGTCAATGATGAGCGAGAAGCGCTGTGCGCGAAAGGCGACTTC
AAGAGATTCGGTATCGTAGGGTTGCATGAATTTTGTAACGACAGATTTGT
GCAGGCCATCGAAGTCTGGAAGAAATTGATCCATGAGTGCCCTGATGCCA
ATAACTCAGCTTTCAATCTACAGTGGGACTCACGACCAGTTAAGACGCCC
GAGAAGGAGTCTGCCATGTCGTCGCATGATATCCGCTACTGGCAGTGCAA
TGGGCCCTCAAATTAAGCATTCCATTTGTGCCCAAAAGTGGTGGTCATAG
TCCATGGTCAACCATTGGAACAGAGGGAATCATTATCGATCTCAGCTTGT
ATTCTGATGTTCGCGTTGATGCGGGTGCAAGAACAGCAACCGTGATTGGC
AGTGTTCTGGCCAAGGAAGTGTCTGTGCGTCTAGCAGAAGCGGGTCTTTT
CACAGATGACCATGTCCCATCACGTCCTGTCCCAGCTTTCAGTTCTCCAG
GCCGCCGTGGGCGCCGACTGTGAGATCCTGCGCGACCCCCTAGACGCACA
CTTTCAGCAACGTCTAGCTCGATGGACTGATATTGACCGGAAGGTTCCGG
CTGCCATTGTCCTTCCTCGGACGGAGGATGGCTGTCTGAAGACGAGTCAA
TATTATCTGGCATACAGATGAGAAGAACAGGCGCAAGGTTGACGAGTACA
ACGATGAGTGCGTTGCCTTGATGAGGGGGCCGGACGAAACACGGTACATT
GATTTCCAGAACGCGACTCGGACGGGTCCTATCCAGCGTCGGTATCGGGG
AGAGGCTCGGCTAGAGAAGCTTCGACAGCTCAAAAGAGAATGGGATCCTC
GGGGAGTGTTTACCAGGCAATTGCTGGATATGGATTGACACTCGGAAACG
GCAACAGCGTTGGTGCCATCCCATACCTGCTTGGTGGCGGTGGCTCGATC
ACCAATTCCATCACCGGCTTCGGATCGGATCAGATTCTAGCGGCGCGCGT
AATCACAGCAAAGGGGGAGCTGATCGAAGTTACAGAAGAAACACACCCAG
ACCTACTCTGGGCAGTAAAAGGAGCTGGCCAATTCTTTGGCCTCGTCACA
CAGCTCACCGTTCGTGCGCACCCTTTGTCGCTACTGCGGAAACAACAAGG
CCTGATCTGGGTGGGGGGCTTTATCTTCCCACTTGATCGGGCGGTGGAGG
TGGCTCGAGTTATGAAGCAGATCATGGATGATCCCCAGCACGCGACGGCG
GGCCTCATGATGATCATTGCCCCGCCACCCGCGCGCATTCCATCTCTGGT
GATTTCCGCCCGCTATACCGGTGATGAAGCTCCCGAGGTGCCATTCAAAG
CTCTGTATGATCTTCAGCCCACCGCCACAACGGGAAGAGAGCTACCCATT
CAGAATGTCAATGATGAGCGAGAAGCGCTGTGCGCGAAAGGCGACTTCAA
GAGATTCGGTATCGTAGGGTTGCATGAATTTTGTAACGACAGATTTGTGC
AGGCCATCGAAGTCTGGAAGAAATTGATCCATGAGTGCCCTGATGCCAAT
AACTCAGCTTTCAATCTACAGTGGGACTCACGACCAGTTAAGACGCCCGA
GAAGGAGTCTGCCATGTCGTCGCATGATATCCGCTACTGGCAGTGCAATG
GGCCCTCAAATTAAGCATTCCATTTGTGCCCAAAAGTGGTGGTCATAGTC
CATGGTCAACCATTGGAACAGAGGGAATCATTATCGATCTCAGCTTGTAT
TCTGATGTTCGCGTTGATGCGGGTGCAAGAACAGCAACCGTGATTGGCAG
TGTTCTGGCCAAGGAAGTGTCTGTGCGTCTAGCAGAAGCGGGTCTTTTCA
CAGATGACCATGTCCCATCACGTCCTGTCCCAGCTTTCAGTTCTCCAGGC
CGCCGTGGGCGCCGACTGTGAGATCCTGCGCGACCCCCTAGACGCACACT
TTCAGCAACGTCTAGCTCGATGGACTGATATTGACCGGAAGGTTCCGGCT
GCCATTGTCCTTCCTCGGACGGAGGATGGCTGTCTGAAGACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007843-T1.utr3p1 | KJC3_007843-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007843-T1.utr5p1 | KJC3_007843-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:AA7 |
| DBxref | InterPro:IPR036318 |
| DBxref | InterPro:IPR016166 |
| DBxref | InterPro:IPR016167 |
| DBxref | InterPro:IPR016169 |
| DBxref | InterPro:IPR006094 |
| DBxref | PFAM:PF01565 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:257705..259786 - |
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