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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:261449..263689+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007844-T1 ID=KJC3_007844-T1|Name=KJC3_007844-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2241bp|location=Sequence derived from alignment at ch6:261449..263689+ (Aspergillus niger KJC3)
TGCCAGTCTTCGGATGAGCTCTTCGCCCCACAGAAGTCATACCATATTGC
GTGCACTGCCTTCAAATAACAAGCTACTGTGAAAAACAAAACCTTAAGCA
TACTCTAAACAGCCTAACCGGTAAATAGCTATCAAGGGCTTGAATACTCT
GTGATCTGCAGTTGATGCTGGAGCAATCCAAGACAGGAGAAACCTTAAGA
CCCATAGGCGGATAATTTCTCCCCGCGATTATCGCTCAGACACTCCCCTC
CAGTCGGTTATATTGGAACGCGTGTTGCGCAAATGAACGCATGTCTGTGT
TGCAGTTCCCCGCCTGAAGAACCTGACAATCAAGGCTTATCCACGGACAT
GTCGGCGAATTGCAGACAACGGCTCTGAAATTGGCTTTGCGCTACTGTTT
TCATTGGCCACGCCCTCAGGAACTGGCTTGATCATGCGGTTACCAGCAGG
GGTATCGAGGATGTGCATTCACGATGCAGAATCTCGGGAGGGTCGAAGTC
AAGCATTTATAAGGGCACTTGCAGAATACCCTGAGGGAACAAATCGAATC
AACTTCAAACTGCACCTTGTACAATGCATCTAGGCAACAGCTTGAGTTTG
CTCTGCCTCGCAGCACCCGGCCTCGTCGCCTCTATTTCTTCCTCTCCTCT
ATCCACCTCGGGCCGATGGATCGTCGACACCGACGGAAACAATGTCACCT
ACGCAGGGGTCAACTGGCCCGGTGCTGAGGTGGCCATGTTGCCAGAAGGT
CTGCAGTATCAGTCCATCGAGTATATCGTCGGCAAGATCAAGGATTTGGG
TATGAACGTCATCAGGCTTACCTTTGCCATTGAGATGATCGATGACATCT
ACGAGACTGGAGCGGACGTACCGATTAAGACGTCATTGATTAACGCTCTG
GGTGAGACAAATGGAACCAAGATCTACGACGATATCGTCAGTAATAACCC
GCAATTTGGGGAGAATACTACACGACTAGAGGTGAGCCATATATTTCAAC
GCTTAGTGTCTTGTCTTCAAATATTGACGGAGTTTAGGTCTACGATGCAG
TAGCCAATGAATGCTACAGTCAGGGCATTTACGTACATCTGGACAACCAC
GTCTCCAAAGCAAGTTGGTGTTGCTCGACCACCGACGGAAATGCCTGGTT
CGGAGACACCTACTTCAACGTGAGCAATTGGCATAGGGGGTGGAAATATA
TGGCTGAGCACGTAAGCAGCGTAGTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTATCTCCAATCCTCACAGCTAACGTAACTCCAAAACAGGTCAAATCC
CTGCCAGCCGTAAAAAGCATCGGTATGCGCAATGAACTCCGCAGCCCAGA
CGACAACACCACACTCGCAGACGACACCTACAATTGGGAGACATGGTACA
GCAACATGGTCGAGAACGCGAACCAAGTGCACTCCGTCAATTCAGACCTA
CTTCTATTCTTCTCAGGTCTCAACTACGATGTCACACTCTCACCGATCCC
GACAGCCTCAGATTTAGGCGACGGCACGGTCTTCAAGAAGAGCGATTTTG
ATTTCGCCGATAAGATCGTACTAGAGCTTCACAACTATGACTCCTCTGCT
ACCAGCTGTAGTAGTCTGTCATCTAGCTTGCTGAGCGACGGCTTCGATGC
TCTAGAGACGAATGATTCGAGCATTGTAAATGTGCTTCCGGTCGTAATGA
CCGAGTTCGGATACGCGCAGGATGATACCACCTATACAGAAGTTTATGCC
TCGTGCTTGAGGGAATGGTTGCCTAGTGTGCATGCTGGATGGATGATTTG
GGTGCTTTCGGGAAGTTATTATGTCCGAGAGGGAATACAGGATTATGATG
AGACTTGGGGTAAATTTACCTGTTCTGGTCCTTGAAGTGCAGAGTTATGC
AGAGTTCGTGCAAAGCGACTAACTATGATTACTAGGCCTACTCGATCATA
CGTGGTCTGGATGGCGATCAACCGAGGCAATTGATAATGGCATCATTCCT
ATGGTCAACGCGAGTCTGGGGTAGGTTTCGGGTACTGACCGACCTCGTCG
GTATATTGGAGGTGTCCCTGTGATGGAGGGCTCAAAACTTGGTCCTGCGA
GCATCCAGCAATGGCAATCCACTTATTTACCGATTGGCTCTACACAATAG
GTAGTTTTCTATATCCCGCCCACAAGGTACTGCACAACAACATGTCCTAG
AAATAAAGTAGGTATTTTCGACATCTTATTTTTTAGCCATG back to topCoding sequence (CDS) from alignment at ch6:261449..263689+ >KJC3_007844-T1 ID=KJC3_007844-T1|Name=KJC3_007844-T1|organism=Aspergillus niger KJC3|type=CDS|length=4956bp|location=Sequence derived from alignment at ch6:261449..263689+ (Aspergillus niger KJC3)
ATGCATCTAGGCAACAGCTTGAGTTTGCTCTGCCTCGCAGCACCCGGCCT
CGTCGCCTCTATTTCTTCCTCTCCTCTATCCACCTCGGGCCGATGGATCG
TCGACACCGACGGAAACAATGTCACCTACGCAGGGGTCAACTGGCCCGGT
GCTGAGGTGGCCATGTTGCCAGAAGGTCTGCAGTATCAGTCCATCGAGTA
TATCGTCGGCAAGATCAAGGATTTGGGTATGAACGTCATCAGGCTTACCT
TTGCCATTGAGATGATCGATGACATCTACGAGACTGGAGCGGACGTACCG
ATTAAGACGTCATTGATTAACGCTCTGGGTGAGACAAATGGAACCAAGAT
CTACGACGATATCGTCAGTAATAACCCGCAATTTGGGGAGAATACTACAC
GACTAGAGGTCTACGATGCAGTAGCCAATGAATGCTACAGTCAGGGCATT
TACGTACATCTGGACAACCACGTCTCCAAAGCAAGTTGGTGTTGCTCGAC
CACCGACGGAAATGCCTGGTTCGGAGACACCTACTTCAACGTGAGCAATT
GGCATAGGGGGTGGAAATATATGGCTGAGCACGTCAAATCCCTGCCAGCC
GTAAAAAGCATCGGTATGCGCAATGAACTCCGCAGCCCAGACGACAACAC
CACACTCGCAGACGACACCTACAATTGGGAGACATGGTACAGCAACATGG
TCGAGAACGCGAACCAAGTGCACTCCGTCAATTCAGACCTACTTCTATTC
TTCTCAGGTCTCAACTACGATGTCACACTCTCACCGATCCCGACAGCCTC
AGATTTAGGCGACGGCACGGTCTTCAAGAAGAGCGATTTTGATTTCGCCG
ATAAGATCGTACTAGAGCTTCACAACTATGACTCCTCTGCTACCAGCTGT
AGTAGTCTGTCATCTAGCTTGCTGAGCGACGGCTTCGATGCTCTAGAGAC
GAATGATTCGAGCATTGTAAATGTGCTTCCGGTCGTAATGACCGAGTTCG
GATACGCGCAGGATGATACCACCTATACAGAAGTTTATGCCTCGTGCTTG
AGGGAATGGTTGCCTAGTGTGCATGCTGGATGGATGATTTGGGTGCTTTC
GGGAAGTTATTATGTCCGAGAGGGAATACAGGATTATGATGAGACTTGGG
GCCTACTCGATCATACGTGGTCTGGATGGCGATCAACCGAGGCAATTGAT
AATGGCATCATTCCTATGGTCAACGCGAGTCTGGGGTAGATGCATCTAGG
CAACAGCTTGAGTTTGCTCTGCCTCGCAGCACCCGGCCTCGTCGCCTCTA
TTTCTTCCTCTCCTCTATCCACCTCGGGCCGATGGATCGTCGACACCGAC
GGAAACAATGTCACCTACGCAGGGGTCAACTGGCCCGGTGCTGAGGTGGC
CATGTTGCCAGAAGGTCTGCAGTATCAGTCCATCGAGTATATCGTCGGCA
AGATCAAGGATTTGGGTATGAACGTCATCAGGCTTACCTTTGCCATTGAG
ATGATCGATGACATCTACGAGACTGGAGCGGACGTACCGATTAAGACGTC
ATTGATTAACGCTCTGGGTGAGACAAATGGAACCAAGATCTACGACGATA
TCGTCAGTAATAACCCGCAATTTGGGGAGAATACTACACGACTAGAGGTC
TACGATGCAGTAGCCAATGAATGCTACAGTCAGGGCATTTACGTACATCT
GGACAACCACGTCTCCAAAGCAAGTTGGTGTTGCTCGACCACCGACGGAA
ATGCCTGGTTCGGAGACACCTACTTCAACGTGAGCAATTGGCATAGGGGG
TGGAAATATATGGCTGAGCACGTCAAATCCCTGCCAGCCGTAAAAAGCAT
CGGTATGCGCAATGAACTCCGCAGCCCAGACGACAACACCACACTCGCAG
ACGACACCTACAATTGGGAGACATGGTACAGCAACATGGTCGAGAACGCG
AACCAAGTGCACTCCGTCAATTCAGACCTACTTCTATTCTTCTCAGGTCT
CAACTACGATGTCACACTCTCACCGATCCCGACAGCCTCAGATTTAGGCG
ACGGCACGGTCTTCAAGAAGAGCGATTTTGATTTCGCCGATAAGATCGTA
CTAGAGCTTCACAACTATGACTCCTCTGCTACCAGCTGTAGTAGTCTGTC
ATCTAGCTTGCTGAGCGACGGCTTCGATGCTCTAGAGACGAATGATTCGA
GCATTGTAAATGTGCTTCCGGTCGTAATGACCGAGTTCGGATACGCGCAG
GATGATACCACCTATACAGAAGTTTATGCCTCGTGCTTGAGGGAATGGTT
GCCTAGTGTGCATGCTGGATGGATGATTTGGGTGCTTTCGGGAAGTTATT
ATGTCCGAGAGGGAATACAGGATTATGATGAGACTTGGGGCCTACTCGAT
CATACGTGGTCTGGATGGCGATCAACCGAGGCAATTGATAATGGCATCAT
TCCTATGGTCAACGCGAGTCTGGGGTAGATGCATCTAGGCAACAGCTTGA
GTTTGCTCTGCCTCGCAGCACCCGGCCTCGTCGCCTCTATTTCTTCCTCT
CCTCTATCCACCTCGGGCCGATGGATCGTCGACACCGACGGAAACAATGT
CACCTACGCAGGGGTCAACTGGCCCGGTGCTGAGGTGGCCATGTTGCCAG
AAGGTCTGCAGTATCAGTCCATCGAGTATATCGTCGGCAAGATCAAGGAT
TTGGGTATGAACGTCATCAGGCTTACCTTTGCCATTGAGATGATCGATGA
CATCTACGAGACTGGAGCGGACGTACCGATTAAGACGTCATTGATTAACG
CTCTGGGTGAGACAAATGGAACCAAGATCTACGACGATATCGTCAGTAAT
AACCCGCAATTTGGGGAGAATACTACACGACTAGAGGTCTACGATGCAGT
AGCCAATGAATGCTACAGTCAGGGCATTTACGTACATCTGGACAACCACG
TCTCCAAAGCAAGTTGGTGTTGCTCGACCACCGACGGAAATGCCTGGTTC
GGAGACACCTACTTCAACGTGAGCAATTGGCATAGGGGGTGGAAATATAT
GGCTGAGCACGTCAAATCCCTGCCAGCCGTAAAAAGCATCGGTATGCGCA
ATGAACTCCGCAGCCCAGACGACAACACCACACTCGCAGACGACACCTAC
AATTGGGAGACATGGTACAGCAACATGGTCGAGAACGCGAACCAAGTGCA
CTCCGTCAATTCAGACCTACTTCTATTCTTCTCAGGTCTCAACTACGATG
TCACACTCTCACCGATCCCGACAGCCTCAGATTTAGGCGACGGCACGGTC
TTCAAGAAGAGCGATTTTGATTTCGCCGATAAGATCGTACTAGAGCTTCA
CAACTATGACTCCTCTGCTACCAGCTGTAGTAGTCTGTCATCTAGCTTGC
TGAGCGACGGCTTCGATGCTCTAGAGACGAATGATTCGAGCATTGTAAAT
GTGCTTCCGGTCGTAATGACCGAGTTCGGATACGCGCAGGATGATACCAC
CTATACAGAAGTTTATGCCTCGTGCTTGAGGGAATGGTTGCCTAGTGTGC
ATGCTGGATGGATGATTTGGGTGCTTTCGGGAAGTTATTATGTCCGAGAG
GGAATACAGGATTATGATGAGACTTGGGGCCTACTCGATCATACGTGGTC
TGGATGGCGATCAACCGAGGCAATTGATAATGGCATCATTCCTATGGTCA
ACGCGAGTCTGGGGTAGATGCATCTAGGCAACAGCTTGAGTTTGCTCTGC
CTCGCAGCACCCGGCCTCGTCGCCTCTATTTCTTCCTCTCCTCTATCCAC
CTCGGGCCGATGGATCGTCGACACCGACGGAAACAATGTCACCTACGCAG
GGGTCAACTGGCCCGGTGCTGAGGTGGCCATGTTGCCAGAAGGTCTGCAG
TATCAGTCCATCGAGTATATCGTCGGCAAGATCAAGGATTTGGGTATGAA
CGTCATCAGGCTTACCTTTGCCATTGAGATGATCGATGACATCTACGAGA
CTGGAGCGGACGTACCGATTAAGACGTCATTGATTAACGCTCTGGGTGAG
ACAAATGGAACCAAGATCTACGACGATATCGTCAGTAATAACCCGCAATT
TGGGGAGAATACTACACGACTAGAGGTCTACGATGCAGTAGCCAATGAAT
GCTACAGTCAGGGCATTTACGTACATCTGGACAACCACGTCTCCAAAGCA
AGTTGGTGTTGCTCGACCACCGACGGAAATGCCTGGTTCGGAGACACCTA
CTTCAACGTGAGCAATTGGCATAGGGGGTGGAAATATATGGCTGAGCACG
TCAAATCCCTGCCAGCCGTAAAAAGCATCGGTATGCGCAATGAACTCCGC
AGCCCAGACGACAACACCACACTCGCAGACGACACCTACAATTGGGAGAC
ATGGTACAGCAACATGGTCGAGAACGCGAACCAAGTGCACTCCGTCAATT
CAGACCTACTTCTATTCTTCTCAGGTCTCAACTACGATGTCACACTCTCA
CCGATCCCGACAGCCTCAGATTTAGGCGACGGCACGGTCTTCAAGAAGAG
CGATTTTGATTTCGCCGATAAGATCGTACTAGAGCTTCACAACTATGACT
CCTCTGCTACCAGCTGTAGTAGTCTGTCATCTAGCTTGCTGAGCGACGGC
TTCGATGCTCTAGAGACGAATGATTCGAGCATTGTAAATGTGCTTCCGGT
CGTAATGACCGAGTTCGGATACGCGCAGGATGATACCACCTATACAGAAG
TTTATGCCTCGTGCTTGAGGGAATGGTTGCCTAGTGTGCATGCTGGATGG
ATGATTTGGGTGCTTTCGGGAAGTTATTATGTCCGAGAGGGAATACAGGA
TTATGATGAGACTTGGGGCCTACTCGATCATACGTGGTCTGGATGGCGAT
CAACCGAGGCAATTGATAATGGCATCATTCCTATGGTCAACGCGAGTCTG
GGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007844-T1.utr5p1 | KJC3_007844-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007844-T1.utr3p1 | KJC3_007844-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-23) |
| Note | CAZy:GH5_51 |
| Note | CAZy:GH5_24 |
| Note | CAZy:GH5 |
| Note | CAZy:GH5_11 |
| Note | CAZy:GH5_16 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001547 |
| DBxref | PFAM:PF00150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:261449..263689 + |
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